Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400057119
CDS Infomation

pacid=37433389 polypeptide=PGSC0003DMP400038407 locus=PGSC0003DMG400022190 ID=PGSC0003DMT400057119.v4.03 annot-version=v4.03
Sequence

ATGTCAGAAAACAGATTCTTAGGCAACATTTCTGCCTCTTCGTTCCGAAATCTACTTCCA
AAATCAGTTTCAACTAAGAAAAAGTTGAGTTCAAGCCGATTTAAACACAAAATGAACAGT
GAAAATGTTGCTCCTATAGATCCCAACATTCAGATCAGTGATCCACCGTTGTTACCTACA
AGTTCGATACTTAAAAAACCCGTCTTGAAGACGATTGATAGTGATGTATCGGCAGAACTC
ACCAGATCTGTTGCACAGGAACAAACATCAGAAGCTCCTGATCCACCAGTTAAGGTTGTT
GCAAGGATTAGGCCTGCTAATGGTATTGAGAGTGGAAGCCAAGCTGTTCGCAAAGTTTCT
GATACCTCAGTGTGCGTTGCTGATAGAAAGTTTAACTTTGACATGGTTTTTGGTTCAAAT
TCGAATCAGGAAGACATATTTCAATCGGTTGGTGCCCCTTTAGTTAAGGATGCATTGGCA
GGTTACAACACTTCTCTCTTAGCTTATGGACAGACCGGAAGTGGCAAGACTTATACAATG
TGGGGACCTCCTAGTTCCATTGTTGAAGTTCCATCACCTAATGGTCTTCAAGGCATTGTG
CCGCGCATTTTCCAGACGTTGTTTTCTAGCATACAAAAGGAGCAAGAGAACTCTGAAGGT
AAACAGATAAATTACCAGTGTCGTTGCTCATTCCTAGAGATATATGATGAACACATTGGG
GATCTACTTGATCCTACACAGAGAAACTTAAAGATAATGGATGATCCAAGAGTTGGATTC
TATGTTGAGAACATAACTGAGGAATATGTGTCTACCTATGAGGACGTATCCCAAATGTTG
ATTAAGGGCCTTTCAAGTAGAAAAGTTGGATCAACGAGCATCAATTCGAAGAGTTCTAGG
TCCCATATTGTTTTTACCTGCGTCATTGAGTCCTGGTGCAAGGAGTCCTCATCAACGTGT
TTTGGTAGCTCAAAGATGAGCAGAATGAGCCTTGTTGATCTTGCTGGATTTGACAAAAAT
ATACCTGATGATGCCGGTAAACAGTTTGTTAAGGAAGGGAAGTACGTAAAGAAGTCCACA
TCACTGCTCGGGCATTTGGTTAATGTCCTCTCTGAAAGGAGTCAGTCCAGGAAACTTGAG
GATGTTTCGTACAGCAGTTCCACTTTGACTCATTTAATGAGAGAATCACTTGGAGGGAAT
GCTAAACTCTCCGTCATATGTGCTATCAGCCCAGAAAACAAGCATAATAGTGAAACAGTA
AGCACTCTGAGATTTGGGAAACGGGTGAAACTCATACCAAATGAGCCATTGGTAAATGAA
ATAACAGAAGACGATGTTAATGGCCTGAGTGATCAGATTCGCCAATTGAAGGAAGAGCTT
ATAAGAGCTCGGTCAAGTGCAAGCATTTCAGTCGGAAGCAACTATGGATCCTTCAGAGGA
CCAAATGTACGTGAAAGCTTGAATCAGTTGAGAGTGAGCCTTAACCGTTCACTGATCTTA
CCTAACATAGATAATGAGCGTGAAGAAGAAGAGGTTCACATAAATGAGGATGATATAAAA
GAACTACAGCTCCAGATCGATAACTTACGTGGTTCACGTGGAAATAACTCAAACTCTCTC
AAGTATTCATCTGGAGAAAGTGAACACTATATCAGCTGTTCAGAAGAAAGTGAAGGTGAA
