Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400057174
CDS Infomation

pacid=37431278 polypeptide=PGSC0003DMP400038453 locus=PGSC0003DMG400022211 ID=PGSC0003DMT400057174.v4.03 annot-version=v4.03
Sequence

ATGGAGGCGGCCAGTTTCACTTCTGCTTCATCAACGACGACACCGTTTTCATCTTATTCC
TCCACTTCTCAATCTCTTCGTTTCCTACGTTACAAGCCTAATGCGAAACCTCTGAATTAC
AAATCTTCCAGAAGCTTCTCAGTCCGCGCTTCCGCCACCAGTGCCGATGATTCTGTGGTA
ACTGTACTTGATTATGGTGCTGGCAATGTGCGGAGTCTCAGGAATGCAATTAAACATCTC
GGTTTTGACATCAAAGATGTCCAAACACCAGAGGACATTTTGAAAGCAAAACGACTCATT
TTTCCTGGGGTTGGTGCTTTTGCTCCTGCCATGGATGTGCTAAACAAGAAGGGAATGGCT
GAAGCACTTTGTGCTTACATTGAGCAAGATCGCCCATTCCTAGGCATTTGTCTTGGACTG
CAGCTACTTTTTGAGTCAAGTGAAGAAAATGGACCAGTAAAGGGTCTAGGTTTGATTCCT
GGAGTAGTTGGACGTTTTGACTCTTCTAAAGGGATCAGAGTACCTCACATTGGCTGGAAT
GCACTTGAAATAGCAAAAGATACTCAAATTTTGGATGACGTTGGAAATTCACATGTCTAT
TTCGTACATTCTTATCGGGCAATGCCGTCTGATGAAAATAGAGAGTGGATATCATCGACC
TGCAAGTACGGTGACGATTTCATAGCATCCATTCAGAGGGGAAATGTCCATGCAGTTCAG
TTTCATCCTGAGAAGAGTGGTGATGTTGGCCTTTCTATATTGAGGAGGTTCTTGAATCCA
AAATCCGGGAGAACACAGAAGCTAGTCCAAGGGAATGCCTCTAAACTTGCAAAACGGGTT
ATTGCATGTCTTGATGTGAGGACAAATGATAAGGGTGACTTGGTTGTGACCAAAGGAGAC
CAATACGATGTTAGAGAGAATACAAAAGAAAATGAGGTGAGAAACCTTGGCAAGCCCGTG
GATCTTGCTGGACAGTATTACAAGGATGGGGCAGATGAGGTCAGCTTTTTAAATATTACT
GCTTTCCGAGACTTCCCCTTGGGCGATCTGCCAATGTTGCAGGTATTGAGGTATGCATCA
GAGAATGTTTTTGTGCCATTAACCGTTGGAGGTGGTATTAGAGACTTCAAAGATGCGAAT
GGCAGATACTACTCTAGTTTGGAAGTTGCTTCAGAATATTTTCGTTCTGGGGCAGACAAA
ATTTCTATTGGAAGTGATGCTGTTTATGCTGCGGAAGAATACTTAAAATCTGGAGTGAAA
ACTGGAAAGAGCAGTCTAGAGCAGATCTCCCGAGTTTATGGAAATCAGGCAGTAGTTGTA
AGCATTGATCCTCGAAGGGTGTACGTAAAGGACCCCAAGGCTGTGGAATTCAGGACTGTG
AAAGTGAGAAACCCAGGTCCAAATGGAGAAGAGTATGCATGGTACCAGTGCACGGTGAGT
GGTGGGAGAGAAGGCCGCCTTATTGGAGCTTATGAGCTTGCGAAAGCTGTTGAGGAATTA
GGAGCTGGGGAGATACTGCTAAACTGCATTGATTGTGATGGTCAAGGAAAGGGATTTGAT
ATAGACCTAATTAAGTTGATTTCAGATGCTGTAAGCATTCCTGTGATTGCAAGCAGTGGA
GCTGGAGCTGTTGAACACTTTACAGAGGTCTTCAGAGAAACAAATGCTTCTGCTGCCCTT
GCTGCTGGAATTTTCCATAGGAAGGAGATTCCCATCCAAGCTGTGAAAGAGCACCTGTCA
GAGGAAGGCATAGAAGTTAGAATGTAA

Peptide Sequence

PEP ID

PGSC0003DMP400038453
PEP Infomation

pacid=37431278 transcript=PGSC0003DMT400057174 locus=PGSC0003DMG400022211 ID=PGSC0003DMT400057174.v4.03 annot-version=v4.03
Sequence

