Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400056721
CDS Infomation

pacid=37424577 polypeptide=PGSC0003DMP400038143 locus=PGSC0003DMG400022060 ID=PGSC0003DMT400056721.v4.03 annot-version=v4.03
Sequence

ATGGCGGATGTTGTACAGTTCAAGCTGGAGCGTATGCTCCCTGAGCTCGACGACCTTGAA
AAACGCAGTCTATTTAGCCGCCAGGAAATAGCGGAAATAGTGAAACAGCGCCGGAAATTT
GAGTACAGGTTGAAGAGACCTAGTCCATTGAAGCAGGATTTTGTAGCATACATTGACTAT
GAGAAAAGTCTCGATTCTCTACGACTTCTACGTAAAAAAGCTCAGATGAAAACAACCGGC
GATAGAAAGTTGAAAAAGTCTGTTTCAGATTATGCTGGAGTTTCCAGGATTATTGAGATT
TATCGGCTCGCCACCACTAGGTTTAAGGGAGATATAGAGCTTTGGTTTCAGTATTTGGAG
TTCTGTAGGGAGCGAAGGAATGGTCGAATGAAGAAGGCCCTTGCGCAGGTAATCAGGTTT
CACCCTAAGGTGCCTGGAGTATGGATATATGCTGCAGCTTGGGAATTCGATAACAACTTA
AATGCTGCTGCTGCTCGTGCCCTAATGCATAGCGGCTTGAGAGCATGTCCAACTTCTGAG
GATCTGTGGGTAGAATATCTCCGAATGGAGCTTACATACCTAAATAAATTAAAGGCCCGC
AAAGTTGTGCTAGGAGAGGATGAGGGAACACTAGCTCGTTCTGGCAAAAGTGCTAAAGAG
GAACAGTGGAGAGATGAGAACAAGGAATTATTTATTGTCCTTGATGATAAAAGAGAGGAA
GACAAATTATCCAACCTTCACGACGGAGACTCGAAGGAGAAATTAGATTTATTTAGGGAA
CAAGGTTTAAGTGTTCTTCAGACAGTTTACGGTGGTTCTATTAAAGCCCTCCCTTCCAGT
TTCAGTTTAAGAACAAAGTTTCTTGACATACTAGAAGCAACAGATTTAGGTCATTCAGAA
GATATGCGAAATGAAATACTTGCTGATATGAAACGGGACTTCTCAAAAGAACCAAAATAT
TGGGATTGGCTTGCAAGACAGGAAGTGATTGATCTTAATAATCCAGAGACTACTGGAGCA
ATGACAGCTGATCAGTTAAGCAGAGCAATTGAGGTTTATGAGGAGGGTTTAAAAATTGTG
CCTTCAGCTTCAATGTTTGATTGTTATGCAAAGTTCCTGATGGACGTCATCCATTTTAAA
AATAAGGGAAGTCAATCTTCTGAGCTCTTCAGTACAGCTAGGCATGTTATGGATCCTATT
TCACATCTCCTGGTAGTATATGAAAAGGCTGAAACCATGGGATGCATCACAGAAGATCTT
GCTTGCCAGCATGTTTCTTTTCTACTGCAACTTGGGAAAGTAGATGAAGCTAAGACTTTG
GCGGAGAAATTGTGTTCTGGAAAATTTTCAGAAGCAGTGCAGCTATGGGCTTTACGGTTC
TCAATAGAAATGAGATTTATCCAGAAGAACTGTACTCCAAATAAGGCAGCTCTGTCTTCT
ATCTTTGAACTCCTGAGAAGTGTTTTGTTGAAACTTCCCATATTAGAAGCAGAAACTATA
TGGCTTATGGCGCTCAAATATTTTTCCACTCATAAGAAATTCTTTGACAAGTTGGTTGAG
ACTTCTATATCTTTACTGGCCAAAGATGGTGGAAGTGATGATGGTTTTTCCCTCTCTACT
ACCATCGTCAATTTTGTTCTGCAAAGGGATGGACTTGGGAGTGCTAGAGAGTTGTATAAG
AGATTTCTTGCTTTACCGCATCCAGGACTTTCTTTATACAGGAATTGCATTGAGCTGGAA
TTGAACCTTGCGTCTAGTGGAGATAAGATTAGTCTTGGAAATGTCCGAAAACTATTTGAA
ACTGCACTTACAACTTATGATCAAGATGTCAGATTGTGGCAAGACTATTATAATATGGAA
ATCAAGATGGGAACATCAGAAACTGCAGCAGCCGTTCACTGGCGAGCACGGAAAACCCTC
AAGAAGAGTATTTCCCTTGTACCCTCACTGGATATGTGA

Peptide Sequence

PEP ID

PGSC0003DMP400038143
PEP Infomation

pacid=37424577 transcript=PGSC0003DMT400056721 locus=PGSC0003DMG400022060 ID=PGSC0003DMT400056721.v4.03 annot-version=v4.03
Sequence