GAAATTAACTCAGAAGAGATACTGGAGGAGACCCTTGATGCTGACCACGAGATGGAAACA
CTGCAGCCTGAATACTGTAGCAGCATCTCAATCGGCCCATCTCGCCATTCTGCTGATCTT
CCGGGCCCGGTGTTATCTGAGTCCCCAAAGTTTCGGAACATGCAGAGGAAGAGCTTAATT
ATCTCCAGTGAAGATAATATTCAATGTTCCTCCAAAAGTTCTGAATTGCCGTCCCTACCA
CAGAAACAAGACCTTGTCCAGTCTTCTTTGAGGTCCAGCAGAATATTTCCTGGGCCAACT
GAATCCTTGGCTGCCAGTCTACATAGAGGACTAGAGATCATTGATTATCACCAAAGGAAT
TCCGCATCAAATAAATCTTTAGTTTCCTTCTCTTTTGAACATTTGGCAGTGAACCCAAGC
TCAATGTCAAATGATAAGGCAAATGCTTCTATTCAAACATCATCCGAAGAAGGACAAACT
TCTCCTTTTGTAGCCACTTCATTTCTGTGCCCAAAGTGCAAGACGAAAGCAACTTCCTCT
AGTGTTGTTAAGGATAGCACTGGGACATGGATGGTCCCCATGGAAGGGGCAAGTACGGAA
CAAGATTCGGAGAAAGTTTTGTTCCAAGCTCTAGAGAGAGAGAAGCAGCTTGAAAGTGTA
TGCAAGGATCAAGCAGACAAACTTGAGCAGCTAAACCAACTACTAGCACACTGTAAATGC
ACAAAAGAACAGAGTTCTCTAGTTGACTGTGGCAACGATGTTGTTGATCTCCACGACAAT
GAGAATCAAGCTTCACTAATCTATCAGAATGGGAGTCAATCACCCAACATCCCAAAGCTC
CTGAAGTGGGATGATGAAAGTCCTGAGCCTGAAGCTGCAGGAGAGAAGTATGAAACTAAA
GAAATTCAGGGCAATGTGGAAAACTGTGGTGGGAAAAAAATGTTTGATATGGCTGAGAGA
GAAGCACTACTTGAAGAAATTGGAGGCCTAAGGTCCCAATTGAAGTCAGATGGAGCATCT
ACAAATAAATCAATTGAAAGAACCAGATCCTCTTTGTTAGCACAATCAATGCAGCTGAGA
AAGAGTGGTGTATATGCAGCTACAAGTTCTGGTGAAGAACTTGAGAAGGAAAGAGAAAGA
TGGACTGAAATGGAGAGCGAGTGGATTTGTCTAACTGATGAGCTTAGAATTGATCTTGAG
GCTTATCGCCAGCGTGCAGAAAAGGTGGCAATGGAATTAATGTTGGAGAAGAAATGCACA
GATGAGTTGGATGATGCCCTCAAAAGATCGGTCTTTGGGCAAGCCAGAATAATTGAGCAT
TATGCAGAATTACAGGAGAAGTACAATGACTTAGCTGAGAAGCATAAGTTGATCTTGCAA
GGGATACAAGATGTGAAAAATGCTGCAGCAAAAGCAGGAAAGAAAGGTCATGGTGCTCGT
TTTGCCAAATCTCTTGCTGCGGAGCTCTCAGCTTTGAGAGTGGAAAGGGAAAGAGAGAGG
GAAATGCTGAAAAAGGAGAATAAAAGCTTGAGAGTTCAACTTAAAGACACTGCTGAAGCT
GTTCATGCTGCAGGAGAACTTCTTGTTAGATTGAGAGAAGCTGAGGAAACAGCTTCACTT
GCTGAGGAGAACTTTACACAATCAAAGGAAGAGAATGAGAGATTGAAGAAGCAAATAGAG
AAGCTGAAGAGAAAACATAAGATGGAGATGATAACAATGAAACAGTATCTTGCTGAGAGC
CGATTGCCAGAAGCAGCGTTGAGACCGCCAATTTACAGGCAAGACTCTGATGTAGCAAAC
AATGACAACAACAACACCATCCAACATTCTGAGTACGATGATGATCAATCATGGAGAGCA
GAATTTGGTGCCATTTATCAAGAACACATATGA

