Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400057140
CDS Infomation

pacid=37432860 polypeptide=PGSC0003DMP400038426 locus=PGSC0003DMG402022197 ID=PGSC0003DMT400057140.v4.03 annot-version=v4.03
Sequence

ATGTCTTTTGTTGGTGTTATTGTTTCTGATCAATGGCTGCACAGTCAATTCACTCAGGTG
GAGCTTCGAACCCTCAAATCGAAATTCATTTCAGTTAAGAGTCAAAATGGTAAAGTTACA
ATTGGAGACTTACCGCCTTTGATGGCGAAATTAAAGGCTTTCAATGAGATGTTTAATGAG
GAAGAGATCCGGAATATCTTGGCTGAATCGGGTTCAGATGTGAATGATGAGATTGATTTC
GAAAGCTTCCTTAAAACATACTTGAATATACAAGCTCGAGCTGCCCCAAAAGTAGGCAGT
TCTAAAAGTTCGTCTTCCTTCCTGAAGGCTTCCACAACTACACTTCTTCACACGATCAGT
GAATCAGAGAAATCATCTTATGTTGCTCATATAAACAGCTATCTAAGAGATGATCCATTC
TTAAAGCAATTTCTTCCAATAGATCCAGCTTCAAATGCTTTGTTTGATTTGGCAAAGGAT
GGAGTTCTTTTATGTAAGCTGATCAATGTAGCTGTACCTGGCACCATAGATGAACGGACT
ATTAACATGAAACGAGTAATTAACCCATGGGAAAGAAATGAGAATCACACCCTTTGCCTC
AATTCTGCAAAGGCTATTGGATGTACTGTAGTCAATATTGGCACTCAGGACCTGGTTGAA
GGACGACCTCACCTAGTACTTGGGCTGATTTCTCAAATCATAAAGATCCAACTATTGGCA
GATCTCAACCTCCGGAAGACCCCTCAGCTTGTGGAACTTGTGGAAGACAGCAATGATGTC
GAGGAGCTCATGGGGTTAGCCCCAGAAAAACTCTTACTAAAATGGATGAATTTTCATCTC
AAGAAAGCCGGTTACAAGAAAACTGTGGCAAATTTTTCTTCTGACTTGAAGGATGGGGAG
GCCTATGCTTACCTGCTTAATGTACTTGCACCAGAGCATTGCAGCCCAGCAACCTTGGAT
GTCAAGGATCCCACCGAGAGAGCTAACTTAGTTCTTGAGCATGCAGAGAAAATGGATTGC
AAAAGATACCTAGATCCTAAGGACATAGTTGAAGGCTCATCCAATTTAAATCTTGCTTTT
GTTGCACAAATATTCCATCAGAGGAGTGGGTTGTCTACAGACAGCAAGAAGGTATCCTTT
GCAGAGATGATGACAGATGATGAGCTAATTTCCAGAGAGGAGAGATGCTTTCGATTATGG
ATTAATAGTCTTGGGATAAACTCTTATGTCAATAATTTGTTTGAAGATGTAAGAAATGGA
TGGGTACTTCTGGAGGTGTTGGACAAGGTTTCTCCAGGATCTGTTAATTGGAAGCACTCA
ACCAAACCTCCAATAAAAATGCCGTTTAGGAAAGTTGAAAACTGCAACCAAGTTGTCAAG
ATTGGGAAGCAGTTGAAGCTTTCCCTTGTAAATGTGGGAGGAAACGATTTTGTCCAAGGG
AATAAGAAGCTTATACTTGCTTTCCTGTGGCAGTTGATGAGGTTTAATATGCTTCAGCTT
TTGAAGAACTTGAGATCGCGTTTCCGAGGGAAGGAGATTACTGATGCTGATATTCTCGCT
TGGGCAAACAAAAAAGTCAAAAACACTGGAAGAACATCTAAAATGGAGAGTTTTAAGGAT
AAGAGCCTTTCAAATGGATTATTCTTTCTCGAGCTTCTCAGTGCTGTGGAGCCAAGGGTT
GTTAATTGGAATCTTGTCACCAAGGGTGAAAGTGATGAGGAAAAGAAGTTGAATGCTACT
TATATCATCAGTGTTGCACGGAAACTTGGGTGTTCTATCTTTCTGTTGCCTGAGGATATC
ATGGAGGTTAACCAAAAGATGATCCTCACTCTCACTGCCAGCATCATGTACTGGAGCCTT
CAGCAGACAGCGGACGATATAGAGTCTCCTGCAAGTACTGTTGCATCTGATGCATCACCA
GCAAGATCTATGAATGGCTCTATGTCCCCCTATACTGCTGCTTCACCTGATGCATCCCCT
GCACCTTCAATTAGTGGAGCATCATCAACTACTCCTGATGCATCTCCAGCACCATCTGTA
AACGGAGATGATGAAACCCCACTTATTACTGAAGTGTCAAAGTTGGAGTTGGCTGCTGAC
TATGCACCATCTGATACTCCTGAGGTGTCAAAGTTGAAGTTGGCTGCTGACGATGCACCA
TTTGACTGCTTACTGAAGTGTCAAAGTTGGAGTTGGCTGCTGACTATGCACCATCTGATA
CTCCTGAGGTGTCAAAGTTGA

