Plant GARDEN
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TOP > About the Species(Solanum tuberosum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400057094
CDS Infomation

pacid=37433594 polypeptide=PGSC0003DMP400038386 locus=PGSC0003DMG400022180 ID=PGSC0003DMT400057094.v4.03 annot-version=v4.03
Sequence

ATGGCAGAATCACCGAAAGATGATCCTATGTCTCCATTATTCAGTGTCCAATCAACAGAT
ATGGCAAGTAACAAGGGTTCTATAACAAGAAACTTGAGAGTTCATTCTTCCGACATAGTT
TGGTCAGGTGAACCATGGATATGTAGTAAACAGCTCAAACACTACCCAACATTTTCCCGG
AATGGGATCACAATCGCTGTACATGCATTCGTCTTTGTCATGGCTGAAAAGGAAAATCAG
TACCTTGCATATCTTGAAGATATGTATGAGGACCGGAAGGGCCAGAAAAAAGTCAAAGTG
AGATGGTTCCACTTTAATAGGGAAGTGAGAGGGGTTGTCTCTTTAAGAAATCCTCATCCT
AGAGAGGTTTTCATCACTCCTTATGCTCAGGTCATTAGTGCAGAGTGTATTGATGGTCCG
GCCATTGTCTTAACTCGGGAACATTATGAGAAATGTGTAGCTGTTTTCCCAAATGACTTG
CTAACAAGAGTACATTTTTGCTTCAGACAATTTAAGGGCAACAGAGTAAAACCTTTTGAA
CTAGGTAAATTGCGCGGTTACCTTGATCAATCAATTTTCTCATGTTTCAGTCCAGATTTC
TTTGAAGAAGAAGAATTTAGTGCTAAGGATGATGTAAAAGTTGGAGCTAAAAGGCCAAGA
AAGAAATATAAGGAGCATCAGATGACAGCATATGAAGAGTCTTACAAGAAGTTCAAAAAT
GGTTTTTTAAGTAGGAAATTTAACTCCAATAAGCATGTTGGAAGTGAGCTTTGGTATACT
CCTAAGTTTGTGGTTAATGAGAAGATAGAATGTCTGAGCCAAGATAGTGGGATCCGAGGC
TGCTGGTTCAGATGCACCATTGTGGAAATATCCCGGAGACAGATGAAAATAAAGTATGAT
GATATTAAGGATGAAGATGGATGTGGAAACCTTGAGGAATGGATCCCTACATTTAGACTT
GCCAAGCCTGATAAACTTGGAATGAGAAACTCTAACCGTCCAACAATCAGGCCTTCCCGC
CCTTGTGACCTGGAAGATCTTGCCTTTGATGTGGGAGCACCTATTGATGCCTGGTGGAGT
GATGGTTGGTGGGAAGGAATAATTGTCGACGCAGACAAATCAGAAAAGGAAACCTATAGA
GTTTATGTTCCTGGTGAGAGGATGTTCTTGAATATAGATAGAAAGAATCTAAGAATCTCA
AGGGATTGGGTGGGAGATCGATGGGTAGATATCGAAACAAACAGAGACATTCTTTCAATG
ATATCTTTGATCCAAGAAACCAAGATTTCTGTATCAAGTATTACTTCAGAGCGCCAGCGT
GCTAGTCCTATGGATCATAAAATTCACTCGAGTAGCGTGGATGAAGAAGCTGCTCGTGGT
TCTACAGAAGCAAGATCAGTTGATCACCATTCAAAACATTCAATCGGTGTCAATATTGAG
AAGCAAGAAGATCACATTACAGAAAAGCGACTAACTGATAACTCCACTAGAGATATAGAC
TTGATTAAGGATGAGAAGCATGCAACTGAAAACAAATCCGATGAGAATGATTGTAATAAC
AGCAGCAGCAGTGGCAGCGACAAGCATGACTTAGACTGCCAACTTAGCGATGATAATGAT
TCTTACAACACGGACATTGACAACGACACTAACAAGGACAGCAATGTGGAAAAATCATCA
GAACCTGAGATTGATGGGGGAAAATGCGAAACAGAAGTAATGGATATGGTGGCGTGA

Peptide Sequence

PEP ID

PGSC0003DMP400038386
PEP Infomation

pacid=37433594 transcript=PGSC0003DMT400057094 locus=PGSC0003DMG400022180 ID=PGSC0003DMT400057094.v4.03 annot-version=v4.03
Sequence