Peptide Sequence

PEP ID

PGSC0003DMP400038407
PEP Infomation

pacid=37433389 transcript=PGSC0003DMT400057119 locus=PGSC0003DMG400022190 ID=PGSC0003DMT400057119.v4.03 annot-version=v4.03
Sequence

MSENRFLGNISASSFRNLLPKSVSTKKKLSSSRFKHKMNSENVAPIDPNIQISDPPLLPT
SSILKKPVLKTIDSDVSAELTRSVAQEQTSEAPDPPVKVVARIRPANGIESGSQAVRKVS
DTSVCVADRKFNFDMVFGSNSNQEDIFQSVGAPLVKDALAGYNTSLLAYGQTGSGKTYTM
WGPPSSIVEVPSPNGLQGIVPRIFQTLFSSIQKEQENSEGKQINYQCRCSFLEIYDEHIG
DLLDPTQRNLKIMDDPRVGFYVENITEEYVSTYEDVSQMLIKGLSSRKVGSTSINSKSSR
SHIVFTCVIESWCKESSSTCFGSSKMSRMSLVDLAGFDKNIPDDAGKQFVKEGKYVKKST
SLLGHLVNVLSERSQSRKLEDVSYSSSTLTHLMRESLGGNAKLSVICAISPENKHNSETV
STLRFGKRVKLIPNEPLVNEITEDDVNGLSDQIRQLKEELIRARSSASISVGSNYGSFRG
PNVRESLNQLRVSLNRSLILPNIDNEREEEEVHINEDDIKELQLQIDNLRGSRGNNSNSL
KYSSGESEHYISCSEESEGEEINSEEILEETLDADHEMETLQPEYCSSISIGPSRHSADL
PGPVLSESPKFRNMQRKSLIISSEDNIQCSSKSSELPSLPQKQDLVQSSLRSSRIFPGPT
ESLAASLHRGLEIIDYHQRNSASNKSLVSFSFEHLAVNPSSMSNDKANASIQTSSEEGQT
SPFVATSFLCPKCKTKATSSSVVKDSTGTWMVPMEGASTEQDSEKVLFQALEREKQLESV
CKDQADKLEQLNQLLAHCKCTKEQSSLVDCGNDVVDLHDNENQASLIYQNGSQSPNIPKL
LKWDDESPEPEAAGEKYETKEIQGNVENCGGKKMFDMAEREALLEEIGGLRSQLKSDGAS
TNKSIERTRSSLLAQSMQLRKSGVYAATSSGEELEKERERWTEMESEWICLTDELRIDLE
AYRQRAEKVAMELMLEKKCTDELDDALKRSVFGQARIIEHYAELQEKYNDLAEKHKLILQ
GIQDVKNAAAKAGKKGHGARFAKSLAAELSALRVEREREREMLKKENKSLRVQLKDTAEA
VHAAGELLVRLREAEETASLAEENFTQSKEENERLKKQIEKLKRKHKMEMITMKQYLAES
RLPEAALRPPIYRQDSDVANNDNNNTIQHSEYDDDQSWRAEFGAIYQEHI*

Transcript Sequence

Transcript ID

PGSC0003DMT400057119
Transcript Infomation

pacid=37433389 locus=PGSC0003DMG400022190 ID=PGSC0003DMT400057119.v4.03 annot-version=v4.03
Sequence

