Plant GARDEN
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TOP > About the Species(Solanum tuberosum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400056814
CDS Infomation

pacid=37434588 polypeptide=PGSC0003DMP400038197 locus=PGSC0003DMG400022096 ID=PGSC0003DMT400056814.v4.03 annot-version=v4.03
Sequence

ATGGCTCAAGAGGCGCGGCTCAACCTCCGAATGCAAAGGGAGCTTAAGCTTCTTCTCACC
GATCCACCTCCTGGCGCCTCCTTTCCTTCTCTTACTTCTTCCTCCTCTCTTTCCTCCATT
CATGCCTTAATTGAAGGCCCTGAAGGAACTGTGTATGCTAAAGGACACTTTAAACTCAAA
GTTCAGATACCTGAAAGGTACCCCTTTCAGCCTCCCATTGTCACTTTCCTAACGCCCATT
TATCATCCAAATATTGATAATGGTGGCCGTATTTGCTTGGATATTCTCAATCTTCCTCCA
AAGGGAGCATGGCAGCCATCTTTGAATATTTCAACTGTCTTAACAAGTATAGGTTTGTTA
CTAAGTGAGCCTAATCCTGATGATGGGTTAATGCATGACGCGAGCACGGAGTACAAATAC
AATAGACAAGCATTTGACCACAAGGCAAGATCAATGACTCAAAAGTACGCCACGTCTGGA
GCAAGTGATTTTGGGGGTCATGACCAAGAAATCCAAACTCTTACAAATGCAAGAGAAGGA
ATTGTTGAAGTCAAAGAATTAAATATACCAAAATCTGAGGTCCCTGATCATTTTGTGAAC
CAGAAGGGATTACGTGGACTCAGCAGAAAGTTGTCACTAGACTCTGCTGGACGTGCACAA
AGGCATAATGGTGAGACTGTGAGTGAAGTGCCTATTGATCATATCTTAACTAAGCAGATG
GAAGTTAGCAAACAAGGTATGGAAGAATTTCCCATCGAGTGTGACTTGAATCAGGATGAA
GTACAACAGAGAACCAAGAAACTATCTTCAGAAATTGTGAGTCCATCTAAAGTTAGAAAT
GGTGAGAAGAAGAACTATATGGCAAAAACTAAATGTTCTGCCAGTTTGGAACCCCAAAGT
ATTTTTCTGAATTATGCAGATATACAGGCCTTGCCACAGGCTGTAAGCAATTCAGGGAAG
ACTGCCAATCCACATAATAGTGAGATGAGAAATGTCAGCATAAATAAGAGTACAAATAAG
CTGTTGCTTAAGTCAACCGATTTCACCCAAAAACACGAGGATCTTGAGAAGTTGCAGGTC
AAGCCTCAGCTGTCAGTCCAACTTCAGTCCACTGCATCATGTCAAACTCTTTTGTTGTCA
GGGACCCCTGGTCATAACAATAAGCAACCTCATAAAAAGGCTTCTGATCAAAATGGAAAT
GGTTTCTTCACGAGGCATAAGAAGCTGGGTTTAACTGGCAGGAGACATCCTTTTGACACA
TCCAGTTCATCTCAATGTCATCAGAAGTGTGATAAAGAGAATTTAGCTCCATCTCAAAAC
CTACCTGCTTCAGAATCTGATGCATGCACTGATTCAGCGTCCAGTTTATTATTTCCTTCA
CAAACTGGTGATACTTGTGATGTGTGGACTAGGAAGTCATCTAATCATTGTGGGACTTTG
AAGAATCTGCCACTACAAGCTATAGAGCACTCTGGAGAGGGTAAGGACAATATCTTTCAG
TTGACCTCTCAATCTGGACAACATTCCACAGCCCTTTCATGTGAGAACTTATGTGATCAT
AAGCAGCCCAACCAAGACGAGAATATATACTATAACAAGAACATGAAGCAACAGGAAAAA
GAATCACCACAATGTGAAGCTGTGATTGTATTGGACAGTGAGGATAGTGAAGATGAAAGG
AGTGTTCATAAAAGGTCCAAGTTGTCGCTAGCGCGAAGACATGTGTCAGGTAAGCGAAAG
GCTTAA

Peptide Sequence

PEP ID

PGSC0003DMP400038197
PEP Infomation

pacid=37434588 transcript=PGSC0003DMT400056814 locus=PGSC0003DMG400022096 ID=PGSC0003DMT400056814.v4.03 annot-version=v4.03
Sequence

