Plant GARDEN
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TOP > About the Species(Solanum tuberosum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400056914
CDS Infomation

pacid=37432261 polypeptide=PGSC0003DMP400038261 locus=PGSC0003DMG401022133 ID=PGSC0003DMT400056914.v4.03 annot-version=v4.03
Sequence

ATGGCTGAAGAGTTCAAGTATTCTTGCAACACTGCGAGTGAAACCCTACAATGGATCCAT
GCAATCATCAACTTCATTGCACCTTATCGTTATTTCTTAGATGCTCATGTCGTCAACTTT
TTCAAGGATAGACTATGGGAACCTGTTGATAAAGAATGGATGGATTGTTTACGGAAGGAG
TCGGTTGGAAATCTTCTCCGGATTCCTTCTGGTGTGGTTCAGGATCACTGGCCTGGCTCA
CTGAAGGAGTTCATCCTTACTCTGAGGTCTCTTTCTCTTTCACGGGAACAGGCAGATTTT
CAGGAATTTTCAGGAATGCACATAGCTTCACTAAATAATGTTTTAGCTCAAGGGATGAAT
CATAAGAAAAAGCATGAAGTGGAAGCGCTTTCTGCTCTGGTCAGTTTAGTCGCAAAGCAA
GTTGGAGCCCGAACAGTTGTTGATGTTGGTGCTGGACAGGGTTATCTTGCACAAGTGCTT
GCTTTTGACTACCAGCTTTCTGTAATTGCGATTGATGCCTGTTCACATCATGGTAAGATT
ACTGATGCACGTGCGGAGCGAATAAGGAAACACTATGCAGCTAAGATGCGTAAAAACTGC
TCCGAACAGAGAGAGTTTAGTGTGCCAAAGACAGTTACATGCCGAGTGCTGTCTTCTGAT
ACACTGAGTGCCTTGAGTAACTCCCCAGTAGAGAATGATCATGCAGGGAATCAACATTTG
AGCCAAAAATGCTCAGTCTCTCAGCCATCTCGACTTGCTGAGGATATACTACCTTCTCGG
TCTTATAGTGATTCTACATTGGTTATTGCTGGACTTCATGCATGTGGAGACCTCTCAGTG
ACAATGTTGAGGTGGGTACCATATTTTATATTGTGCTCCTTTCTAAATCTCATGAGGTGG
TAA

Peptide Sequence

PEP ID

PGSC0003DMP400038261
PEP Infomation

pacid=37432261 transcript=PGSC0003DMT400056914 locus=PGSC0003DMG401022133 ID=PGSC0003DMT400056914.v4.03 annot-version=v4.03
Sequence

MAEEFKYSCNTASETLQWIHAIINFIAPYRYFLDAHVVNFFKDRLWEPVDKEWMDCLRKE
SVGNLLRIPSGVVQDHWPGSLKEFILTLRSLSLSREQADFQEFSGMHIASLNNVLAQGMN
HKKKHEVEALSALVSLVAKQVGARTVVDVGAGQGYLAQVLAFDYQLSVIAIDACSHHGKI
TDARAERIRKHYAAKMRKNCSEQREFSVPKTVTCRVLSSDTLSALSNSPVENDHAGNQHL
SQKCSVSQPSRLAEDILPSRSYSDSTLVIAGLHACGDLSVTMLRWVPYFILCSFLNLMRW
*

Transcript Sequence

Transcript ID

PGSC0003DMT400056914
Transcript Infomation

pacid=37432261 locus=PGSC0003DMG401022133 ID=PGSC0003DMT400056914.v4.03 annot-version=v4.03
Sequence

ATGGCTGAAGAGTTCAAGTATTCTTGCAACACTGCGAGTGAAACCCTACAATGGATCCAT
GCAATCATCAACTTCATTGCACCTTATCGTTATTTCTTAGATGCTCATGTCGTCAACTTT
TTCAAGGATAGACTATGGGAACCTGTTGATAAAGAATGGATGGATTGTTTACGGAAGGAG
TCGGTTGGAAATCTTCTCCGGATTCCTTCTGGTGTGGTTCAGGATCACTGGCCTGGCTCA
CTGAAGGAGTTCATCCTTACTCTGAGGTCTCTTTCTCTTTCACGGGAACAGGCAGATTTT
CAGGAATTTTCAGGAATGCACATAGCTTCACTAAATAATGTTTTAGCTCAAGGGATGAAT
CATAAGAAAAAGCATGAAGTGGAAGCGCTTTCTGCTCTGGTCAGTTTAGTCGCAAAGCAA
GTTGGAGCCCGAACAGTTGTTGATGTTGGTGCTGGACAGGGTTATCTTGCACAAGTGCTT
GCTTTTGACTACCAGCTTTCTGTAATTGCGATTGATGCCTGTTCACATCATGGTAAGATT
ACTGATGCACGTGCGGAGCGAATAAGGAAACACTATGCAGCTAAGATGCGTAAAAACTGC
TCCGAACAGAGAGAGTTTAGTGTGCCAAAGACAGTTACATGCCGAGTGCTGTCTTCTGAT
ACACTGAGTGCCTTGAGTAACTCCCCAGTAGAGAATGATCATGCAGGGAATCAACATTTG
AGCCAAAAATGCTCAGTCTCTCAGCCATCTCGACTTGCTGAGGATATACTACCTTCTCGG
TCTTATAGTGATTCTACATTGGTTATTGCTGGACTTCATGCATGTGGAGACCTCTCAGTG
ACAATGTTGAGGTGGGTACCATATTTTATATTGTGCTCCTTTCTAAATCTCATGAGGTGG
TAA