ATGTCAGAAAACAGATTCTTAGGCAACATTTCTGCCTCTTCGTTCCGAAATCTACTTCCA
AAATCAGTTTCAACTAAGAAAAAGTTGAGTTCAAGCCGATTTAAACACAAAATGAACAGT
GAAAATGTTGCTCCTATAGATCCCAACATTCAGATCAGTGATCCACCGTTGTTACCTACA
AGTTCGATACTTAAAAAACCCGTCTTGAAGACGATTGATAGTGATGTATCGGCAGAACTC
ACCAGATCTGTTGCACAGGAACAAACATCAGAAGCTCCTGATCCACCAGTTAAGGTTGTT
GCAAGGATTAGGCCTGCTAATGGTATTGAGAGTGGAAGCCAAGCTGTTCGCAAAGTTTCT
GATACCTCAGTGTGCGTTGCTGATAGAAAGTTTAACTTTGACATGGTTTTTGGTTCAAAT
TCGAATCAGGAAGACATATTTCAATCGGTTGGTGCCCCTTTAGTTAAGGATGCATTGGCA
GGTTACAACACTTCTCTCTTAGCTTATGGACAGACCGGAAGTGGCAAGACTTATACAATG
TGGGGACCTCCTAGTTCCATTGTTGAAGTTCCATCACCTAATGGTCTTCAAGGCATTGTG
CCGCGCATTTTCCAGACGTTGTTTTCTAGCATACAAAAGGAGCAAGAGAACTCTGAAGGT
AAACAGATAAATTACCAGTGTCGTTGCTCATTCCTAGAGATATATGATGAACACATTGGG
GATCTACTTGATCCTACACAGAGAAACTTAAAGATAATGGATGATCCAAGAGTTGGATTC
TATGTTGAGAACATAACTGAGGAATATGTGTCTACCTATGAGGACGTATCCCAAATGTTG
ATTAAGGGCCTTTCAAGTAGAAAAGTTGGATCAACGAGCATCAATTCGAAGAGTTCTAGG
TCCCATATTGTTTTTACCTGCGTCATTGAGTCCTGGTGCAAGGAGTCCTCATCAACGTGT
TTTGGTAGCTCAAAGATGAGCAGAATGAGCCTTGTTGATCTTGCTGGATTTGACAAAAAT
ATACCTGATGATGCCGGTAAACAGTTTGTTAAGGAAGGGAAGTACGTAAAGAAGTCCACA
TCACTGCTCGGGCATTTGGTTAATGTCCTCTCTGAAAGGAGTCAGTCCAGGAAACTTGAG
GATGTTTCGTACAGCAGTTCCACTTTGACTCATTTAATGAGAGAATCACTTGGAGGGAAT
GCTAAACTCTCCGTCATATGTGCTATCAGCCCAGAAAACAAGCATAATAGTGAAACAGTA
AGCACTCTGAGATTTGGGAAACGGGTGAAACTCATACCAAATGAGCCATTGGTAAATGAA
ATAACAGAAGACGATGTTAATGGCCTGAGTGATCAGATTCGCCAATTGAAGGAAGAGCTT
ATAAGAGCTCGGTCAAGTGCAAGCATTTCAGTCGGAAGCAACTATGGATCCTTCAGAGGA
CCAAATGTACGTGAAAGCTTGAATCAGTTGAGAGTGAGCCTTAACCGTTCACTGATCTTA
CCTAACATAGATAATGAGCGTGAAGAAGAAGAGGTTCACATAAATGAGGATGATATAAAA
GAACTACAGCTCCAGATCGATAACTTACGTGGTTCACGTGGAAATAACTCAAACTCTCTC
AAGTATTCATCTGGAGAAAGTGAACACTATATCAGCTGTTCAGAAGAAAGTGAAGGTGAA
GAAATTAACTCAGAAGAGATACTGGAGGAGACCCTTGATGCTGACCACGAGATGGAAACA
CTGCAGCCTGAATACTGTAGCAGCATCTCAATCGGCCCATCTCGCCATTCTGCTGATCTT
