Plant GARDEN
How To ▶︎

JA

EN

TOP > About the Species(Solanum tuberosum ) > genome data >Gene sequences

Search

By Species By Keywords Genes By Markers By Traits

Let’s Analyze!!

SNP Detection
(lang=JA only) Sequences Other Tools

Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400056778
CDS Infomation

pacid=37455136 polypeptide=PGSC0003DMP400038173 locus=PGSC0003DMG400022079 ID=PGSC0003DMT400056778.v4.03 annot-version=v4.03
Sequence

ATGTCTATGGCTTCCAAACTACAACTTCATCAGAACGTTGAGGTGAGGAGTATTGAAAGT
GGATTCCTGGGTTCATGGCACTTAGCTACTATCATTGCTTTTGATAATTTTGTTCCACAA
GTTCAATACCATCACCTTCTCTCTGATGACGATGCTTCTATCAACTTGATTGAATCTGTT
AAGCTTTCTCCAATTAGGCCTTTCCCACCTCCACTTCAATTTCACACATCCCTTCTATCT
TATGGACAATGTGTTGATTTGTTTTATCAAGATGCTTGGTGGGAAGGAGTTATATTTGAT
CATCAAAATGGTGCCCTAAACCGCAGAGTTTTCTTTCCAGATATGGGTGATGAAATCAAT
GCTCAACTCCACAATCTACGTATAACTCAAGATTGGGATGAGGTTTCACAACAATGGAAG
CCTCGTGGTAGCTGGATGTTTCTTCAAATTATTCAGGAGATTGAGAATCTCCACCCCCTT
TTCGTCTCACTCAAACAAATTTGGTATCAAATCCGGGAGAAGAATGGCTACCAATACCTC
AAGGAATGGACATCTACTTCGGCTGATAGCTGGAGGAACTTGATCAAGGAAGTTGTGCAT
GAAAACGCCATGTTAACCGTCAAGCATATTTTTTGTGAGTCCAACACTTCACCAGACTTT
CTAGAGGGAGGTCCATTGCTAGAATTTTCACAACCCACTATTCAGGTTGAAACATATTTT
GATAACTCAGCCATTGTACCTTTTATTGAAGCCATATGCAAATCAATTAGTGGGGAGATG
TTGTGTATGGATCGGGATGTATCATGTCTTCAGCCTATAGAAAAACAACTTGTTTCGGAG
GGTTTTGGACCAATCTCAGAGGATGTTCCATTGAGTGGTAGTGCTTTATTTAGCTCAGTT
CTGCCAATCCAAGAAGAACAACAGACTGTATCACCTAATGCTTCACCAGTTTTACATCCC
CCTAAAAATGAAATTTCTGGTACTTTGTCAATTACTACGAGTGAGAGACTGAATTTTGAG
TCTTCCAATAAGATACATTCTAGAAAGAGGAAGCGAGTTGAGTGGATGACCATCGCCCAT
GTAGCTGAGCTTTGTCCTGATGCAGTTTCCGAGTACAATGATAATTATATGTCGAACCAT
AGGTCCCCAGAGTCCTTGCAAAAACTTAAGAAACATTTGTTTCACTTAGGATGGAAAATT
GAGCAACCAAAGGATTGCAGCATCACTAGGACACGGTACATTGCTCCTGATGGAAAAATA
TTCCAATCACTTCGTCAAGTTTGTAAGATGTTGGAAAAGTCAGAAACTTGGGCAGAAGGC
CAAAAAACATCATATGATGGTTCATCTGATGACCTCAACTTGTCTACTTGCCTGGCAAAA
ACAAAGACATGCAGTGAGGTGTCTGAGCTGCCATATACTTCTCAAGAACCAATCATTGAT
CCTGAAATTTGCCGTGAAGCTGTAATTGAATATTGTTCACTGGGATCACCAGATAATCCT
