Plant GARDEN
How To ▶︎

JA

EN

TOP > About the Species(Solanum tuberosum ) > genome data >Gene sequences

Search

By Species By Keywords Genes By Markers By Traits

Let’s Analyze!!

SNP Detection
(lang=JA only) Sequences Other Tools

Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400056952
CDS Infomation

pacid=37432794 polypeptide=PGSC0003DMP400038283 locus=PGSC0003DMG400022143 ID=PGSC0003DMT400056952.v4.03 annot-version=v4.03
Sequence

ATGGGTGGATTTGATGATCATGTTGCCATTATGGGAGATTGGATGCCTCCAAGTCCAAGT
CCAAGAACATTTTTCTCTTCACTGCTAGGTGATGATGTTGGGTCAAGATCATCTTTTGAA
GGCACCAATGAAACTAGTGGAAACCTAGCTTCTGGTCCTCAAGAACATGTTGGCAATTCA
GATAGAAATGATGGAGCACAAGCTGCAATCAGTGAACCACAACCGGTGAAATTTAGTGCA
CTGTCTGACCAGAAAATGAGCTCTCGCGGAGGAGGACTCTTGGAAAGAATAGCAGCTAGA
GCTGGATTTAATGCCCCGAAGCTGAACACGGAGAGCCTTAGACCTGCTGATCTGATGCAG
AATCAAGGAGTTCGCTCTCCTTATTTAACTATTCCTCCTGGTCTTAGTCCAACAACCCTG
CTAGAGTCTCCTGTTTTTCTCTCCAATTCACTGGTGCAACCATCCCCAACAACTGGAAAA
TTTCTATTTTCCTCAGGCATTGAGAATAGAAACTCGGCATTGATGATGGAGGATACAGAT
AAGAGGAAAGATAATGCTTTAGAGAGTATCAATTCATCGTCCTTTTCTTTCAAGCCAGTT
CCAGAGACTGCTCCATCTCTTTTTCCTGGCACGACCAGCAGATCTTGGTTGCAGGTGAAC
CCGTCCAATTTTTCTCAGCAAGGATTTCCAAACATTGAAGTTTCAGTTCATTCCCAGAAC
TCGCTTGTATCTCACCGTGTGGAAGCTACACAAAACCCGACTCAGAGTGGAACACTTCAG
CAATCATCTGATTTCCCTAGATTTTCTGCTGAGAAGGATGTCATGGGTAATAATGTTACC
CTAGAGTCTAGGACTTTTCAGACAGTTGGTAGTGCTGTGGACCATTCTCCACCTCTCGAT
GAACCGCAAGATGAGGACATTGATCAAAGAGGAGGTGGAGATCCAAATGTTGCTGGTGCC
CCAGCTGAAGATGGTTATAATTGGCGAAAATATGGGCAGAAACAAGTTAAGGGGAGCGAG
TACCCCCGAAGTTATTATAAGTGCACACATCCAAACTGTCCAGTCAAGAAGAAAGTGGAG
CGATCTCCAGAGGGTCATATTACTGAGATTATATACAAGGGAGCCCACAATCACCCAAAA
CCCCCACCTAACCGTAGATCAGCCCTTGGATCCACAAATTCACTTGGTGACCTACAGCTG
GACGGTGCAGAACAAGGTGCAAGTGGTGTTAATGGTGATCTGGGTCAGGCAAACTTCCAG
AAAGCACCTGGTGCTGGAGGAGGTTTTGATTGGAGGAACAACAATCTTGATGCAACATCA
TCAGCGAACTTGGGCTCCGAGTACTGCAACAGATCTGCCCCTTTCTCTGCTCAGAATAAC
ACTCGGTTGGAATCAGGTGATGCAGTAGATGTGTCGTCAACTTTTTCAAATGATGAAGAT
GAAGATGATCGTGGAACTCATGGCAGCGTATCACAAGGTTATGATGGTGAAGGAGATGAG
TCCGAGTCTAAAAGAAGGAAGCTCGAGACCTACTCTGCAGATATGACTGGTGCCACTAGA
GCTATCAGGGAGCCAAGAGTTGTGGTTCAAACTACAAGCGAAGTGGACATCCTTGATGAT
GGATATCGCTGGCGTAAGTATGGGCAAAAGGTTGTTAAAGGGAATCCAAATCCGAGGAGT
TACTACAAGTGCACAAGTGCTGGCTGCAATGTCAGGAAGCATGTTGAGAGGGCCTCGCAT
GACCTGAAGTCAGTGATTACCACCTATGAAGGGAAGCACAACCACGACGTTCCTGCAGCT
CGCAACAGTAGCCATGTTAATTCAGGGGCCTCCAACACTCATCCAACTTCAGTTACTGGG
CCTGCTCAAAACCATTTACATAGGCCTGAGGCTGCTCAACTTCAGAATGCTATGGCGCAG
TTTGACAGGCAACCTTCATTGGGCTCATTTGGTCTGTCAAGGAGGCCCCAGCTTGGACCT
AACCCAGGATTTAGCTATGGAATGAACCAGCAAGGCGGACTATCCAGTCTAGCAATGGCC
GGATTTCATCCTAATCAAAACAAGCCAGGGGAGTTTCATATGCATCCATACCTAGGACAG
CCGCGACCCATGCATGATATGGGATTTATGTTCCCAAAGGAAGAACCAAAGGTGGAACCT
ATGTCGGATCCTGGATTGAACCTCGCCAATGGCTCAGCAGTTTATCAGCAATTTATGAAC
AGGTTGCCGCTTGGACCTCAGATGTAA

