Plant GARDEN
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TOP > About the Species(Solanum tuberosum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400057109
CDS Infomation

pacid=37433620 polypeptide=PGSC0003DMP400038398 locus=PGSC0003DMG400022185 ID=PGSC0003DMT400057109.v4.03 annot-version=v4.03
Sequence

ATGGACCCTTCTGAGGCAAAGAAACGTGTGTATGAAAAAGTCATGAAATTTGAACCTGAA
AAGGTTGCAAGGGAGATTATAGGCTATATTTTCTTGCAAGACTATCCAGAGCAGGAAATG
ATTCGATTAGCGTTAGGCCCTGATACGTTAATTCGCAATGTGATCCAGGAAGCAAAAGAT
ACATTTGACGTAAACTCAACTCCAGTGTTCCGCAGCCCTTCTATGACTGCAGTCAATATA
GTAGATCCAGCACTACGGTTTGCAAATTTTTCATCCTCTTACCCTGTATCGGCTCCTCGC
TGCAAACCTCAACTCTCTGATGAACATTCTTATTTAGCTGAAATTCTCTACTCCAGCAAT
GAGCCACCGCAACAGTTCCACCCTCTTGAGGAAAAAATGTACTTTGAGAATTTGAATTAC
CCAAGTGATTACTGCTATCCAGAAGCTCCCCTTATCAGGCGCTACAGAAATTCTCCAAGT
TCGTTTAAATTTCCGAAACCTTGCCACTATTTCAACAAAGGGTTCTGTAGAAATGGTGAC
AGCTGTAGGTACTTTCATGGTCCATTTCCCGAGAGCTACCCACTTACGATTAATCCTAAT
CTTTGTGAAAATGGTGATGAAGATGAAGTACTTTCACCTGGTTCCCTTGAGAAATTAGAA
CTAGAGATAACGGAGCTCTTGAAAGAAAAGAACGGGAATCCTGTTTCAATTGCATCCCTG
CCCATGATGTATTATGGGAAGTACGGGAGAACACTCCAAGCGGAAGGGTATCTAACCGAG
AGCCAAAGAAATGGTAAAGCTGGCTATAATTTGACAAAGCTTCTTGCTCGATTGAAGTTT
GTTCATCTGATTGAAAGGCCTCATGGACAACATTCTGTAGTTCTGGCTCAAGATGCAGCG
AAGTACATGGACCCTCATGGTGTAAGAAGTGATCCAGGTCCTATCGTTAGTGATTCACGT
CAAATATATTTGACATTCCCTGCTGAAAGCACTTTTACGGAGGAAGATGTCTCTGCTTAC
TTCGACACTTTTGGGCCAGTTCAAGATGTACGAATGCCATGTCAGCAGAAACGAATGTTT
GGATTTGTTACATTCTTCAGCACAGATACTGTAAAAATGGTTTTGTCAACAGGAAATCCA
CATTATGTGTGCGGTGCTCGCGTTCTTGTCAAACCTTATAGGGAGAAGTCTAAGCTATCT
GAAAGAAAGCACCAGGAGAGACTGGAGTCGTCAATATTTTACCACTTCGATTCTAGGCTT
CAAGAAAAATTTAAGTCCCCTAGAATGCTACGGAAACATTTAATGGAAGAGCAATTCCTT
GAACATGAGGCTAGGCGACTTGCACAGCTGCAGTTATCGCAAAAACGCATGGCCACTCTG
CCCTATTTTGTCCCTCCCATGGACGAATTTAACATTTCTCAACCAGAACATTCCAGCCAT
CTATTAGATGTTCGGAACAATGGATCCCCGGATGAAGATAATTCCAAGAATTCAGATGAA
AGCCATTATGCTGATGACGATAGCAATCAACGAATCAACCTGCCAGACAGTCCATTCGCA
TCAAGAGTAGCGAGCAGTATAGCTGAATTTTTATAG

Peptide Sequence

PEP ID

PGSC0003DMP400038398
PEP Infomation

pacid=37433620 transcript=PGSC0003DMT400057109 locus=PGSC0003DMG400022185 ID=PGSC0003DMT400057109.v4.03 annot-version=v4.03
Sequence

