Plant GARDEN
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TOP > About the Species(Solanum tuberosum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400056725
CDS Infomation

pacid=37429005 polypeptide=PGSC0003DMP400038147 locus=PGSC0003DMG400022063 ID=PGSC0003DMT400056725.v4.03 annot-version=v4.03
Sequence

ATGGATAAAGGATGGGGACTTACACTTGAGAATAAGCCATTTTTCGGGTTTAATCATATG
ATGAACCGTAGAGAAGAGCAATTAGTAGCTGATCATGACAAAAAAGAAGTTGATTTCTTC
TCTCATCATAACAGAAAGCCTATACATCATGATTTTATAAAGAAGGAAGATTCGAATACT
ACTACTATTACTACGCCATCTGAATTCATCGTAAATACTGGTTTGCAGCTTGTGACTGCA
AGTGATCAATCAACGGTAGATGATGGGATTTCGTCGGAGATAATACTAGAAGAAGAAAGA
GCCAAAAATGAGTTAGCACAACTACAAGTTGAATTGAGAAGGATGAACGCCGAAAATCAA
CGTTTGAGAGGGATGCTTACCCAAGTCACCAACAATTATACTGCACTTCAGATGCATCTT
GCTACACTCATGCAACAACAACAGCAGCAGCAGATTTCAACAACTCAAAATACACATGAC
CAGATTGTGGAAGCAAAGTTTGATCAAGAAAAAATAGTTCCAGGAAGATTCTTGGAATTA
GGTCGAAGTGATAACGATCTATCTCATAATTCCCATTCTTCATCAGAAGAAAGAACAGTT
TCTAAATCACCTCGAAACGATACACAAGTTACAAGGCATAATAAGGCCGGCAGAGAAGAA
AGCCCAGAATCTGAAAGTTGGGTACCTAACAAGGTCCCCAAATTGAATTCCTCAATGCCA
ACAGATGCAACCATGAGGAAAGCTCGTGTCTCCGTTCGTGCCCGATCAGAAGCTCCCATG
ATTAGTGATGGATGTCAATGGAGAAAATACGGGCAAAAAATGGCGAAAGGCAATCCATGT
CCCCGAGCTTATTATCGCTGCACCATGGCTGTTGGTTGCCCCGTGCGCAAACAGGTTCAA
AGGTGTGCTGAGGATCGGACAATTTTGAATACAACTTATGAAGGTACACACAACCACCCC
CTACCACCAGCAGCAATGGCCATGGCATCAACTACATCAGCTGCAGCAAATATGTTGCTA
TCAGGTTCGATGTCAAGTGCAGATGGGACGTTAATGAATCCGAATTTCCTAGCAAGGACT
ATGCTTCCATGTTCGTCAAGTATGGCGACTATTTCAGCATCAGCTCCATTTCCCACTATA
ACATTGGACCTAACTCAAAACCAAAACTCGTTGACTTATAATCAAACAAGTACTCCAATT
TCTCAATTTCAAATTCCTTTCCAATCAAGCCCTCAACATCCGAACTTTATTACATCAATG
CCACCACCACCACCAATGCCTCAGGTTTTACATAACCAATCAAAGTTTTCAGGCCTACAA
ATTTCTCAAGACATTCATCAACCTCAACAATTACAACATGTTCAAAACCACCGATCATTT
TCCGACACGCTCACGGCCGCCACTGCTGCCATCACGGCCGATCCCAATTTCACTGCTGCT
CTGGCCGCGGCCATCTCGTCCATAATTACTGGTCCTGGAAAAGAACAGTAG

Peptide Sequence

PEP ID

PGSC0003DMP400038147
PEP Infomation

pacid=37429005 transcript=PGSC0003DMT400056725 locus=PGSC0003DMG400022063 ID=PGSC0003DMT400056725.v4.03 annot-version=v4.03
Sequence