Peptide Sequence

PEP ID

PGSC0003DMP400038283
PEP Infomation

pacid=37432794 transcript=PGSC0003DMT400056952 locus=PGSC0003DMG400022143 ID=PGSC0003DMT400056952.v4.03 annot-version=v4.03
Sequence

MGGFDDHVAIMGDWMPPSPSPRTFFSSLLGDDVGSRSSFEGTNETSGNLASGPQEHVGNS
DRNDGAQAAISEPQPVKFSALSDQKMSSRGGGLLERIAARAGFNAPKLNTESLRPADLMQ
NQGVRSPYLTIPPGLSPTTLLESPVFLSNSLVQPSPTTGKFLFSSGIENRNSALMMEDTD
KRKDNALESINSSSFSFKPVPETAPSLFPGTTSRSWLQVNPSNFSQQGFPNIEVSVHSQN
SLVSHRVEATQNPTQSGTLQQSSDFPRFSAEKDVMGNNVTLESRTFQTVGSAVDHSPPLD
EPQDEDIDQRGGGDPNVAGAPAEDGYNWRKYGQKQVKGSEYPRSYYKCTHPNCPVKKKVE
RSPEGHITEIIYKGAHNHPKPPPNRRSALGSTNSLGDLQLDGAEQGASGVNGDLGQANFQ
KAPGAGGGFDWRNNNLDATSSANLGSEYCNRSAPFSAQNNTRLESGDAVDVSSTFSNDED
EDDRGTHGSVSQGYDGEGDESESKRRKLETYSADMTGATRAIREPRVVVQTTSEVDILDD
GYRWRKYGQKVVKGNPNPRSYYKCTSAGCNVRKHVERASHDLKSVITTYEGKHNHDVPAA
RNSSHVNSGASNTHPTSVTGPAQNHLHRPEAAQLQNAMAQFDRQPSLGSFGLSRRPQLGP
NPGFSYGMNQQGGLSSLAMAGFHPNQNKPGEFHMHPYLGQPRPMHDMGFMFPKEEPKVEP
MSDPGLNLANGSAVYQQFMNRLPLGPQM*

Transcript Sequence

Transcript ID

PGSC0003DMT400056952
Transcript Infomation

pacid=37432794 locus=PGSC0003DMG400022143 ID=PGSC0003DMT400056952.v4.03 annot-version=v4.03
Sequence

