Plant GARDEN
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TOP > About the Species(Solanum tuberosum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400057126
CDS Infomation

pacid=37431962 polypeptide=PGSC0003DMP400038412 locus=PGSC0003DMG400022193 ID=PGSC0003DMT400057126.v4.03 annot-version=v4.03
Sequence

ATGTCAATTGTAAGAGAACCTCGTTCTATTGCTAGAAATTTTTTGGCAAGGCCTCAACAA
GAAGGCCTTGGAGCTGTTGTTAGAAGAAGCATTGGAAGGTTTGAGTTAAGATACTTTGAT
CCATTCATTGTTTTGGATGAATTCTCAGTTTCTGCTCCAGCTGGTTTTCCTGATCATCCA
CATAGAGGCTTTGAAACTGTCACGTACATGTTGCAGGGAGCTGTGACACATGAAGATTTT
GATGGACACAAAGGCACAATTAAAGCAGGTGATTTACAATGGATGACTGCTGGAAGAGGA
GTAGTTCATTCAGAAATGCCTGCAACTGAGGGAATTCAAAAAGGTTTACAATTATGGATT
AACCTCTCCTCCAAAAACAAAATGATTCAACCAAGATATCAAGAAATATCAAGTGCAAAC
ATAGGAGAAGCAACAAAAGATGGAGTAAAAGTGAGAGTTATAGCAGGAGAAGCACTAGGA
ATAAAATCAACTATACACACAAAAACTCCAACAATATATTTGGACTTTACTCTAAAACCA
GGATCCCAAATTCAACAACCAATTCCCAAATCATATAATTCATTTGTATATATTTTAGAA
GGTGAAGGTATATTTGGTCAAGATTCAAGAACAAATTCACCTATATCTTCACATAATTTG
TTGCTTTTAAGTGGATTTGGTGATGGACTTGTGGCATGGAATAAAGGGACAAAAATACTA
AGGTTTATATTAGTAGGTGGAGAGCCATTGGGTGAACCAATTGCACAATTGGGACCTTTT
GTGATGAATACTCAAGAAGAAATTGATCAAACTATTGAGGATTTTGAGAATTATACTAAT
GGTTTTGAGAAAGCTAGGTATTGGAGATCTCAAGCTAGAGTTGAGCTTGGTTATTAA

Peptide Sequence

PEP ID

PGSC0003DMP400038412
PEP Infomation

pacid=37431962 transcript=PGSC0003DMT400057126 locus=PGSC0003DMG400022193 ID=PGSC0003DMT400057126.v4.03 annot-version=v4.03
Sequence

MSIVREPRSIARNFLARPQQEGLGAVVRRSIGRFELRYFDPFIVLDEFSVSAPAGFPDHP
HRGFETVTYMLQGAVTHEDFDGHKGTIKAGDLQWMTAGRGVVHSEMPATEGIQKGLQLWI
NLSSKNKMIQPRYQEISSANIGEATKDGVKVRVIAGEALGIKSTIHTKTPTIYLDFTLKP
GSQIQQPIPKSYNSFVYILEGEGIFGQDSRTNSPISSHNLLLLSGFGDGLVAWNKGTKIL
RFILVGGEPLGEPIAQLGPFVMNTQEEIDQTIEDFENYTNGFEKARYWRSQARVELGY*

Transcript Sequence

Transcript ID

PGSC0003DMT400057126
Transcript Infomation

pacid=37431962 locus=PGSC0003DMG400022193 ID=PGSC0003DMT400057126.v4.03 annot-version=v4.03
Sequence

ATGTCAATTGTAAGAGAACCTCGTTCTATTGCTAGAAATTTTTTGGCAAGGCCTCAACAA
GAAGGCCTTGGAGCTGTTGTTAGAAGAAGCATTGGAAGGTTTGAGTTAAGATACTTTGAT
CCATTCATTGTTTTGGATGAATTCTCAGTTTCTGCTCCAGCTGGTTTTCCTGATCATCCA
CATAGAGGCTTTGAAACTGTCACGTACATGTTGCAGGGAGCTGTGACACATGAAGATTTT
GATGGACACAAAGGCACAATTAAAGCAGGTGATTTACAATGGATGACTGCTGGAAGAGGA
GTAGTTCATTCAGAAATGCCTGCAACTGAGGGAATTCAAAAAGGTTTACAATTATGGATT
AACCTCTCCTCCAAAAACAAAATGATTCAACCAAGATATCAAGAAATATCAAGTGCAAAC
ATAGGAGAAGCAACAAAAGATGGAGTAAAAGTGAGAGTTATAGCAGGAGAAGCACTAGGA
ATAAAATCAACTATACACACAAAAACTCCAACAATATATTTGGACTTTACTCTAAAACCA
GGATCCCAAATTCAACAACCAATTCCCAAATCATATAATTCATTTGTATATATTTTAGAA
GGTGAAGGTATATTTGGTCAAGATTCAAGAACAAATTCACCTATATCTTCACATAATTTG
TTGCTTTTAAGTGGATTTGGTGATGGACTTGTGGCATGGAATAAAGGGACAAAAATACTA
AGGTTTATATTAGTAGGTGGAGAGCCATTGGGTGAACCAATTGCACAATTGGGACCTTTT
GTGATGAATACTCAAGAAGAAATTGATCAAACTATTGAGGATTTTGAGAATTATACTAAT
GGTTTTGAGAAAGCTAGGTATTGGAGATCTCAAGCTAGAGTTGAGCTTGGTTATTAA