MDKGWGLTLENKPFFGFNHMMNRREEQLVADHDKKEVDFFSHHNRKPIHHDFIKKEDSNT
TTITTPSEFIVNTGLQLVTASDQSTVDDGISSEIILEEERAKNELAQLQVELRRMNAENQ
RLRGMLTQVTNNYTALQMHLATLMQQQQQQQISTTQNTHDQIVEAKFDQEKIVPGRFLEL
GRSDNDLSHNSHSSSEERTVSKSPRNDTQVTRHNKAGREESPESESWVPNKVPKLNSSMP
TDATMRKARVSVRARSEAPMISDGCQWRKYGQKMAKGNPCPRAYYRCTMAVGCPVRKQVQ
RCAEDRTILNTTYEGTHNHPLPPAAMAMASTTSAAANMLLSGSMSSADGTLMNPNFLART
MLPCSSSMATISASAPFPTITLDLTQNQNSLTYNQTSTPISQFQIPFQSSPQHPNFITSM
PPPPPMPQVLHNQSKFSGLQISQDIHQPQQLQHVQNHRSFSDTLTAATAAITADPNFTAA
LAAAISSIITGPGKEQ*

Transcript Sequence

Transcript ID

PGSC0003DMT400056725
Transcript Infomation

pacid=37429005 locus=PGSC0003DMG400022063 ID=PGSC0003DMT400056725.v4.03 annot-version=v4.03
Sequence

ATGGATAAAGGATGGGGACTTACACTTGAGAATAAGCCATTTTTCGGGTTTAATCATATG
ATGAACCGTAGAGAAGAGCAATTAGTAGCTGATCATGACAAAAAAGAAGTTGATTTCTTC
TCTCATCATAACAGAAAGCCTATACATCATGATTTTATAAAGAAGGAAGATTCGAATACT
ACTACTATTACTACGCCATCTGAATTCATCGTAAATACTGGTTTGCAGCTTGTGACTGCA
AGTGATCAATCAACGGTAGATGATGGGATTTCGTCGGAGATAATACTAGAAGAAGAAAGA
GCCAAAAATGAGTTAGCACAACTACAAGTTGAATTGAGAAGGATGAACGCCGAAAATCAA
CGTTTGAGAGGGATGCTTACCCAAGTCACCAACAATTATACTGCACTTCAGATGCATCTT
GCTACACTCATGCAACAACAACAGCAGCAGCAGATTTCAACAACTCAAAATACACATGAC
CAGATTGTGGAAGCAAAGTTTGATCAAGAAAAAATAGTTCCAGGAAGATTCTTGGAATTA
GGTCGAAGTGATAACGATCTATCTCATAATTCCCATTCTTCATCAGAAGAAAGAACAGTT
TCTAAATCACCTCGAAACGATACACAAGTTACAAGGCATAATAAGGCCGGCAGAGAAGAA
AGCCCAGAATCTGAAAGTTGGGTACCTAACAAGGTCCCCAAATTGAATTCCTCAATGCCA
ACAGATGCAACCATGAGGAAAGCTCGTGTCTCCGTTCGTGCCCGATCAGAAGCTCCCATG
ATTAGTGATGGATGTCAATGGAGAAAATACGGGCAAAAAATGGCGAAAGGCAATCCATGT
CCCCGAGCTTATTATCGCTGCACCATGGCTGTTGGTTGCCCCGTGCGCAAACAGGTTCAA
AGGTGTGCTGAGGATCGGACAATTTTGAATACAACTTATGAAGGTACACACAACCACCCC
CTACCACCAGCAGCAATGGCCATGGCATCAACTACATCAGCTGCAGCAAATATGTTGCTA
TCAGGTTCGATGTCAAGTGCAGATGGGACGTTAATGAATCCGAATTTCCTAGCAAGGACT
ATGCTTCCATGTTCGTCAAGTATGGCGACTATTTCAGCATCAGCTCCATTTCCCACTATA
ACATTGGACCTAACTCAAAACCAAAACTCGTTGACTTATAATCAAACAAGTACTCCAATT
TCTCAATTTCAAATTCCTTTCCAATCAAGCCCTCAACATCCGAACTTTATTACATCAATG
CCACCACCACCACCAATGCCTCAGGTTTTACATAACCAATCAAAGTTTTCAGGCCTACAA
ATTTCTCAAGACATTCATCAACCTCAACAATTACAACATGTTCAAAACCACCGATCATTT
TCCGACACGCTCACGGCCGCCACTGCTGCCATCACGGCCGATCCCAATTTCACTGCTGCT
CTGGCCGCGGCCATCTCGTCCATAATTACTGGTCCTGGAAAAGAACAGTAG