Plant GARDEN
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TOP > About the Species(Solanum tuberosum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400056929
CDS Infomation

pacid=37434762 polypeptide=PGSC0003DMP400038268 locus=PGSC0003DMG400022137 ID=PGSC0003DMT400056929.v4.03 annot-version=v4.03
Sequence

ATGGGAATTTGTTACTCTTCAAGTAAAAGCAAGAGCGATGATGGGTTGTGGGATGGTAAG
AATGACAGCAGAAGGTTTGATTCCAAGTTGAAGAAGAACAGTTACAGTGGCGATTTCAGC
TCATTTTTGAGCAAGTTAAGTGGTGTTGGTGGAGGAGGGGGTGAGGACAAGGGGCTGCAT
CATATTCCCGGAAGGATTTTGGGGAATGGAGCCTCCTCCCGTGCTTGCCTACACACTCAG
CAAGGGAAAAAAGGAACGAATCAAGATGCCATGATCGTTTGGGAGAATTTTTGCTCGCGA
AGTGATACAATATTTTGCGGAGTATTTGATGGACACGGTCCCTATGGCCACATGGTGGCA
AGGAAAGTTCGAGATACTCTTCCGTTTCTCCTGTGTTCAGAGTGGCAAGTTAAATCCAGT
GGTGATCAAAGTAATACTTCTGAGAACGGAAATACCAATGGAGGTTCACATCTTGATGAT
GTCTTGGATGATGATTTGATTGAAGCTATGGAAGCTGAGAGCAACGAAAAGTTCCCAGAA
ATACATCTTCCCCTTAAAAGATCAATGTTAAAAGCTTTCCGGTCGATGGATAAAGAACTC
AAGTTGCACCCTACTATTGATTGTTTCTGTAGTGGATCAACTGCTGTTTCCTTGGTGATG
CAGGGCCAGGATATAATAGTTGGTAATGTTGGTGACTCAAGAGCAGTATTGGCAACTAGA
GATAAAGACAACTATTTAATGGCTGTACAGTTGACAGTAGATTTGAAGCCTAATCTTCCA
AAAGAAGCTGCTAGAATACATAAATACAAAGGCAGGGTTTTTGCATTGCAAGATGAGCCA
GAGGTTGCACGTGTATGGTTGCCGAACAGCGACTCTCCTGGCTTGGCAATGGCCAGAGCA
TTTGGTGATTTTTGTCTCAAAGATTTTGGGTTAATTTCTGTCCCTGATGTGTATTACCAC
CGCATTACTGATAGGAATGAATTTGTTGTTCTAGCAACTGATGGGGTTTGGGATGTCCTT
TCTAATAAGGAAGCCGTGGATATTGTGGCCTCAGCCCCAAGTCGCGCTACAGCTGCCCGA
GCTCTTGTTGACTGCGCGACAAGAGCTTGGAGGCTGAAGTACCCGACATCAAAGACTGAT
GACTGTGCTGTAGTATGCCTTTTCCTGGACCGTGTACCTGCACCTGATTCTGTAGTCACA
GCGACGCAACATGATTTGACAAAGGCTCCTGAAGTGGAAATTAAAACAATTATTACTGAT
GGCAACCTTGAAAATGCAGATAGGAATGCTTCTCATATTGCAGTTCGTGAACATTCAGTT
ACTACAAAAGATGCCAGTGAGATAGTCCCTGTTGACGAGTCAATAGAAGAACAGCTAGCG
GATAAGGGTCTTGGACATTCTACGAGAAGCCTAGCCGAGTGCCTTTCAACTGCAGAAGAT
CAGGAATGGTCAGCCCTCGAGGGAGTTACCAGGGTTAATAGCCTTCTTAGTCTACCTAGA
TTCATGTCTGGTGACAAAAAGTCAGCCAGTCGGAGGAAATGGTTGTAA

Peptide Sequence

PEP ID

PGSC0003DMP400038268
PEP Infomation

pacid=37434762 transcript=PGSC0003DMT400056929 locus=PGSC0003DMG400022137 ID=PGSC0003DMT400056929.v4.03 annot-version=v4.03
Sequence