ATGGGTGGATTTGATGATCATGTTGCCATTATGGGAGATTGGATGCCTCCAAGTCCAAGT
CCAAGAACATTTTTCTCTTCACTGCTAGGTGATGATGTTGGGTCAAGATCATCTTTTGAA
GGCACCAATGAAACTAGTGGAAACCTAGCTTCTGGTCCTCAAGAACATGTTGGCAATTCA
GATAGAAATGATGGAGCACAAGCTGCAATCAGTGAACCACAACCGGTGAAATTTAGTGCA
CTGTCTGACCAGAAAATGAGCTCTCGCGGAGGAGGACTCTTGGAAAGAATAGCAGCTAGA
GCTGGATTTAATGCCCCGAAGCTGAACACGGAGAGCCTTAGACCTGCTGATCTGATGCAG
AATCAAGGAGTTCGCTCTCCTTATTTAACTATTCCTCCTGGTCTTAGTCCAACAACCCTG
CTAGAGTCTCCTGTTTTTCTCTCCAATTCACTGGTGCAACCATCCCCAACAACTGGAAAA
TTTCTATTTTCCTCAGGCATTGAGAATAGAAACTCGGCATTGATGATGGAGGATACAGAT
AAGAGGAAAGATAATGCTTTAGAGAGTATCAATTCATCGTCCTTTTCTTTCAAGCCAGTT
CCAGAGACTGCTCCATCTCTTTTTCCTGGCACGACCAGCAGATCTTGGTTGCAGGTGAAC
CCGTCCAATTTTTCTCAGCAAGGATTTCCAAACATTGAAGTTTCAGTTCATTCCCAGAAC
TCGCTTGTATCTCACCGTGTGGAAGCTACACAAAACCCGACTCAGAGTGGAACACTTCAG
CAATCATCTGATTTCCCTAGATTTTCTGCTGAGAAGGATGTCATGGGTAATAATGTTACC
CTAGAGTCTAGGACTTTTCAGACAGTTGGTAGTGCTGTGGACCATTCTCCACCTCTCGAT
GAACCGCAAGATGAGGACATTGATCAAAGAGGAGGTGGAGATCCAAATGTTGCTGGTGCC
CCAGCTGAAGATGGTTATAATTGGCGAAAATATGGGCAGAAACAAGTTAAGGGGAGCGAG
TACCCCCGAAGTTATTATAAGTGCACACATCCAAACTGTCCAGTCAAGAAGAAAGTGGAG
CGATCTCCAGAGGGTCATATTACTGAGATTATATACAAGGGAGCCCACAATCACCCAAAA
CCCCCACCTAACCGTAGATCAGCCCTTGGATCCACAAATTCACTTGGTGACCTACAGCTG
GACGGTGCAGAACAAGGTGCAAGTGGTGTTAATGGTGATCTGGGTCAGGCAAACTTCCAG
AAAGCACCTGGTGCTGGAGGAGGTTTTGATTGGAGGAACAACAATCTTGATGCAACATCA
TCAGCGAACTTGGGCTCCGAGTACTGCAACAGATCTGCCCCTTTCTCTGCTCAGAATAAC
ACTCGGTTGGAATCAGGTGATGCAGTAGATGTGTCGTCAACTTTTTCAAATGATGAAGAT
GAAGATGATCGTGGAACTCATGGCAGCGTATCACAAGGTTATGATGGTGAAGGAGATGAG
TCCGAGTCTAAAAGAAGGAAGCTCGAGACCTACTCTGCAGATATGACTGGTGCCACTAGA
GCTATCAGGGAGCCAAGAGTTGTGGTTCAAACTACAAGCGAAGTGGACATCCTTGATGAT
GGATATCGCTGGCGTAAGTATGGGCAAAAGGTTGTTAAAGGGAATCCAAATCCGAGGAGT
TACTACAAGTGCACAAGTGCTGGCTGCAATGTCAGGAAGCATGTTGAGAGGGCCTCGCAT
GACCTGAAGTCAGTGATTACCACCTATGAAGGGAAGCACAACCACGACGTTCCTGCAGCT
CGCAACAGTAGCCATGTTAATTCAGGGGCCTCCAACACTCATCCAACTTCAGTTACTGGG
CCTGCTCAAAACCATTTACATAGGCCTGAGGCTGCTCAACTTCAGAATGCTATGGCGCAG
TTTGACAGGCAACCTTCATTGGGCTCATTTGGTCTGTCAAGGAGGCCCCAGCTTGGACCT
AACCCAGGATTTAGCTATGGAATGAACCAGCAAGGCGGACTATCCAGTCTAGCAATGGCC
GGATTTCATCCTAATCAAAACAAGCCAGGGGAGTTTCATATGCATCCATACCTAGGACAG
CCGCGACCCATGCATGATATGGGATTTATGTTCCCAAAGGAAGAACCAAAGGTGGAACCT
ATGTCGGATCCTGGATTGAACCTCGCCAATGGCTCAGCAGTTTATCAGCAATTTATGAAC
AGGTTGCCGCTTGGACCTCAGATGTAA