Plant GARDEN
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TOP > About the Species(Solanum tuberosum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400057156
CDS Infomation

pacid=37432248 polypeptide=PGSC0003DMP400038439 locus=PGSC0003DMG400022203 ID=PGSC0003DMT400057156.v4.03 annot-version=v4.03
Sequence

ATGGCACCTTTAGGAGACAATAATAACAATAATGTTGTTGTTTCAAACTTGAAACTTGAA
AGAATGCTTAGTATGAAGGGAGGCAAAGGAGAAGCTAGCTATGTCAATAACTCTCAAGCT
CAGGGGCAACATGCACGATCAATGCTACACTTATTGAAAGATACTCTCGACGGAGTTCAG
CTAAACTCGCCGGAGATTCCATTCGTAATCGCCGATTTAGGCTGTTCATGCGGTAGCAAC
ACGATTTTCATTATCGACGTAATCGTCGAACACATGAGCAAGCGTTACGAAGCCATCGGA
CAAGAGCCGCCGGAATTTTCAGCTTTCTTCTCCGATCTACCGTCGAACGATTTCAACACT
CTGTTTCAATTGCTACCGCCTTTAGCTAATAATGGCTGTGGAAGTATGGAGGAATGCTTA
GCTTCTAATAGCCACCGCTCTTATTTCGCCGCCGGCGTTCCTGGTTCCTTTTACCGGCGT
CTTTTTCCGGCCAGATCTATCGACGTTTTCTATTCCGCATTTTCTCTGCATTGGCTCTCT
CAGGTGCCGGAGATAGTGTTGGATAAGAGATCAGCAGCATATAACAAAGGGAAAATTTAC
ATACATGGAGCAAATGAGAGCACAGCAAATGCATACAGAAAGCAATTTCAGACAGATTTG
GCTTATTTTTTGGGATGTAGGTCCAAAGAAATGAAGAGAGGTGGTTCTATGTTTTTAGCT
TGTTTGGGTAGAACTTCTGTTGATCCTACTGATCAAGGTGGGGCTGGACTTCTCTTTGGC
ACACACTTTCAAGATGCTTGGGATGATCTTGTCCAAGAGGGCCTAATTACTAGTGAGAAA
AGGGACAAGTTCAATATTCCAGTGTATGCACCAAGCATTCAAGATTTCAAAGAAGTGGTA
GAAGCAAATGGCTCATTCAAAATCAACAATCTTCAAGTTTTTAGGGGAGGAAGCCCTCTT
GTGGTTAGCCATCCAGACGACGCGGCTGAAATAGGACGAGCACTAGCTAACAGCTGTAGG
AGTGTTAGTGGGGTGCTCGTCGATGCCCACATTGGTGAACAGCTTAGTGATGAGCTGTTC
ACCAGAGTGGAGGAACGAGCCACGTGTCATGCAAAAGAGCTTCTTCAGAATCTTCAGTTT
TTTCATATTGTTGCTTCCCTTTCTCTTGTGTAG

Peptide Sequence

PEP ID

PGSC0003DMP400038439
PEP Infomation

pacid=37432248 transcript=PGSC0003DMT400057156 locus=PGSC0003DMG400022203 ID=PGSC0003DMT400057156.v4.03 annot-version=v4.03
Sequence

MAPLGDNNNNNVVVSNLKLERMLSMKGGKGEASYVNNSQAQGQHARSMLHLLKDTLDGVQ
LNSPEIPFVIADLGCSCGSNTIFIIDVIVEHMSKRYEAIGQEPPEFSAFFSDLPSNDFNT
LFQLLPPLANNGCGSMEECLASNSHRSYFAAGVPGSFYRRLFPARSIDVFYSAFSLHWLS
QVPEIVLDKRSAAYNKGKIYIHGANESTANAYRKQFQTDLAYFLGCRSKEMKRGGSMFLA
CLGRTSVDPTDQGGAGLLFGTHFQDAWDDLVQEGLITSEKRDKFNIPVYAPSIQDFKEVV
EANGSFKINNLQVFRGGSPLVVSHPDDAAEIGRALANSCRSVSGVLVDAHIGEQLSDELF
TRVEERATCHAKELLQNLQFFHIVASLSLV*

Transcript Sequence

Transcript ID

PGSC0003DMT400057156
Transcript Infomation

pacid=37432248 locus=PGSC0003DMG400022203 ID=PGSC0003DMT400057156.v4.03 annot-version=v4.03
Sequence

ATGGCACCTTTAGGAGACAATAATAACAATAATGTTGTTGTTTCAAACTTGAAACTTGAA
AGAATGCTTAGTATGAAGGGAGGCAAAGGAGAAGCTAGCTATGTCAATAACTCTCAAGCT
CAGGGGCAACATGCACGATCAATGCTACACTTATTGAAAGATACTCTCGACGGAGTTCAG
CTAAACTCGCCGGAGATTCCATTCGTAATCGCCGATTTAGGCTGTTCATGCGGTAGCAAC
ACGATTTTCATTATCGACGTAATCGTCGAACACATGAGCAAGCGTTACGAAGCCATCGGA
CAAGAGCCGCCGGAATTTTCAGCTTTCTTCTCCGATCTACCGTCGAACGATTTCAACACT
CTGTTTCAATTGCTACCGCCTTTAGCTAATAATGGCTGTGGAAGTATGGAGGAATGCTTA
GCTTCTAATAGCCACCGCTCTTATTTCGCCGCCGGCGTTCCTGGTTCCTTTTACCGGCGT
CTTTTTCCGGCCAGATCTATCGACGTTTTCTATTCCGCATTTTCTCTGCATTGGCTCTCT
CAGGTGCCGGAGATAGTGTTGGATAAGAGATCAGCAGCATATAACAAAGGGAAAATTTAC
ATACATGGAGCAAATGAGAGCACAGCAAATGCATACAGAAAGCAATTTCAGACAGATTTG
GCTTATTTTTTGGGATGTAGGTCCAAAGAAATGAAGAGAGGTGGTTCTATGTTTTTAGCT
TGTTTGGGTAGAACTTCTGTTGATCCTACTGATCAAGGTGGGGCTGGACTTCTCTTTGGC
ACACACTTTCAAGATGCTTGGGATGATCTTGTCCAAGAGGGCCTAATTACTAGTGAGAAA
AGGGACAAGTTCAATATTCCAGTGTATGCACCAAGCATTCAAGATTTCAAAGAAGTGGTA
GAAGCAAATGGCTCATTCAAAATCAACAATCTTCAAGTTTTTAGGGGAGGAAGCCCTCTT
GTGGTTAGCCATCCAGACGACGCGGCTGAAATAGGACGAGCACTAGCTAACAGCTGTAGG
AGTGTTAGTGGGGTGCTCGTCGATGCCCACATTGGTGAACAGCTTAGTGATGAGCTGTTC
ACCAGAGTGGAGGAACGAGCCACGTGTCATGCAAAAGAGCTTCTTCAGAATCTTCAGTTT
TTTCATATTGTTGCTTCCCTTTCTCTTGTGTAG