Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400057102
CDS Infomation

pacid=37434729 polypeptide=PGSC0003DMP400038393 locus=PGSC0003DMG400022184 ID=PGSC0003DMT400057102.v4.03 annot-version=v4.03
Sequence

ATGGATGCTGCAGTTTTTAATCCATCTTCATTCATTACTACTTGTAATAAACGTTCGTAT
CCAGGCGTTTATACTCGTCAATTAGGAATACCCATTAAGCTATCTGCTAATAACCTTCGT
TACTCTTGTGGGGTTGCGTCAAATTTTGTTCTTCCTTACAATTCGAGGTGTAATTTTAGG
AATGGGATTTGTTTATCTGTTAAAGGAGGTAAAGGGGAGTTTCAGAATGCTGAAGATTCT
TCTGGGTCGTGCTTGAAAATACCATTTATGCATTTCCTGCTGAAAAAAGGGGTGATTTTG
GTTGGGGTGATATGTGGGGTTTTCATAATTGGGTGCAGAAGAGTGTTTGCTGTTGAAGGG
GTTTTAAATGGGGGATATGGTGTTTTAGAGCAGGGTTTGGTTTTGTTGAGGAGTTATTGG
CCTACGGTTTTGTTGGTTCTCAGGATGTTTAAAGAACAAGGTTTGATTCTTGCGGCGCTT
CTTAGTCTTTCTGCATTTTTTTCAATGGCTGAGACATCAATAACTACGCTTTGGCCGTGG
AAGGTACGAGAGTTAGCTGAAAAAGAATCTGACAATGAAGGAGTCTTCAAAATGTTGAGA
AGTGATGTTACTCGATTCCTTACAACTATACTCATTGGAACAACCGTTGTCAATATTGCA
GCTACAGCATTAGTTACTGAGGCTGCAACTGCAGCATTTGGTGAAGCCGGTGTGAGTGCA
GCAACTGGAGTTATGACGGTTGCGATCCTGCTCCTAACGGAAATTACTCCAAAAAGTATT
GCTGTTCACAATGCCACAGAAGTTGCTAGGTTTGTGGTTAGGCCAGTTGCATGGCTTTCC
TTGATACTATATCCAGTTGGAAGAGTTGTGACATATCTATCAATGGGAATGCTAAAACTC
CTCGGCTTGAAAGGAAGAAGTGAACCATATGTCACTGAGGATGAATTGAAGTTGATGCTG
CGTGGGGCGGAGTTAAGTGGCGCAATTGAGGAGGAAGAGCAGGATATGATTGAAAATGTG
TTGGAGATTAAAGATACTCATGTCAGGGAGGTAATGACACCTCTTGTTGATGTTGTTGCA
ATCGATGCCAGTGCAACGTTAGTTGATTTCCATAGTTTGTGGGTGACACATCAGTACTCC
AGGGTGCCCGTTTTTGAGCAACGTATAGATAATATTGTTGGCATTGCATATGCCATGGAT
CTCCTAGATTATGTACAAAAGGGAGAACTGCTGGAAAGTTCTGTTGTGGGAGATATGGCA
CATAAACCTGCATACTTTGTTCCTGATTCTATGTCAGTGTGGAACCTTCTTAGAGAGTTC
CGCATCAGAAAGGTACACATGGCTGTTGTTCTTAATGAGTATGGAGGAACCATTGGAATT
GTAACCCTTGAAGATGTGGTCGAGGAAATTGTTGGTGAAATCTTTGATGAAAATGATTCA
AAAGAGGAAATCCAGAAAAAAACTGGCTATATTGTCATGCGGGCTGAGGGAATATACGAT
GTTGATGCAAATACCTCCATTGACCAGCTCTCTGAAGATCTCAATATTAAAATGCCAGAG
GACCATCAATATGAGACAGTCTCTGGTTTTGTCTGCGAAGCATTTGGATATATCCCAAGG
ACAGGTGAGACGATTAAGCTTATACTGGAAAGGGGAAATGAAGACGAGGACAACAATTAC
AATGAAACAGAATCTGATCGAACAGACCACAATGAAAAGAACCAAACTTTTAAGCTTGAG
ATATTGGCAGGGAATGCCAGAAAGGTTAGTGCTGTTCGATTTGAACGGATCAATGACGAT
GTAGAAGTAGAGACAAGTGAGGTAACACGACTCGTTCCAAAAATTATGACTAGGAAGAGG
AAGAGTAACGGAGGCTCGGATAGAAGCAACCACGACGAGATCTCTTTTATGGAGAGGAGA
GATGAGGATGACAATTCCAACAATTTTGTTATAGCTGAACGTGAGGACAACCTTGATGTT
GCAAATAAACAATAG

Peptide Sequence

PEP ID

PGSC0003DMP400038393
PEP Infomation

pacid=37434729 transcript=PGSC0003DMT400057102 locus=PGSC0003DMG400022184 ID=PGSC0003DMT400057102.v4.03 annot-version=v4.03
Sequence