CCGGGCCCGGTGTTATCTGAGTCCCCAAAGTTTCGGAACATGCAGAGGAAGAGCTTAATT
ATCTCCAGTGAAGATAATATTCAATGTTCCTCCAAAAGTTCTGAATTGCCGTCCCTACCA
CAGAAACAAGACCTTGTCCAGTCTTCTTTGAGGTCCAGCAGAATATTTCCTGGGCCAACT
GAATCCTTGGCTGCCAGTCTACATAGAGGACTAGAGATCATTGATTATCACCAAAGGAAT
TCCGCATCAAATAAATCTTTAGTTTCCTTCTCTTTTGAACATTTGGCAGTGAACCCAAGC
TCAATGTCAAATGATAAGGCAAATGCTTCTATTCAAACATCATCCGAAGAAGGACAAACT
TCTCCTTTTGTAGCCACTTCATTTCTGTGCCCAAAGTGCAAGACGAAAGCAACTTCCTCT
AGTGTTGTTAAGGATAGCACTGGGACATGGATGGTCCCCATGGAAGGGGCAAGTACGGAA
CAAGATTCGGAGAAAGTTTTGTTCCAAGCTCTAGAGAGAGAGAAGCAGCTTGAAAGTGTA
TGCAAGGATCAAGCAGACAAACTTGAGCAGCTAAACCAACTACTAGCACACTGTAAATGC
ACAAAAGAACAGAGTTCTCTAGTTGACTGTGGCAACGATGTTGTTGATCTCCACGACAAT
GAGAATCAAGCTTCACTAATCTATCAGAATGGGAGTCAATCACCCAACATCCCAAAGCTC
CTGAAGTGGGATGATGAAAGTCCTGAGCCTGAAGCTGCAGGAGAGAAGTATGAAACTAAA
GAAATTCAGGGCAATGTGGAAAACTGTGGTGGGAAAAAAATGTTTGATATGGCTGAGAGA
GAAGCACTACTTGAAGAAATTGGAGGCCTAAGGTCCCAATTGAAGTCAGATGGAGCATCT
ACAAATAAATCAATTGAAAGAACCAGATCCTCTTTGTTAGCACAATCAATGCAGCTGAGA
AAGAGTGGTGTATATGCAGCTACAAGTTCTGGTGAAGAACTTGAGAAGGAAAGAGAAAGA
TGGACTGAAATGGAGAGCGAGTGGATTTGTCTAACTGATGAGCTTAGAATTGATCTTGAG
GCTTATCGCCAGCGTGCAGAAAAGGTGGCAATGGAATTAATGTTGGAGAAGAAATGCACA
GATGAGTTGGATGATGCCCTCAAAAGATCGGTCTTTGGGCAAGCCAGAATAATTGAGCAT
TATGCAGAATTACAGGAGAAGTACAATGACTTAGCTGAGAAGCATAAGTTGATCTTGCAA
GGGATACAAGATGTGAAAAATGCTGCAGCAAAAGCAGGAAAGAAAGGTCATGGTGCTCGT
TTTGCCAAATCTCTTGCTGCGGAGCTCTCAGCTTTGAGAGTGGAAAGGGAAAGAGAGAGG
GAAATGCTGAAAAAGGAGAATAAAAGCTTGAGAGTTCAACTTAAAGACACTGCTGAAGCT
GTTCATGCTGCAGGAGAACTTCTTGTTAGATTGAGAGAAGCTGAGGAAACAGCTTCACTT
GCTGAGGAGAACTTTACACAATCAAAGGAAGAGAATGAGAGATTGAAGAAGCAAATAGAG
AAGCTGAAGAGAAAACATAAGATGGAGATGATAACAATGAAACAGTATCTTGCTGAGAGC
CGATTGCCAGAAGCAGCGTTGAGACCGCCAATTTACAGGCAAGACTCTGATGTAGCAAAC
AATGACAACAACAACACCATCCAACATTCTGAGTACGATGATGATCAATCATGGAGAGCA
GAATTTGGTGCCATTTATCAAGAACACATATGA