GCCTATAAGAAGTTGAACAGTGGGGAAAAGAAGTTTATGATCATGAAAGCTAAGAAGCAC
CTAGTTGCAATAGGATGGATATTTTATTATTATCGGGGAAGGGACAAGAGAGAATTGCGG
TACCATTCTCCTCATGGGAAAACATTCAACACTCTTCTAGCGGCATGCAGATGGTGTATG
CAGCAGTGGAAAGCTGAGGAACAGATGCCTGAATTATTTTCCCGGTCAACTGTTCTGGAA
TATCAGGGGAATTCGGCACCTCAAAAAACCTCATGTGAGAAGTTATCAGCGGCGACATTT
TCTGTCCTGCCACATGCGAAAGAACCTGCTCAACTTAATAAAGTCACAGTTTGTGAAATC
AGCAAAACAAGAAAGAAGACTAATCATGCAGGTGGCATGTTGAGAAAAGGAAATGAATCT
AGATCTTCAAGAACAGTAACAGATGGTACAGAATCTCAGTCTTCAGTTGGTCTGTTGCGA
TCCAGTAAAAAAGCTCGGCAGGGAACACTTTCTTCTTCCTTGCATCATACACCTCGAACA
GTTTTATCTTGGTTGATTGACAATAATGTGGTTCTGCCGCGTGCGAAAGTGCAGTATCGT
GGGAAAAGAGATGGCCGTCCAATGGCAGAAGGGCGGATCACTCGTGCAGGGATCAAATGC
AAGTGCTGCCAAAAAGTTTATGGAATTAGCAGTTTTGAGGTGCATGCTGGAAGCAGTTAT
CACCGACCTTCAGCAAATATATTTTTGGAAGATGGACGATCCCTTCTTGATTGTCAACTG
CAGATGAAAGAAAAGGCTAGTTTAAGACACACGAGGAAGAGACCACCTTTGTTGAAGAAG
CGCAGCCATTTGGGCACAAATGACTATGTGTGTTCCGTGTGCCATTATGGTGGTGAATTA
CTTCTGTGTGATGAATGCCCATCTTCCTTTCATACTGGTTGCCTTGGAATGAAGGAGATC
CCAGATGGAGAGTGGTTTTGCCCATCATGCTGTTGTGAAACCTGTGGCCAGAGCAGATTT
GATAAAAACAAAGACCACTTTACCGACAGCAGTCTACTTATCTGCAGTCAGTGTGATCAC
AAGTATCATGCTCGGTGCGTGAGAAATAAGGGTCTTCAAAAGCTGGATTATTATCCTGTA
GGAAGTTGGTTTTGCAATAAGAGATGTGAGCAGATATGTTTGGGTATCCGCCAACTTTTG
GCAAAGCCAGTTATGGTGGGAATTGATAACCTCACTTGGACTTTATTGAAATACGTGAAA
CCTGATGATTTTGATTTGGATGCTGCTAATGATGAGTTCATCTTGGAGACTTATAGTAAA
CTTAGTGTCGCTCTGGATGTGATGCATGAATGCTTTGAGCCTGTCAAAGAACCTTACACA
AGGAGAGATCTTATGGAAGATGTTATCTTTAATAGATGGTCAGAGCTGCATCGCTTAAAT
TTTCAGGGTTTCTATACTGTGCTTCTGGAAAGAAATGATGAAGTTATTTCAGTAGCAACT
GTAAGGGTTTATGGAGAAAAGGTAGCCGAGGTTCCTCTTGTGGCAACAAGATTTCAGTAC
CGCCGACTTGGAATGTGTCGCATCTTAATGAATGAGCTTGAAAAGAAACTCATGGAATTA
GGAGTTGAGAGGCTAGTTTTGCCTGCTGTCCCCACCGTGCTAAACACATGGACCACTTCA
TTTGGTTTCTCAATGGTGAAAGAATCTCAGAGGTTAAACTTCTTGAATTACACTTTCCTT
GATTTCCAGGGTACAATATTGTGTCAGAAACTTCTCCAGAATATCCCTCCAGAGGTATCA
AGTGAATCAACAGAAGCTTATCAAACTCAATTTGACCACATAAACAGCAAGGAGAATGTT
GAGTTGGATGGAAACAGTGCGCTTTCTGAGGTCTTCCAAGCTGAGCAAATTGAGGAGAGT
GAAATTGTGGACCAAGGATCTACAGAGTATGTTTCCCCTTTGATTTCTGTTTTCTAA

