Plant GARDEN
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TOP > About the Species(Solanum tuberosum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400056889
CDS Infomation

pacid=37432374 polypeptide=PGSC0003DMP400038241 locus=PGSC0003DMG400022122 ID=PGSC0003DMT400056889.v4.03 annot-version=v4.03
Sequence

ATGGCCTCATCAGCTACCATCAACAAGATCGAAAGAGCTCACCAGATGTACAGGGAAGGT
AGATATGCCGAAGCTCTGGGTTTTTATACGGATGCTCTTTCTTTGGCTAAAACAAAGTCC
CAAAAGATCGCTCTCCACAGCAATCGTGCTGCTTGTTTCCTCAAACTTCACGATTTCAAA
AAGGCAGCAGATGAATGTACATTGGTGCTTGAACTTGATCAAAAACACACAGGCGCGCTG
ATGTTGCGCGCTCAAACCTTAGTCACCCTCAAGGAGTACCATTCAGCACTTTTCGATGTC
AACAGGTTAATTGAGTTGAATCCATCATCAGAAGTGTATCAAAACCTCCATGCCCGTCTG
AAGACCCAATTGTCACTTGCTCCAATACCTGAAGATGAAGCAGAGCTTGACGAAGATGAT
GACTTAAAGGTAGATTGGGAAGAACAATGTACAAATAGAGAAACCAATGAAGTTGATGTA
GGAGAAGACAAAAGAGATGTTGTGGAAGTAACCACAATAAAAGCCGAGTCTGGAAGTGTC
AAACAGACAACTGAAGTCAGTGATGTTCCAAAAATGGAATCGTCTGAACAACAGTCGTCT
AGCTGGGAAGCAATCCCACAGCCAAAAGGACATTCACGGCTTGACTATTCTAGATGGGAT
AGGGTTGAAGATGAGTCTAGTGAAGATGACGATGATGATGATGATGACGATGATTCTCAA
CCTCAGTATAGATTCCGTGTCAAAACTATTGGTGTGCGAGCTGTTAAGTAA

Peptide Sequence

PEP ID

PGSC0003DMP400038241
PEP Infomation

pacid=37432374 transcript=PGSC0003DMT400056889 locus=PGSC0003DMG400022122 ID=PGSC0003DMT400056889.v4.03 annot-version=v4.03
Sequence

MASSATINKIERAHQMYREGRYAEALGFYTDALSLAKTKSQKIALHSNRAACFLKLHDFK
KAADECTLVLELDQKHTGALMLRAQTLVTLKEYHSALFDVNRLIELNPSSEVYQNLHARL
KTQLSLAPIPEDEAELDEDDDLKVDWEEQCTNRETNEVDVGEDKRDVVEVTTIKAESGSV
KQTTEVSDVPKMESSEQQSSSWEAIPQPKGHSRLDYSRWDRVEDESSEDDDDDDDDDDSQ
PQYRFRVKTIGVRAVK*

Transcript Sequence

Transcript ID

PGSC0003DMT400056889
Transcript Infomation

pacid=37432374 locus=PGSC0003DMG400022122 ID=PGSC0003DMT400056889.v4.03 annot-version=v4.03
Sequence

ATGGCCTCATCAGCTACCATCAACAAGATCGAAAGAGCTCACCAGATGTACAGGGAAGGT
AGATATGCCGAAGCTCTGGGTTTTTATACGGATGCTCTTTCTTTGGCTAAAACAAAGTCC
CAAAAGATCGCTCTCCACAGCAATCGTGCTGCTTGTTTCCTCAAACTTCACGATTTCAAA
AAGGCAGCAGATGAATGTACATTGGTGCTTGAACTTGATCAAAAACACACAGGCGCGCTG
ATGTTGCGCGCTCAAACCTTAGTCACCCTCAAGGAGTACCATTCAGCACTTTTCGATGTC
AACAGGTTAATTGAGTTGAATCCATCATCAGAAGTGTATCAAAACCTCCATGCCCGTCTG
AAGACCCAATTGTCACTTGCTCCAATACCTGAAGATGAAGCAGAGCTTGACGAAGATGAT
GACTTAAAGGTAGATTGGGAAGAACAATGTACAAATAGAGAAACCAATGAAGTTGATGTA
GGAGAAGACAAAAGAGATGTTGTGGAAGTAACCACAATAAAAGCCGAGTCTGGAAGTGTC
AAACAGACAACTGAAGTCAGTGATGTTCCAAAAATGGAATCGTCTGAACAACAGTCGTCT
AGCTGGGAAGCAATCCCACAGCCAAAAGGACATTCACGGCTTGACTATTCTAGATGGGAT
AGGGTTGAAGATGAGTCTAGTGAAGATGACGATGATGATGATGATGACGATGATTCTCAA
CCTCAGTATAGATTCCGTGTCAAAACTATTGGTGTGCGAGCTGTTAAGTAA