MADVVQFKLERMLPELDDLEKRSLFSRQEIAEIVKQRRKFEYRLKRPSPLKQDFVAYIDY
EKSLDSLRLLRKKAQMKTTGDRKLKKSVSDYAGVSRIIEIYRLATTRFKGDIELWFQYLE
FCRERRNGRMKKALAQVIRFHPKVPGVWIYAAAWEFDNNLNAAAARALMHSGLRACPTSE
DLWVEYLRMELTYLNKLKARKVVLGEDEGTLARSGKSAKEEQWRDENKELFIVLDDKREE
DKLSNLHDGDSKEKLDLFREQGLSVLQTVYGGSIKALPSSFSLRTKFLDILEATDLGHSE
DMRNEILADMKRDFSKEPKYWDWLARQEVIDLNNPETTGAMTADQLSRAIEVYEEGLKIV
PSASMFDCYAKFLMDVIHFKNKGSQSSELFSTARHVMDPISHLLVVYEKAETMGCITEDL
ACQHVSFLLQLGKVDEAKTLAEKLCSGKFSEAVQLWALRFSIEMRFIQKNCTPNKAALSS
IFELLRSVLLKLPILEAETIWLMALKYFSTHKKFFDKLVETSISLLAKDGGSDDGFSLST
TIVNFVLQRDGLGSARELYKRFLALPHPGLSLYRNCIELELNLASSGDKISLGNVRKLFE
TALTTYDQDVRLWQDYYNMEIKMGTSETAAAVHWRARKTLKKSISLVPSLDM*

Transcript Sequence

Transcript ID

PGSC0003DMT400056721
Transcript Infomation

pacid=37424577 locus=PGSC0003DMG400022060 ID=PGSC0003DMT400056721.v4.03 annot-version=v4.03
Sequence

ATGGCGGATGTTGTACAGTTCAAGCTGGAGCGTATGCTCCCTGAGCTCGACGACCTTGAA
AAACGCAGTCTATTTAGCCGCCAGGAAATAGCGGAAATAGTGAAACAGCGCCGGAAATTT
GAGTACAGGTTGAAGAGACCTAGTCCATTGAAGCAGGATTTTGTAGCATACATTGACTAT
GAGAAAAGTCTCGATTCTCTACGACTTCTACGTAAAAAAGCTCAGATGAAAACAACCGGC
GATAGAAAGTTGAAAAAGTCTGTTTCAGATTATGCTGGAGTTTCCAGGATTATTGAGATT
TATCGGCTCGCCACCACTAGGTTTAAGGGAGATATAGAGCTTTGGTTTCAGTATTTGGAG
TTCTGTAGGGAGCGAAGGAATGGTCGAATGAAGAAGGCCCTTGCGCAGGTAATCAGGTTT
CACCCTAAGGTGCCTGGAGTATGGATATATGCTGCAGCTTGGGAATTCGATAACAACTTA
AATGCTGCTGCTGCTCGTGCCCTAATGCATAGCGGCTTGAGAGCATGTCCAACTTCTGAG
GATCTGTGGGTAGAATATCTCCGAATGGAGCTTACATACCTAAATAAATTAAAGGCCCGC
AAAGTTGTGCTAGGAGAGGATGAGGGAACACTAGCTCGTTCTGGCAAAAGTGCTAAAGAG
GAACAGTGGAGAGATGAGAACAAGGAATTATTTATTGTCCTTGATGATAAAAGAGAGGAA
GACAAATTATCCAACCTTCACGACGGAGACTCGAAGGAGAAATTAGATTTATTTAGGGAA
CAAGGTTTAAGTGTTCTTCAGACAGTTTACGGTGGTTCTATTAAAGCCCTCCCTTCCAGT
TTCAGTTTAAGAACAAAGTTTCTTGACATACTAGAAGCAACAGATTTAGGTCATTCAGAA
GATATGCGAAATGAAATACTTGCTGATATGAAACGGGACTTCTCAAAAGAACCAAAATAT
TGGGATTGGCTTGCAAGACAGGAAGTGATTGATCTTAATAATCCAGAGACTACTGGAGCA
ATGACAGCTGATCAGTTAAGCAGAGCAATTGAGGTTTATGAGGAGGGTTTAAAAATTGTG
CCTTCAGCTTCAATGTTTGATTGTTATGCAAAGTTCCTGATGGACGTCATCCATTTTAAA
AATAAGGGAAGTCAATCTTCTGAGCTCTTCAGTACAGCTAGGCATGTTATGGATCCTATT
TCACATCTCCTGGTAGTATATGAAAAGGCTGAAACCATGGGATGCATCACAGAAGATCTT
GCTTGCCAGCATGTTTCTTTTCTACTGCAACTTGGGAAAGTAGATGAAGCTAAGACTTTG
GCGGAGAAATTGTGTTCTGGAAAATTTTCAGAAGCAGTGCAGCTATGGGCTTTACGGTTC
TCAATAGAAATGAGATTTATCCAGAAGAACTGTACTCCAAATAAGGCAGCTCTGTCTTCT
ATCTTTGAACTCCTGAGAAGTGTTTTGTTGAAACTTCCCATATTAGAAGCAGAAACTATA
TGGCTTATGGCGCTCAAATATTTTTCCACTCATAAGAAATTCTTTGACAAGTTGGTTGAG
ACTTCTATATCTTTACTGGCCAAAGATGGTGGAAGTGATGATGGTTTTTCCCTCTCTACT
ACCATCGTCAATTTTGTTCTGCAAAGGGATGGACTTGGGAGTGCTAGAGAGTTGTATAAG
AGATTTCTTGCTTTACCGCATCCAGGACTTTCTTTATACAGGAATTGCATTGAGCTGGAA
TTGAACCTTGCGTCTAGTGGAGATAAGATTAGTCTTGGAAATGTCCGAAAACTATTTGAA
ACTGCACTTACAACTTATGATCAAGATGTCAGATTGTGGCAAGACTATTATAATATGGAA
ATCAAGATGGGAACATCAGAAACTGCAGCAGCCGTTCACTGGCGAGCACGGAAAACCCTC
AAGAAGAGTATTTCCCTTGTACCCTCACTGGATATGTGA