Peptide Sequence

PEP ID

PGSC0003DMP400038173
PEP Infomation

pacid=37455136 transcript=PGSC0003DMT400056778 locus=PGSC0003DMG400022079 ID=PGSC0003DMT400056778.v4.03 annot-version=v4.03
Sequence

MSMASKLQLHQNVEVRSIESGFLGSWHLATIIAFDNFVPQVQYHHLLSDDDASINLIESV
KLSPIRPFPPPLQFHTSLLSYGQCVDLFYQDAWWEGVIFDHQNGALNRRVFFPDMGDEIN
AQLHNLRITQDWDEVSQQWKPRGSWMFLQIIQEIENLHPLFVSLKQIWYQIREKNGYQYL
KEWTSTSADSWRNLIKEVVHENAMLTVKHIFCESNTSPDFLEGGPLLEFSQPTIQVETYF
DNSAIVPFIEAICKSISGEMLCMDRDVSCLQPIEKQLVSEGFGPISEDVPLSGSALFSSV
LPIQEEQQTVSPNASPVLHPPKNEISGTLSITTSERLNFESSNKIHSRKRKRVEWMTIAH
VAELCPDAVSEYNDNYMSNHRSPESLQKLKKHLFHLGWKIEQPKDCSITRTRYIAPDGKI
FQSLRQVCKMLEKSETWAEGQKTSYDGSSDDLNLSTCLAKTKTCSEVSELPYTSQEPIID
PEICREAVIEYCSLGSPDNPAYKKLNSGEKKFMIMKAKKHLVAIGWIFYYYRGRDKRELR
YHSPHGKTFNTLLAACRWCMQQWKAEEQMPELFSRSTVLEYQGNSAPQKTSCEKLSAATF
SVLPHAKEPAQLNKVTVCEISKTRKKTNHAGGMLRKGNESRSSRTVTDGTESQSSVGLLR
SSKKARQGTLSSSLHHTPRTVLSWLIDNNVVLPRAKVQYRGKRDGRPMAEGRITRAGIKC
KCCQKVYGISSFEVHAGSSYHRPSANIFLEDGRSLLDCQLQMKEKASLRHTRKRPPLLKK
RSHLGTNDYVCSVCHYGGELLLCDECPSSFHTGCLGMKEIPDGEWFCPSCCCETCGQSRF
DKNKDHFTDSSLLICSQCDHKYHARCVRNKGLQKLDYYPVGSWFCNKRCEQICLGIRQLL
AKPVMVGIDNLTWTLLKYVKPDDFDLDAANDEFILETYSKLSVALDVMHECFEPVKEPYT
RRDLMEDVIFNRWSELHRLNFQGFYTVLLERNDEVISVATVRVYGEKVAEVPLVATRFQY
RRLGMCRILMNELEKKLMELGVERLVLPAVPTVLNTWTTSFGFSMVKESQRLNFLNYTFL
DFQGTILCQKLLQNIPPEVSSESTEAYQTQFDHINSKENVELDGNSALSEVFQAEQIEES
EIVDQGSTEYVSPLISVF*

Transcript Sequence

Transcript ID

PGSC0003DMT400056778
Transcript Infomation

pacid=37455136 locus=PGSC0003DMG400022079 ID=PGSC0003DMT400056778.v4.03 annot-version=v4.03
Sequence