Peptide Sequence

PEP ID

PGSC0003DMP400038426
PEP Infomation

pacid=37432860 transcript=PGSC0003DMT400057140 locus=PGSC0003DMG402022197 ID=PGSC0003DMT400057140.v4.03 annot-version=v4.03
Sequence

MSFVGVIVSDQWLHSQFTQVELRTLKSKFISVKSQNGKVTIGDLPPLMAKLKAFNEMFNE
EEIRNILAESGSDVNDEIDFESFLKTYLNIQARAAPKVGSSKSSSSFLKASTTTLLHTIS
ESEKSSYVAHINSYLRDDPFLKQFLPIDPASNALFDLAKDGVLLCKLINVAVPGTIDERT
INMKRVINPWERNENHTLCLNSAKAIGCTVVNIGTQDLVEGRPHLVLGLISQIIKIQLLA
DLNLRKTPQLVELVEDSNDVEELMGLAPEKLLLKWMNFHLKKAGYKKTVANFSSDLKDGE
AYAYLLNVLAPEHCSPATLDVKDPTERANLVLEHAEKMDCKRYLDPKDIVEGSSNLNLAF
VAQIFHQRSGLSTDSKKVSFAEMMTDDELISREERCFRLWINSLGINSYVNNLFEDVRNG
WVLLEVLDKVSPGSVNWKHSTKPPIKMPFRKVENCNQVVKIGKQLKLSLVNVGGNDFVQG
NKKLILAFLWQLMRFNMLQLLKNLRSRFRGKEITDADILAWANKKVKNTGRTSKMESFKD
KSLSNGLFFLELLSAVEPRVVNWNLVTKGESDEEKKLNATYIISVARKLGCSIFLLPEDI
MEVNQKMILTLTASIMYWSLQQTADDIESPASTVASDASPARSMNGSMSPYTAASPDASP
APSISGASSTTPDASPAPSVNGDDETPLITEVSKLELAADYAPSDTPEVSKLKLAADDAP
FDCLLKCQSWSWLLTMHHLILLRCQS*

Transcript Sequence

Transcript ID

PGSC0003DMT400057140
Transcript Infomation

pacid=37432860 locus=PGSC0003DMG402022197 ID=PGSC0003DMT400057140.v4.03 annot-version=v4.03
Sequence