MAQEARLNLRMQRELKLLLTDPPPGASFPSLTSSSSLSSIHALIEGPEGTVYAKGHFKLK
VQIPERYPFQPPIVTFLTPIYHPNIDNGGRICLDILNLPPKGAWQPSLNISTVLTSIGLL
LSEPNPDDGLMHDASTEYKYNRQAFDHKARSMTQKYATSGASDFGGHDQEIQTLTNAREG
IVEVKELNIPKSEVPDHFVNQKGLRGLSRKLSLDSAGRAQRHNGETVSEVPIDHILTKQM
EVSKQGMEEFPIECDLNQDEVQQRTKKLSSEIVSPSKVRNGEKKNYMAKTKCSASLEPQS
IFLNYADIQALPQAVSNSGKTANPHNSEMRNVSINKSTNKLLLKSTDFTQKHEDLEKLQV
KPQLSVQLQSTASCQTLLLSGTPGHNNKQPHKKASDQNGNGFFTRHKKLGLTGRRHPFDT
SSSSQCHQKCDKENLAPSQNLPASESDACTDSASSLLFPSQTGDTCDVWTRKSSNHCGTL
KNLPLQAIEHSGEGKDNIFQLTSQSGQHSTALSCENLCDHKQPNQDENIYYNKNMKQQEK
ESPQCEAVIVLDSEDSEDERSVHKRSKLSLARRHVSGKRKA*

Transcript Sequence

Transcript ID

PGSC0003DMT400056814
Transcript Infomation

pacid=37434588 locus=PGSC0003DMG400022096 ID=PGSC0003DMT400056814.v4.03 annot-version=v4.03
Sequence

ATGGCTCAAGAGGCGCGGCTCAACCTCCGAATGCAAAGGGAGCTTAAGCTTCTTCTCACC
GATCCACCTCCTGGCGCCTCCTTTCCTTCTCTTACTTCTTCCTCCTCTCTTTCCTCCATT
CATGCCTTAATTGAAGGCCCTGAAGGAACTGTGTATGCTAAAGGACACTTTAAACTCAAA
GTTCAGATACCTGAAAGGTACCCCTTTCAGCCTCCCATTGTCACTTTCCTAACGCCCATT
TATCATCCAAATATTGATAATGGTGGCCGTATTTGCTTGGATATTCTCAATCTTCCTCCA
AAGGGAGCATGGCAGCCATCTTTGAATATTTCAACTGTCTTAACAAGTATAGGTTTGTTA
CTAAGTGAGCCTAATCCTGATGATGGGTTAATGCATGACGCGAGCACGGAGTACAAATAC
AATAGACAAGCATTTGACCACAAGGCAAGATCAATGACTCAAAAGTACGCCACGTCTGGA
GCAAGTGATTTTGGGGGTCATGACCAAGAAATCCAAACTCTTACAAATGCAAGAGAAGGA
ATTGTTGAAGTCAAAGAATTAAATATACCAAAATCTGAGGTCCCTGATCATTTTGTGAAC
CAGAAGGGATTACGTGGACTCAGCAGAAAGTTGTCACTAGACTCTGCTGGACGTGCACAA
AGGCATAATGGTGAGACTGTGAGTGAAGTGCCTATTGATCATATCTTAACTAAGCAGATG
GAAGTTAGCAAACAAGGTATGGAAGAATTTCCCATCGAGTGTGACTTGAATCAGGATGAA
GTACAACAGAGAACCAAGAAACTATCTTCAGAAATTGTGAGTCCATCTAAAGTTAGAAAT
GGTGAGAAGAAGAACTATATGGCAAAAACTAAATGTTCTGCCAGTTTGGAACCCCAAAGT
ATTTTTCTGAATTATGCAGATATACAGGCCTTGCCACAGGCTGTAAGCAATTCAGGGAAG
ACTGCCAATCCACATAATAGTGAGATGAGAAATGTCAGCATAAATAAGAGTACAAATAAG
CTGTTGCTTAAGTCAACCGATTTCACCCAAAAACACGAGGATCTTGAGAAGTTGCAGGTC
AAGCCTCAGCTGTCAGTCCAACTTCAGTCCACTGCATCATGTCAAACTCTTTTGTTGTCA
GGGACCCCTGGTCATAACAATAAGCAACCTCATAAAAAGGCTTCTGATCAAAATGGAAAT
GGTTTCTTCACGAGGCATAAGAAGCTGGGTTTAACTGGCAGGAGACATCCTTTTGACACA
TCCAGTTCATCTCAATGTCATCAGAAGTGTGATAAAGAGAATTTAGCTCCATCTCAAAAC
CTACCTGCTTCAGAATCTGATGCATGCACTGATTCAGCGTCCAGTTTATTATTTCCTTCA
CAAACTGGTGATACTTGTGATGTGTGGACTAGGAAGTCATCTAATCATTGTGGGACTTTG
AAGAATCTGCCACTACAAGCTATAGAGCACTCTGGAGAGGGTAAGGACAATATCTTTCAG
TTGACCTCTCAATCTGGACAACATTCCACAGCCCTTTCATGTGAGAACTTATGTGATCAT
AAGCAGCCCAACCAAGACGAGAATATATACTATAACAAGAACATGAAGCAACAGGAAAAA
GAATCACCACAATGTGAAGCTGTGATTGTATTGGACAGTGAGGATAGTGAAGATGAAAGG
AGTGTTCATAAAAGGTCCAAGTTGTCGCTAGCGCGAAGACATGTGTCAGGTAAGCGAAAG
GCTTAA