MDPSEAKKRVYEKVMKFEPEKVAREIIGYIFLQDYPEQEMIRLALGPDTLIRNVIQEAKD
TFDVNSTPVFRSPSMTAVNIVDPALRFANFSSSYPVSAPRCKPQLSDEHSYLAEILYSSN
EPPQQFHPLEEKMYFENLNYPSDYCYPEAPLIRRYRNSPSSFKFPKPCHYFNKGFCRNGD
SCRYFHGPFPESYPLTINPNLCENGDEDEVLSPGSLEKLELEITELLKEKNGNPVSIASL
PMMYYGKYGRTLQAEGYLTESQRNGKAGYNLTKLLARLKFVHLIERPHGQHSVVLAQDAA
KYMDPHGVRSDPGPIVSDSRQIYLTFPAESTFTEEDVSAYFDTFGPVQDVRMPCQQKRMF
GFVTFFSTDTVKMVLSTGNPHYVCGARVLVKPYREKSKLSERKHQERLESSIFYHFDSRL
QEKFKSPRMLRKHLMEEQFLEHEARRLAQLQLSQKRMATLPYFVPPMDEFNISQPEHSSH
LLDVRNNGSPDEDNSKNSDESHYADDDSNQRINLPDSPFASRVASSIAEFL*

Transcript Sequence

Transcript ID

PGSC0003DMT400057109
Transcript Infomation

pacid=37433620 locus=PGSC0003DMG400022185 ID=PGSC0003DMT400057109.v4.03 annot-version=v4.03
Sequence

ATGGACCCTTCTGAGGCAAAGAAACGTGTGTATGAAAAAGTCATGAAATTTGAACCTGAA
AAGGTTGCAAGGGAGATTATAGGCTATATTTTCTTGCAAGACTATCCAGAGCAGGAAATG
ATTCGATTAGCGTTAGGCCCTGATACGTTAATTCGCAATGTGATCCAGGAAGCAAAAGAT
ACATTTGACGTAAACTCAACTCCAGTGTTCCGCAGCCCTTCTATGACTGCAGTCAATATA
GTAGATCCAGCACTACGGTTTGCAAATTTTTCATCCTCTTACCCTGTATCGGCTCCTCGC
TGCAAACCTCAACTCTCTGATGAACATTCTTATTTAGCTGAAATTCTCTACTCCAGCAAT
GAGCCACCGCAACAGTTCCACCCTCTTGAGGAAAAAATGTACTTTGAGAATTTGAATTAC
CCAAGTGATTACTGCTATCCAGAAGCTCCCCTTATCAGGCGCTACAGAAATTCTCCAAGT
TCGTTTAAATTTCCGAAACCTTGCCACTATTTCAACAAAGGGTTCTGTAGAAATGGTGAC
AGCTGTAGGTACTTTCATGGTCCATTTCCCGAGAGCTACCCACTTACGATTAATCCTAAT
CTTTGTGAAAATGGTGATGAAGATGAAGTACTTTCACCTGGTTCCCTTGAGAAATTAGAA
CTAGAGATAACGGAGCTCTTGAAAGAAAAGAACGGGAATCCTGTTTCAATTGCATCCCTG
CCCATGATGTATTATGGGAAGTACGGGAGAACACTCCAAGCGGAAGGGTATCTAACCGAG
AGCCAAAGAAATGGTAAAGCTGGCTATAATTTGACAAAGCTTCTTGCTCGATTGAAGTTT
GTTCATCTGATTGAAAGGCCTCATGGACAACATTCTGTAGTTCTGGCTCAAGATGCAGCG
AAGTACATGGACCCTCATGGTGTAAGAAGTGATCCAGGTCCTATCGTTAGTGATTCACGT
CAAATATATTTGACATTCCCTGCTGAAAGCACTTTTACGGAGGAAGATGTCTCTGCTTAC
TTCGACACTTTTGGGCCAGTTCAAGATGTACGAATGCCATGTCAGCAGAAACGAATGTTT
GGATTTGTTACATTCTTCAGCACAGATACTGTAAAAATGGTTTTGTCAACAGGAAATCCA
CATTATGTGTGCGGTGCTCGCGTTCTTGTCAAACCTTATAGGGAGAAGTCTAAGCTATCT
GAAAGAAAGCACCAGGAGAGACTGGAGTCGTCAATATTTTACCACTTCGATTCTAGGCTT
CAAGAAAAATTTAAGTCCCCTAGAATGCTACGGAAACATTTAATGGAAGAGCAATTCCTT
GAACATGAGGCTAGGCGACTTGCACAGCTGCAGTTATCGCAAAAACGCATGGCCACTCTG
CCCTATTTTGTCCCTCCCATGGACGAATTTAACATTTCTCAACCAGAACATTCCAGCCAT
CTATTAGATGTTCGGAACAATGGATCCCCGGATGAAGATAATTCCAAGAATTCAGATGAA
AGCCATTATGCTGATGACGATAGCAATCAACGAATCAACCTGCCAGACAGTCCATTCGCA
TCAAGAGTAGCGAGCAGTATAGCTGAATTTTTATAG