MAESPKDDPMSPLFSVQSTDMASNKGSITRNLRVHSSDIVWSGEPWICSKQLKHYPTFSR
NGITIAVHAFVFVMAEKENQYLAYLEDMYEDRKGQKKVKVRWFHFNREVRGVVSLRNPHP
REVFITPYAQVISAECIDGPAIVLTREHYEKCVAVFPNDLLTRVHFCFRQFKGNRVKPFE
LGKLRGYLDQSIFSCFSPDFFEEEEFSAKDDVKVGAKRPRKKYKEHQMTAYEESYKKFKN
GFLSRKFNSNKHVGSELWYTPKFVVNEKIECLSQDSGIRGCWFRCTIVEISRRQMKIKYD
DIKDEDGCGNLEEWIPTFRLAKPDKLGMRNSNRPTIRPSRPCDLEDLAFDVGAPIDAWWS
DGWWEGIIVDADKSEKETYRVYVPGERMFLNIDRKNLRISRDWVGDRWVDIETNRDILSM
ISLIQETKISVSSITSERQRASPMDHKIHSSSVDEEAARGSTEARSVDHHSKHSIGVNIE
KQEDHITEKRLTDNSTRDIDLIKDEKHATENKSDENDCNNSSSSGSDKHDLDCQLSDDND
SYNTDIDNDTNKDSNVEKSSEPEIDGGKCETEVMDMVA*

Transcript Sequence

Transcript ID

PGSC0003DMT400057094
Transcript Infomation

pacid=37433594 locus=PGSC0003DMG400022180 ID=PGSC0003DMT400057094.v4.03 annot-version=v4.03
Sequence

ATGGCAGAATCACCGAAAGATGATCCTATGTCTCCATTATTCAGTGTCCAATCAACAGAT
ATGGCAAGTAACAAGGGTTCTATAACAAGAAACTTGAGAGTTCATTCTTCCGACATAGTT
TGGTCAGGTGAACCATGGATATGTAGTAAACAGCTCAAACACTACCCAACATTTTCCCGG
AATGGGATCACAATCGCTGTACATGCATTCGTCTTTGTCATGGCTGAAAAGGAAAATCAG
TACCTTGCATATCTTGAAGATATGTATGAGGACCGGAAGGGCCAGAAAAAAGTCAAAGTG
AGATGGTTCCACTTTAATAGGGAAGTGAGAGGGGTTGTCTCTTTAAGAAATCCTCATCCT
AGAGAGGTTTTCATCACTCCTTATGCTCAGGTCATTAGTGCAGAGTGTATTGATGGTCCG
GCCATTGTCTTAACTCGGGAACATTATGAGAAATGTGTAGCTGTTTTCCCAAATGACTTG
CTAACAAGAGTACATTTTTGCTTCAGACAATTTAAGGGCAACAGAGTAAAACCTTTTGAA
CTAGGTAAATTGCGCGGTTACCTTGATCAATCAATTTTCTCATGTTTCAGTCCAGATTTC
TTTGAAGAAGAAGAATTTAGTGCTAAGGATGATGTAAAAGTTGGAGCTAAAAGGCCAAGA
AAGAAATATAAGGAGCATCAGATGACAGCATATGAAGAGTCTTACAAGAAGTTCAAAAAT
GGTTTTTTAAGTAGGAAATTTAACTCCAATAAGCATGTTGGAAGTGAGCTTTGGTATACT
CCTAAGTTTGTGGTTAATGAGAAGATAGAATGTCTGAGCCAAGATAGTGGGATCCGAGGC
TGCTGGTTCAGATGCACCATTGTGGAAATATCCCGGAGACAGATGAAAATAAAGTATGAT
GATATTAAGGATGAAGATGGATGTGGAAACCTTGAGGAATGGATCCCTACATTTAGACTT
GCCAAGCCTGATAAACTTGGAATGAGAAACTCTAACCGTCCAACAATCAGGCCTTCCCGC
CCTTGTGACCTGGAAGATCTTGCCTTTGATGTGGGAGCACCTATTGATGCCTGGTGGAGT
GATGGTTGGTGGGAAGGAATAATTGTCGACGCAGACAAATCAGAAAAGGAAACCTATAGA
GTTTATGTTCCTGGTGAGAGGATGTTCTTGAATATAGATAGAAAGAATCTAAGAATCTCA
AGGGATTGGGTGGGAGATCGATGGGTAGATATCGAAACAAACAGAGACATTCTTTCAATG
ATATCTTTGATCCAAGAAACCAAGATTTCTGTATCAAGTATTACTTCAGAGCGCCAGCGT
GCTAGTCCTATGGATCATAAAATTCACTCGAGTAGCGTGGATGAAGAAGCTGCTCGTGGT
TCTACAGAAGCAAGATCAGTTGATCACCATTCAAAACATTCAATCGGTGTCAATATTGAG
AAGCAAGAAGATCACATTACAGAAAAGCGACTAACTGATAACTCCACTAGAGATATAGAC
TTGATTAAGGATGAGAAGCATGCAACTGAAAACAAATCCGATGAGAATGATTGTAATAAC
AGCAGCAGCAGTGGCAGCGACAAGCATGACTTAGACTGCCAACTTAGCGATGATAATGAT
TCTTACAACACGGACATTGACAACGACACTAACAAGGACAGCAATGTGGAAAAATCATCA
GAACCTGAGATTGATGGGGGAAAATGCGAAACAGAAGTAATGGATATGGTGGCGTGA