ATGTCTATGGCTTCCAAACTACAACTTCATCAGAACGTTGAGGTGAGGAGTATTGAAAGT
GGATTCCTGGGTTCATGGCACTTAGCTACTATCATTGCTTTTGATAATTTTGTTCCACAA
GTTCAATACCATCACCTTCTCTCTGATGACGATGCTTCTATCAACTTGATTGAATCTGTT
AAGCTTTCTCCAATTAGGCCTTTCCCACCTCCACTTCAATTTCACACATCCCTTCTATCT
TATGGACAATGTGTTGATTTGTTTTATCAAGATGCTTGGTGGGAAGGAGTTATATTTGAT
CATCAAAATGGTGCCCTAAACCGCAGAGTTTTCTTTCCAGATATGGGTGATGAAATCAAT
GCTCAACTCCACAATCTACGTATAACTCAAGATTGGGATGAGGTTTCACAACAATGGAAG
CCTCGTGGTAGCTGGATGTTTCTTCAAATTATTCAGGAGATTGAGAATCTCCACCCCCTT
TTCGTCTCACTCAAACAAATTTGGTATCAAATCCGGGAGAAGAATGGCTACCAATACCTC
AAGGAATGGACATCTACTTCGGCTGATAGCTGGAGGAACTTGATCAAGGAAGTTGTGCAT
GAAAACGCCATGTTAACCGTCAAGCATATTTTTTGTGAGTCCAACACTTCACCAGACTTT
CTAGAGGGAGGTCCATTGCTAGAATTTTCACAACCCACTATTCAGGTTGAAACATATTTT
GATAACTCAGCCATTGTACCTTTTATTGAAGCCATATGCAAATCAATTAGTGGGGAGATG
TTGTGTATGGATCGGGATGTATCATGTCTTCAGCCTATAGAAAAACAACTTGTTTCGGAG
GGTTTTGGACCAATCTCAGAGGATGTTCCATTGAGTGGTAGTGCTTTATTTAGCTCAGTT
CTGCCAATCCAAGAAGAACAACAGACTGTATCACCTAATGCTTCACCAGTTTTACATCCC
CCTAAAAATGAAATTTCTGGTACTTTGTCAATTACTACGAGTGAGAGACTGAATTTTGAG
TCTTCCAATAAGATACATTCTAGAAAGAGGAAGCGAGTTGAGTGGATGACCATCGCCCAT
GTAGCTGAGCTTTGTCCTGATGCAGTTTCCGAGTACAATGATAATTATATGTCGAACCAT
AGGTCCCCAGAGTCCTTGCAAAAACTTAAGAAACATTTGTTTCACTTAGGATGGAAAATT
GAGCAACCAAAGGATTGCAGCATCACTAGGACACGGTACATTGCTCCTGATGGAAAAATA
TTCCAATCACTTCGTCAAGTTTGTAAGATGTTGGAAAAGTCAGAAACTTGGGCAGAAGGC
CAAAAAACATCATATGATGGTTCATCTGATGACCTCAACTTGTCTACTTGCCTGGCAAAA
ACAAAGACATGCAGTGAGGTGTCTGAGCTGCCATATACTTCTCAAGAACCAATCATTGAT
CCTGAAATTTGCCGTGAAGCTGTAATTGAATATTGTTCACTGGGATCACCAGATAATCCT
GCCTATAAGAAGTTGAACAGTGGGGAAAAGAAGTTTATGATCATGAAAGCTAAGAAGCAC
CTAGTTGCAATAGGATGGATATTTTATTATTATCGGGGAAGGGACAAGAGAGAATTGCGG
TACCATTCTCCTCATGGGAAAACATTCAACACTCTTCTAGCGGCATGCAGATGGTGTATG
CAGCAGTGGAAAGCTGAGGAACAGATGCCTGAATTATTTTCCCGGTCAACTGTTCTGGAA