MDAAVFNPSSFITTCNKRSYPGVYTRQLGIPIKLSANNLRYSCGVASNFVLPYNSRCNFR
NGICLSVKGGKGEFQNAEDSSGSCLKIPFMHFLLKKGVILVGVICGVFIIGCRRVFAVEG
VLNGGYGVLEQGLVLLRSYWPTVLLVLRMFKEQGLILAALLSLSAFFSMAETSITTLWPW
KVRELAEKESDNEGVFKMLRSDVTRFLTTILIGTTVVNIAATALVTEAATAAFGEAGVSA
ATGVMTVAILLLTEITPKSIAVHNATEVARFVVRPVAWLSLILYPVGRVVTYLSMGMLKL
LGLKGRSEPYVTEDELKLMLRGAELSGAIEEEEQDMIENVLEIKDTHVREVMTPLVDVVA
IDASATLVDFHSLWVTHQYSRVPVFEQRIDNIVGIAYAMDLLDYVQKGELLESSVVGDMA
HKPAYFVPDSMSVWNLLREFRIRKVHMAVVLNEYGGTIGIVTLEDVVEEIVGEIFDENDS
KEEIQKKTGYIVMRAEGIYDVDANTSIDQLSEDLNIKMPEDHQYETVSGFVCEAFGYIPR
TGETIKLILERGNEDEDNNYNETESDRTDHNEKNQTFKLEILAGNARKVSAVRFERINDD
VEVETSEVTRLVPKIMTRKRKSNGGSDRSNHDEISFMERRDEDDNSNNFVIAEREDNLDV
ANKQ*

Transcript Sequence

Transcript ID

PGSC0003DMT400057102
Transcript Infomation

pacid=37434729 locus=PGSC0003DMG400022184 ID=PGSC0003DMT400057102.v4.03 annot-version=v4.03
Sequence

ATGGATGCTGCAGTTTTTAATCCATCTTCATTCATTACTACTTGTAATAAACGTTCGTAT
CCAGGCGTTTATACTCGTCAATTAGGAATACCCATTAAGCTATCTGCTAATAACCTTCGT
TACTCTTGTGGGGTTGCGTCAAATTTTGTTCTTCCTTACAATTCGAGGTGTAATTTTAGG
AATGGGATTTGTTTATCTGTTAAAGGAGGTAAAGGGGAGTTTCAGAATGCTGAAGATTCT
TCTGGGTCGTGCTTGAAAATACCATTTATGCATTTCCTGCTGAAAAAAGGGGTGATTTTG
GTTGGGGTGATATGTGGGGTTTTCATAATTGGGTGCAGAAGAGTGTTTGCTGTTGAAGGG
GTTTTAAATGGGGGATATGGTGTTTTAGAGCAGGGTTTGGTTTTGTTGAGGAGTTATTGG
CCTACGGTTTTGTTGGTTCTCAGGATGTTTAAAGAACAAGGTTTGATTCTTGCGGCGCTT
CTTAGTCTTTCTGCATTTTTTTCAATGGCTGAGACATCAATAACTACGCTTTGGCCGTGG
AAGGTACGAGAGTTAGCTGAAAAAGAATCTGACAATGAAGGAGTCTTCAAAATGTTGAGA
AGTGATGTTACTCGATTCCTTACAACTATACTCATTGGAACAACCGTTGTCAATATTGCA
GCTACAGCATTAGTTACTGAGGCTGCAACTGCAGCATTTGGTGAAGCCGGTGTGAGTGCA
GCAACTGGAGTTATGACGGTTGCGATCCTGCTCCTAACGGAAATTACTCCAAAAAGTATT
GCTGTTCACAATGCCACAGAAGTTGCTAGGTTTGTGGTTAGGCCAGTTGCATGGCTTTCC
TTGATACTATATCCAGTTGGAAGAGTTGTGACATATCTATCAATGGGAATGCTAAAACTC
CTCGGCTTGAAAGGAAGAAGTGAACCATATGTCACTGAGGATGAATTGAAGTTGATGCTG
CGTGGGGCGGAGTTAAGTGGCGCAATTGAGGAGGAAGAGCAGGATATGATTGAAAATGTG
TTGGAGATTAAAGATACTCATGTCAGGGAGGTAATGACACCTCTTGTTGATGTTGTTGCA
ATCGATGCCAGTGCAACGTTAGTTGATTTCCATAGTTTGTGGGTGACACATCAGTACTCC
AGGGTGCCCGTTTTTGAGCAACGTATAGATAATATTGTTGGCATTGCATATGCCATGGAT
CTCCTAGATTATGTACAAAAGGGAGAACTGCTGGAAAGTTCTGTTGTGGGAGATATGGCA
CATAAACCTGCATACTTTGTTCCTGATTCTATGTCAGTGTGGAACCTTCTTAGAGAGTTC
CGCATCAGAAAGGTACACATGGCTGTTGTTCTTAATGAGTATGGAGGAACCATTGGAATT
GTAACCCTTGAAGATGTGGTCGAGGAAATTGTTGGTGAAATCTTTGATGAAAATGATTCA
AAAGAGGAAATCCAGAAAAAAACTGGCTATATTGTCATGCGGGCTGAGGGAATATACGAT
GTTGATGCAAATACCTCCATTGACCAGCTCTCTGAAGATCTCAATATTAAAATGCCAGAG
GACCATCAATATGAGACAGTCTCTGGTTTTGTCTGCGAAGCATTTGGATATATCCCAAGG
ACAGGTGAGACGATTAAGCTTATACTGGAAAGGGGAAATGAAGACGAGGACAACAATTAC
AATGAAACAGAATCTGATCGAACAGACCACAATGAAAAGAACCAAACTTTTAAGCTTGAG
ATATTGGCAGGGAATGCCAGAAAGGTTAGTGCTGTTCGATTTGAACGGATCAATGACGAT
GTAGAAGTAGAGACAAGTGAGGTAACACGACTCGTTCCAAAAATTATGACTAGGAAGAGG
AAGAGTAACGGAGGCTCGGATAGAAGCAACCACGACGAGATCTCTTTTATGGAGAGGAGA
GATGAGGATGACAATTCCAACAATTTTGTTATAGCTGAACGTGAGGACAACCTTGATGTT
GCAAATAAACAATAG