MEAASFTSASSTTTPFSSYSSTSQSLRFLRYKPNAKPLNYKSSRSFSVRASATSADDSVV
TVLDYGAGNVRSLRNAIKHLGFDIKDVQTPEDILKAKRLIFPGVGAFAPAMDVLNKKGMA
EALCAYIEQDRPFLGICLGLQLLFESSEENGPVKGLGLIPGVVGRFDSSKGIRVPHIGWN
ALEIAKDTQILDDVGNSHVYFVHSYRAMPSDENREWISSTCKYGDDFIASIQRGNVHAVQ
FHPEKSGDVGLSILRRFLNPKSGRTQKLVQGNASKLAKRVIACLDVRTNDKGDLVVTKGD
QYDVRENTKENEVRNLGKPVDLAGQYYKDGADEVSFLNITAFRDFPLGDLPMLQVLRYAS
ENVFVPLTVGGGIRDFKDANGRYYSSLEVASEYFRSGADKISIGSDAVYAAEEYLKSGVK
TGKSSLEQISRVYGNQAVVVSIDPRRVYVKDPKAVEFRTVKVRNPGPNGEEYAWYQCTVS
GGREGRLIGAYELAKAVEELGAGEILLNCIDCDGQGKGFDIDLIKLISDAVSIPVIASSG
AGAVEHFTEVFRETNASAALAAGIFHRKEIPIQAVKEHLSEEGIEVRM*

Transcript Sequence

Transcript ID

PGSC0003DMT400057174
Transcript Infomation

pacid=37431278 locus=PGSC0003DMG400022211 ID=PGSC0003DMT400057174.v4.03 annot-version=v4.03
Sequence

ATGGAGGCGGCCAGTTTCACTTCTGCTTCATCAACGACGACACCGTTTTCATCTTATTCC
TCCACTTCTCAATCTCTTCGTTTCCTACGTTACAAGCCTAATGCGAAACCTCTGAATTAC
AAATCTTCCAGAAGCTTCTCAGTCCGCGCTTCCGCCACCAGTGCCGATGATTCTGTGGTA
ACTGTACTTGATTATGGTGCTGGCAATGTGCGGAGTCTCAGGAATGCAATTAAACATCTC
GGTTTTGACATCAAAGATGTCCAAACACCAGAGGACATTTTGAAAGCAAAACGACTCATT
TTTCCTGGGGTTGGTGCTTTTGCTCCTGCCATGGATGTGCTAAACAAGAAGGGAATGGCT
GAAGCACTTTGTGCTTACATTGAGCAAGATCGCCCATTCCTAGGCATTTGTCTTGGACTG
CAGCTACTTTTTGAGTCAAGTGAAGAAAATGGACCAGTAAAGGGTCTAGGTTTGATTCCT
GGAGTAGTTGGACGTTTTGACTCTTCTAAAGGGATCAGAGTACCTCACATTGGCTGGAAT
GCACTTGAAATAGCAAAAGATACTCAAATTTTGGATGACGTTGGAAATTCACATGTCTAT
TTCGTACATTCTTATCGGGCAATGCCGTCTGATGAAAATAGAGAGTGGATATCATCGACC
TGCAAGTACGGTGACGATTTCATAGCATCCATTCAGAGGGGAAATGTCCATGCAGTTCAG
TTTCATCCTGAGAAGAGTGGTGATGTTGGCCTTTCTATATTGAGGAGGTTCTTGAATCCA
AAATCCGGGAGAACACAGAAGCTAGTCCAAGGGAATGCCTCTAAACTTGCAAAACGGGTT
ATTGCATGTCTTGATGTGAGGACAAATGATAAGGGTGACTTGGTTGTGACCAAAGGAGAC
CAATACGATGTTAGAGAGAATACAAAAGAAAATGAGGTGAGAAACCTTGGCAAGCCCGTG
GATCTTGCTGGACAGTATTACAAGGATGGGGCAGATGAGGTCAGCTTTTTAAATATTACT
GCTTTCCGAGACTTCCCCTTGGGCGATCTGCCAATGTTGCAGGTATTGAGGTATGCATCA
GAGAATGTTTTTGTGCCATTAACCGTTGGAGGTGGTATTAGAGACTTCAAAGATGCGAAT
GGCAGATACTACTCTAGTTTGGAAGTTGCTTCAGAATATTTTCGTTCTGGGGCAGACAAA
ATTTCTATTGGAAGTGATGCTGTTTATGCTGCGGAAGAATACTTAAAATCTGGAGTGAAA
ACTGGAAAGAGCAGTCTAGAGCAGATCTCCCGAGTTTATGGAAATCAGGCAGTAGTTGTA
AGCATTGATCCTCGAAGGGTGTACGTAAAGGACCCCAAGGCTGTGGAATTCAGGACTGTG
AAAGTGAGAAACCCAGGTCCAAATGGAGAAGAGTATGCATGGTACCAGTGCACGGTGAGT
GGTGGGAGAGAAGGCCGCCTTATTGGAGCTTATGAGCTTGCGAAAGCTGTTGAGGAATTA
GGAGCTGGGGAGATACTGCTAAACTGCATTGATTGTGATGGTCAAGGAAAGGGATTTGAT
ATAGACCTAATTAAGTTGATTTCAGATGCTGTAAGCATTCCTGTGATTGCAAGCAGTGGA
GCTGGAGCTGTTGAACACTTTACAGAGGTCTTCAGAGAAACAAATGCTTCTGCTGCCCTT
GCTGCTGGAATTTTCCATAGGAAGGAGATTCCCATCCAAGCTGTGAAAGAGCACCTGTCA
GAGGAAGGCATAGAAGTTAGAATGTAA