MGICYSSSKSKSDDGLWDGKNDSRRFDSKLKKNSYSGDFSSFLSKLSGVGGGGGEDKGLH
HIPGRILGNGASSRACLHTQQGKKGTNQDAMIVWENFCSRSDTIFCGVFDGHGPYGHMVA
RKVRDTLPFLLCSEWQVKSSGDQSNTSENGNTNGGSHLDDVLDDDLIEAMEAESNEKFPE
IHLPLKRSMLKAFRSMDKELKLHPTIDCFCSGSTAVSLVMQGQDIIVGNVGDSRAVLATR
DKDNYLMAVQLTVDLKPNLPKEAARIHKYKGRVFALQDEPEVARVWLPNSDSPGLAMARA
FGDFCLKDFGLISVPDVYYHRITDRNEFVVLATDGVWDVLSNKEAVDIVASAPSRATAAR
ALVDCATRAWRLKYPTSKTDDCAVVCLFLDRVPAPDSVVTATQHDLTKAPEVEIKTIITD
GNLENADRNASHIAVREHSVTTKDASEIVPVDESIEEQLADKGLGHSTRSLAECLSTAED
QEWSALEGVTRVNSLLSLPRFMSGDKKSASRRKWL*

Transcript Sequence

Transcript ID

PGSC0003DMT400056929
Transcript Infomation

pacid=37434762 locus=PGSC0003DMG400022137 ID=PGSC0003DMT400056929.v4.03 annot-version=v4.03
Sequence

ATGGGAATTTGTTACTCTTCAAGTAAAAGCAAGAGCGATGATGGGTTGTGGGATGGTAAG
AATGACAGCAGAAGGTTTGATTCCAAGTTGAAGAAGAACAGTTACAGTGGCGATTTCAGC
TCATTTTTGAGCAAGTTAAGTGGTGTTGGTGGAGGAGGGGGTGAGGACAAGGGGCTGCAT
CATATTCCCGGAAGGATTTTGGGGAATGGAGCCTCCTCCCGTGCTTGCCTACACACTCAG
CAAGGGAAAAAAGGAACGAATCAAGATGCCATGATCGTTTGGGAGAATTTTTGCTCGCGA
AGTGATACAATATTTTGCGGAGTATTTGATGGACACGGTCCCTATGGCCACATGGTGGCA
AGGAAAGTTCGAGATACTCTTCCGTTTCTCCTGTGTTCAGAGTGGCAAGTTAAATCCAGT
GGTGATCAAAGTAATACTTCTGAGAACGGAAATACCAATGGAGGTTCACATCTTGATGAT
GTCTTGGATGATGATTTGATTGAAGCTATGGAAGCTGAGAGCAACGAAAAGTTCCCAGAA
ATACATCTTCCCCTTAAAAGATCAATGTTAAAAGCTTTCCGGTCGATGGATAAAGAACTC
AAGTTGCACCCTACTATTGATTGTTTCTGTAGTGGATCAACTGCTGTTTCCTTGGTGATG
CAGGGCCAGGATATAATAGTTGGTAATGTTGGTGACTCAAGAGCAGTATTGGCAACTAGA
GATAAAGACAACTATTTAATGGCTGTACAGTTGACAGTAGATTTGAAGCCTAATCTTCCA
AAAGAAGCTGCTAGAATACATAAATACAAAGGCAGGGTTTTTGCATTGCAAGATGAGCCA
GAGGTTGCACGTGTATGGTTGCCGAACAGCGACTCTCCTGGCTTGGCAATGGCCAGAGCA
TTTGGTGATTTTTGTCTCAAAGATTTTGGGTTAATTTCTGTCCCTGATGTGTATTACCAC
CGCATTACTGATAGGAATGAATTTGTTGTTCTAGCAACTGATGGGGTTTGGGATGTCCTT
TCTAATAAGGAAGCCGTGGATATTGTGGCCTCAGCCCCAAGTCGCGCTACAGCTGCCCGA
GCTCTTGTTGACTGCGCGACAAGAGCTTGGAGGCTGAAGTACCCGACATCAAAGACTGAT
GACTGTGCTGTAGTATGCCTTTTCCTGGACCGTGTACCTGCACCTGATTCTGTAGTCACA
GCGACGCAACATGATTTGACAAAGGCTCCTGAAGTGGAAATTAAAACAATTATTACTGAT
GGCAACCTTGAAAATGCAGATAGGAATGCTTCTCATATTGCAGTTCGTGAACATTCAGTT
ACTACAAAAGATGCCAGTGAGATAGTCCCTGTTGACGAGTCAATAGAAGAACAGCTAGCG
GATAAGGGTCTTGGACATTCTACGAGAAGCCTAGCCGAGTGCCTTTCAACTGCAGAAGAT
CAGGAATGGTCAGCCCTCGAGGGAGTTACCAGGGTTAATAGCCTTCTTAGTCTACCTAGA
TTCATGTCTGGTGACAAAAAGTCAGCCAGTCGGAGGAAATGGTTGTAA