ATGTCTTTTGTTGGTGTTATTGTTTCTGATCAATGGCTGCACAGTCAATTCACTCAGGTG
GAGCTTCGAACCCTCAAATCGAAATTCATTTCAGTTAAGAGTCAAAATGGTAAAGTTACA
ATTGGAGACTTACCGCCTTTGATGGCGAAATTAAAGGCTTTCAATGAGATGTTTAATGAG
GAAGAGATCCGGAATATCTTGGCTGAATCGGGTTCAGATGTGAATGATGAGATTGATTTC
GAAAGCTTCCTTAAAACATACTTGAATATACAAGCTCGAGCTGCCCCAAAAGTAGGCAGT
TCTAAAAGTTCGTCTTCCTTCCTGAAGGCTTCCACAACTACACTTCTTCACACGATCAGT
GAATCAGAGAAATCATCTTATGTTGCTCATATAAACAGCTATCTAAGAGATGATCCATTC
TTAAAGCAATTTCTTCCAATAGATCCAGCTTCAAATGCTTTGTTTGATTTGGCAAAGGAT
GGAGTTCTTTTATGTAAGCTGATCAATGTAGCTGTACCTGGCACCATAGATGAACGGACT
ATTAACATGAAACGAGTAATTAACCCATGGGAAAGAAATGAGAATCACACCCTTTGCCTC
AATTCTGCAAAGGCTATTGGATGTACTGTAGTCAATATTGGCACTCAGGACCTGGTTGAA
GGACGACCTCACCTAGTACTTGGGCTGATTTCTCAAATCATAAAGATCCAACTATTGGCA
GATCTCAACCTCCGGAAGACCCCTCAGCTTGTGGAACTTGTGGAAGACAGCAATGATGTC
GAGGAGCTCATGGGGTTAGCCCCAGAAAAACTCTTACTAAAATGGATGAATTTTCATCTC
AAGAAAGCCGGTTACAAGAAAACTGTGGCAAATTTTTCTTCTGACTTGAAGGATGGGGAG
GCCTATGCTTACCTGCTTAATGTACTTGCACCAGAGCATTGCAGCCCAGCAACCTTGGAT
GTCAAGGATCCCACCGAGAGAGCTAACTTAGTTCTTGAGCATGCAGAGAAAATGGATTGC
AAAAGATACCTAGATCCTAAGGACATAGTTGAAGGCTCATCCAATTTAAATCTTGCTTTT
GTTGCACAAATATTCCATCAGAGGAGTGGGTTGTCTACAGACAGCAAGAAGGTATCCTTT
GCAGAGATGATGACAGATGATGAGCTAATTTCCAGAGAGGAGAGATGCTTTCGATTATGG
ATTAATAGTCTTGGGATAAACTCTTATGTCAATAATTTGTTTGAAGATGTAAGAAATGGA
TGGGTACTTCTGGAGGTGTTGGACAAGGTTTCTCCAGGATCTGTTAATTGGAAGCACTCA
ACCAAACCTCCAATAAAAATGCCGTTTAGGAAAGTTGAAAACTGCAACCAAGTTGTCAAG
ATTGGGAAGCAGTTGAAGCTTTCCCTTGTAAATGTGGGAGGAAACGATTTTGTCCAAGGG
AATAAGAAGCTTATACTTGCTTTCCTGTGGCAGTTGATGAGGTTTAATATGCTTCAGCTT
TTGAAGAACTTGAGATCGCGTTTCCGAGGGAAGGAGATTACTGATGCTGATATTCTCGCT
TGGGCAAACAAAAAAGTCAAAAACACTGGAAGAACATCTAAAATGGAGAGTTTTAAGGAT
AAGAGCCTTTCAAATGGATTATTCTTTCTCGAGCTTCTCAGTGCTGTGGAGCCAAGGGTT
GTTAATTGGAATCTTGTCACCAAGGGTGAAAGTGATGAGGAAAAGAAGTTGAATGCTACT
TATATCATCAGTGTTGCACGGAAACTTGGGTGTTCTATCTTTCTGTTGCCTGAGGATATC
ATGGAGGTTAACCAAAAGATGATCCTCACTCTCACTGCCAGCATCATGTACTGGAGCCTT
CAGCAGACAGCGGACGATATAGAGTCTCCTGCAAGTACTGTTGCATCTGATGCATCACCA
GCAAGATCTATGAATGGCTCTATGTCCCCCTATACTGCTGCTTCACCTGATGCATCCCCT
GCACCTTCAATTAGTGGAGCATCATCAACTACTCCTGATGCATCTCCAGCACCATCTGTA
AACGGAGATGATGAAACCCCACTTATTACTGAAGTGTCAAAGTTGGAGTTGGCTGCTGAC
TATGCACCATCTGATACTCCTGAGGTGTCAAAGTTGAAGTTGGCTGCTGACGATGCACCA
TTTGACTGCTTACTGAAGTGTCAAAGTTGGAGTTGGCTGCTGACTATGCACCATCTGATA
CTCCTGAGGTGTCAAAGTTGA