Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400057017
CDS Infomation

pacid=37432785 polypeptide=PGSC0003DMP400038322 locus=PGSC0003DMG400022163 ID=PGSC0003DMT400057017.v4.03 annot-version=v4.03
Sequence

ATGCTGCATTCTGTTTGCTTGGCATCTCCACTTCACTCTCCAAAACTCAAAGACTCCATT
AATGGCACTTCAGAAATACCCAATACTACCCTTCTCCACCATTTCACTTCTCCATTCGAG
CTCAAACAAGCTGTTGCGTTTCTCATCAAAACCAATAAACCTCTTTCACTACTCCCACTT
TCTCGGGTAGCTTCCATTTGCGCACTTTCTCCCGATTTCCCCTTTGCTCAACAGATTTTC
AGCTCTGTTGAACAGCAAGAAGTTTCTATATGGAATAGCTGTTTGAGAAATCTTGCTGAA
GGTAGTTCTTTAATTGATGCAATTTTCTTGTTTCATCAAATGCGTAGTTACAATGTGAGT
CTTGACTGTTTCACTTGCTCATTTGTTCTTAAGGCTTGTGTTGGGTTACGGGATCTTTTA
CGTGGGAGAGTTGTTCATGGGTATGTAGAGAAACTTGGGTTTCAATCGAATTTAGTTTTG
TTAAATGCACTTCTTCATTTGTATGCTACTTGTGGAGCAATGGCTGATGCGAACCTTCTG
TTCGATAAAATGCCTCAACGAGATGTTGTGTCCTGGAACATAATGATTACCCAATTAGCG
AAAAAGGGTGATGTTGATGGGGCGTTTGACTTGTTTGAGAAAATGCCTGAGAGAAATTTA
AGGTCTTGGACTGCTATGATTACTGGTTTTGTTCATTGCGGGAAGGCTAAAGAGGCTATT
AGACTTTTCGTAGAAATGGAAGAGACGGGGTTGAGGGCGAATGAGGTGACTGTAGTGGCC
GTTCTTGCAGCTTGTGCTGATTTGGGTGCACTTGAATTGGGTAGGAGGATTCATGAGTAT
TCAAATAAGAGCGGGTTCAGGAGAAACGTTCACATTTGTAACACTCTGATTGACATGTAC
ATTAAGTGTGGCTGCTTAGAGGCTGCAAAAGCTGTTTTCGATGAAATGAAGGAACGAACA
ATTGTATCATGGTCAACCATGATCCAGGGTTTAGCTATCCATGGGCACGGGGATGAAGCC
TTAGAACTCTTCAACGAGATGATCAAAATGGGAATGATGCCTAATGAGATCACGTTTCTT
GGAATCTTGCATGCATGCAGCCATATGGGGTTGATCAACAAGGGGCGCGAACTTTTTACT
AGCATGAGTAGAGACTATAACATTTCCCCTCAAATCGAACATTATGGTTGCATGGTTGAT
CTCTTGAGTCGAGCAGGACTTCTTCAAGACGCATATGAGCTCATTACAAGCATGCCTATA
AAACCAAATGCTGTTGTATGGGGTTCTTTTCTTGGTGGATGTAGAATCCAAAAGGATGTG
AAAATGGCTGAGGAAGCTATCAGGCAACTAGGTGTCCTAGACCCTCTTAACGATGGATAC
TACATTATCATGTCTAACATTTATGCAGAAGCTAAGCGTTGGGAAGATGCAGCAAGGGTG
AGGAAATTGATGAAAGATCGCGGAGTAAAGAAAACTCCAGGTTGGAGTTCAATTACTATA
GCAGGAACAACGCACGAATTTGTGGCTGGAGATGATAACCATCCTCAGGCTGAGCAGATC
TTTAAGAGATGGGATGAACTGCTAGAACAAATGAAGTCCAAAGGATATGTACCAAATACA
TCAGTGGTTCTACTTGACATAGAAGAGAATGAGAAAGAAAAATATGTGTATCGCCATAGT
GAAAAATTGGCTCTTGTTTTCGGTTTGATGAACATAAAGCCAGGAGAAACGATCAGAATA
ATGAAGAATCTTCGCGTTTGTGAAGATTGTCATGCTGCTTTCAAAGTAATATCAGAAATT
GTCAAGAGAGAGATAGTTGTGCGCGATAGGAATAGGTTTCATTGTTTTAAAGATGGATTT
TGTTCTTGTAAAGACTATTGGTAA

Peptide Sequence

PEP ID

PGSC0003DMP400038322
PEP Infomation

pacid=37432785 transcript=PGSC0003DMT400057017 locus=PGSC0003DMG400022163 ID=PGSC0003DMT400057017.v4.03 annot-version=v4.03
Sequence