TATCAGGGGAATTCGGCACCTCAAAAAACCTCATGTGAGAAGTTATCAGCGGCGACATTT
TCTGTCCTGCCACATGCGAAAGAACCTGCTCAACTTAATAAAGTCACAGTTTGTGAAATC
AGCAAAACAAGAAAGAAGACTAATCATGCAGGTGGCATGTTGAGAAAAGGAAATGAATCT
AGATCTTCAAGAACAGTAACAGATGGTACAGAATCTCAGTCTTCAGTTGGTCTGTTGCGA
TCCAGTAAAAAAGCTCGGCAGGGAACACTTTCTTCTTCCTTGCATCATACACCTCGAACA
GTTTTATCTTGGTTGATTGACAATAATGTGGTTCTGCCGCGTGCGAAAGTGCAGTATCGT
GGGAAAAGAGATGGCCGTCCAATGGCAGAAGGGCGGATCACTCGTGCAGGGATCAAATGC
AAGTGCTGCCAAAAAGTTTATGGAATTAGCAGTTTTGAGGTGCATGCTGGAAGCAGTTAT
CACCGACCTTCAGCAAATATATTTTTGGAAGATGGACGATCCCTTCTTGATTGTCAACTG
CAGATGAAAGAAAAGGCTAGTTTAAGACACACGAGGAAGAGACCACCTTTGTTGAAGAAG
CGCAGCCATTTGGGCACAAATGACTATGTGTGTTCCGTGTGCCATTATGGTGGTGAATTA
CTTCTGTGTGATGAATGCCCATCTTCCTTTCATACTGGTTGCCTTGGAATGAAGGAGATC
CCAGATGGAGAGTGGTTTTGCCCATCATGCTGTTGTGAAACCTGTGGCCAGAGCAGATTT
GATAAAAACAAAGACCACTTTACCGACAGCAGTCTACTTATCTGCAGTCAGTGTGATCAC
AAGTATCATGCTCGGTGCGTGAGAAATAAGGGTCTTCAAAAGCTGGATTATTATCCTGTA
GGAAGTTGGTTTTGCAATAAGAGATGTGAGCAGATATGTTTGGGTATCCGCCAACTTTTG
GCAAAGCCAGTTATGGTGGGAATTGATAACCTCACTTGGACTTTATTGAAATACGTGAAA
CCTGATGATTTTGATTTGGATGCTGCTAATGATGAGTTCATCTTGGAGACTTATAGTAAA
CTTAGTGTCGCTCTGGATGTGATGCATGAATGCTTTGAGCCTGTCAAAGAACCTTACACA
AGGAGAGATCTTATGGAAGATGTTATCTTTAATAGATGGTCAGAGCTGCATCGCTTAAAT
TTTCAGGGTTTCTATACTGTGCTTCTGGAAAGAAATGATGAAGTTATTTCAGTAGCAACT
GTAAGGGTTTATGGAGAAAAGGTAGCCGAGGTTCCTCTTGTGGCAACAAGATTTCAGTAC
CGCCGACTTGGAATGTGTCGCATCTTAATGAATGAGCTTGAAAAGAAACTCATGGAATTA
GGAGTTGAGAGGCTAGTTTTGCCTGCTGTCCCCACCGTGCTAAACACATGGACCACTTCA
TTTGGTTTCTCAATGGTGAAAGAATCTCAGAGGTTAAACTTCTTGAATTACACTTTCCTT
GATTTCCAGGGTACAATATTGTGTCAGAAACTTCTCCAGAATATCCCTCCAGAGGTATCA
AGTGAATCAACAGAAGCTTATCAAACTCAATTTGACCACATAAACAGCAAGGAGAATGTT
GAGTTGGATGGAAACAGTGCGCTTTCTGAGGTCTTCCAAGCTGAGCAAATTGAGGAGAGT
GAAATTGTGGACCAAGGATCTACAGAGTATGTTTCCCCTTTGATTTCTGTTTTCTAA