MLHSVCLASPLHSPKLKDSINGTSEIPNTTLLHHFTSPFELKQAVAFLIKTNKPLSLLPL
SRVASICALSPDFPFAQQIFSSVEQQEVSIWNSCLRNLAEGSSLIDAIFLFHQMRSYNVS
LDCFTCSFVLKACVGLRDLLRGRVVHGYVEKLGFQSNLVLLNALLHLYATCGAMADANLL
FDKMPQRDVVSWNIMITQLAKKGDVDGAFDLFEKMPERNLRSWTAMITGFVHCGKAKEAI
RLFVEMEETGLRANEVTVVAVLAACADLGALELGRRIHEYSNKSGFRRNVHICNTLIDMY
IKCGCLEAAKAVFDEMKERTIVSWSTMIQGLAIHGHGDEALELFNEMIKMGMMPNEITFL
GILHACSHMGLINKGRELFTSMSRDYNISPQIEHYGCMVDLLSRAGLLQDAYELITSMPI
KPNAVVWGSFLGGCRIQKDVKMAEEAIRQLGVLDPLNDGYYIIMSNIYAEAKRWEDAARV
RKLMKDRGVKKTPGWSSITIAGTTHEFVAGDDNHPQAEQIFKRWDELLEQMKSKGYVPNT
SVVLLDIEENEKEKYVYRHSEKLALVFGLMNIKPGETIRIMKNLRVCEDCHAAFKVISEI
VKREIVVRDRNRFHCFKDGFCSCKDYW*

Transcript Sequence

Transcript ID

PGSC0003DMT400057017
Transcript Infomation

pacid=37432785 locus=PGSC0003DMG400022163 ID=PGSC0003DMT400057017.v4.03 annot-version=v4.03
Sequence

ATGCTGCATTCTGTTTGCTTGGCATCTCCACTTCACTCTCCAAAACTCAAAGACTCCATT
AATGGCACTTCAGAAATACCCAATACTACCCTTCTCCACCATTTCACTTCTCCATTCGAG
CTCAAACAAGCTGTTGCGTTTCTCATCAAAACCAATAAACCTCTTTCACTACTCCCACTT
TCTCGGGTAGCTTCCATTTGCGCACTTTCTCCCGATTTCCCCTTTGCTCAACAGATTTTC
AGCTCTGTTGAACAGCAAGAAGTTTCTATATGGAATAGCTGTTTGAGAAATCTTGCTGAA
GGTAGTTCTTTAATTGATGCAATTTTCTTGTTTCATCAAATGCGTAGTTACAATGTGAGT
CTTGACTGTTTCACTTGCTCATTTGTTCTTAAGGCTTGTGTTGGGTTACGGGATCTTTTA
CGTGGGAGAGTTGTTCATGGGTATGTAGAGAAACTTGGGTTTCAATCGAATTTAGTTTTG
TTAAATGCACTTCTTCATTTGTATGCTACTTGTGGAGCAATGGCTGATGCGAACCTTCTG
TTCGATAAAATGCCTCAACGAGATGTTGTGTCCTGGAACATAATGATTACCCAATTAGCG
AAAAAGGGTGATGTTGATGGGGCGTTTGACTTGTTTGAGAAAATGCCTGAGAGAAATTTA
AGGTCTTGGACTGCTATGATTACTGGTTTTGTTCATTGCGGGAAGGCTAAAGAGGCTATT
AGACTTTTCGTAGAAATGGAAGAGACGGGGTTGAGGGCGAATGAGGTGACTGTAGTGGCC
GTTCTTGCAGCTTGTGCTGATTTGGGTGCACTTGAATTGGGTAGGAGGATTCATGAGTAT
TCAAATAAGAGCGGGTTCAGGAGAAACGTTCACATTTGTAACACTCTGATTGACATGTAC
ATTAAGTGTGGCTGCTTAGAGGCTGCAAAAGCTGTTTTCGATGAAATGAAGGAACGAACA
ATTGTATCATGGTCAACCATGATCCAGGGTTTAGCTATCCATGGGCACGGGGATGAAGCC
TTAGAACTCTTCAACGAGATGATCAAAATGGGAATGATGCCTAATGAGATCACGTTTCTT
GGAATCTTGCATGCATGCAGCCATATGGGGTTGATCAACAAGGGGCGCGAACTTTTTACT
AGCATGAGTAGAGACTATAACATTTCCCCTCAAATCGAACATTATGGTTGCATGGTTGAT
CTCTTGAGTCGAGCAGGACTTCTTCAAGACGCATATGAGCTCATTACAAGCATGCCTATA
AAACCAAATGCTGTTGTATGGGGTTCTTTTCTTGGTGGATGTAGAATCCAAAAGGATGTG
AAAATGGCTGAGGAAGCTATCAGGCAACTAGGTGTCCTAGACCCTCTTAACGATGGATAC
TACATTATCATGTCTAACATTTATGCAGAAGCTAAGCGTTGGGAAGATGCAGCAAGGGTG
AGGAAATTGATGAAAGATCGCGGAGTAAAGAAAACTCCAGGTTGGAGTTCAATTACTATA
GCAGGAACAACGCACGAATTTGTGGCTGGAGATGATAACCATCCTCAGGCTGAGCAGATC
TTTAAGAGATGGGATGAACTGCTAGAACAAATGAAGTCCAAAGGATATGTACCAAATACA
TCAGTGGTTCTACTTGACATAGAAGAGAATGAGAAAGAAAAATATGTGTATCGCCATAGT
GAAAAATTGGCTCTTGTTTTCGGTTTGATGAACATAAAGCCAGGAGAAACGATCAGAATA
ATGAAGAATCTTCGCGTTTGTGAAGATTGTCATGCTGCTTTCAAAGTAATATCAGAAATT
GTCAAGAGAGAGATAGTTGTGCGCGATAGGAATAGGTTTCATTGTTTTAAAGATGGATTT
TGTTCTTGTAAAGACTATTGGTAA