Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400056710
CDS Infomation

pacid=37456660 polypeptide=PGSC0003DMP400038137 locus=PGSC0003DMG400022055 ID=PGSC0003DMT400056710.v4.03 annot-version=v4.03
Sequence

ATGGATTCGAAACAAGCACCGGTGGTTGAGTGCTCGAAATACACGAAAAGGGTGATGTTG
AAAACTTTATTTGGACGTAGTGATGGTGAGGTGGGGTTAATTGGTCAGAGGGTTGTAATT
GGAGGATGGGTTAAGTCCTCCAGGGAGATTAGGAAACAACCTGTAACGCCGCATTCTGTA
CCGGCACAGGTGGTGAGTACAAAAGATGTTACATGTTCTGAGGTTCTTCAATCTCGGATT
CCATTACTCAGGTCTATTATGAAGGTCTTTGGGGCAGGGGAATATCGTGTACGTGAAAAA
ATTAATGTTGTTTTTCAGCCACAACCTTCGGTGTCAATATTGCAAATTAGTGATGGTTCT
TGTGTGCCCAGTCTTCAGGTTCTGGTGGACTCGGCACTAGCGACTCCGTGCCAAGTTATG
GCTACGGGGACATGTGTATTAATTGAAGGTATGCTGCAGCAGCCATCACTGCAGGGGAAG
CATGTTGTTGAGCTCCAAGCAGAGAAAATCCTACATCTTGGTTTGGTAGATCAATCTAAT
TATCCGTTATCTAAGAAGCGATTGCCTCTTGAATCTTTAAGAGATTGTTCCCACTTTCGG
CCTCGGACAACCACGGTGGCATCGGTCATGCGAATTCATAATGCACTTACTTGGGCAACT
CATGGATTCTTCCAAGATCAAGGGTTCCTTCACGTTCAAGTACCCATACTTACAAGCACT
GATTCTGAAGGTTTTAGCGAGAAATTTGTTGTTACAACTCTTCTTAACAAGGGCAAAAAC
TATGACCAAATTAGTTCCACCGAAAATGCTGGAGTGAGTGTTGAAGCCATACGGGCTTCT
ATAAAAGAAAAATCTAAGAAAGTTGAAGAACTTAACAGAACCAATAGCAATAAGGAAGCT
CTATTTGCTGCACAACAGGACTTGAAGAAAACACAGGAGCTAGTTTCACAGTTAGAATCT
AGGCAAAAAGCAAACTCTGGAGTCACAATTGAAACAAGAAAATTTGACTTCTCTAAAGAT
TTCTTTGCACGCCAGACTTACCTAACAGTTTCTGGTCGTCTTCATCTGGAGAGTCAAGCA
TGTGGTCTTGGAAATGTCTACTCATTTGGCCCCAGATTTCAAGCAGTGAAATCAGAATCG
AAAAAGTCATTAGCTGAGACATGGATGGTAGATGTTGAAATGGCCTTCTCAGAGTTAGAG
GATGCCATGGAATGCGCGAACGACTTTTTGAAGTTTGTATGCAAAAGGATTTCAGAGGGT
TACATGGAAGATCTACAATTTATCTTGAAACGGATAGACAAAAAAGTTATGGAGCGCCTT
CAGTTAACACTATCAAGTTCATTTGAAAGGATTTCCTATGCCGAAGCCATAGAAGTTCTG
AGACAGGTTCCTGGCAAGAGATTTCAGGGTAAGATAGAATTTGGAGTTTCATTGACTGAA
GAACATGAAAGTTATTTGGTTGATGAGATATATAAAAAGCCAGTCATTATATACAACCAT
CCAAAAGGACTTAGACCATTTTATGTCCATTTGAATGATGATGGGATGACAGTTGCAACA
TTTGATGTGGTTTTACCAAAGGTAGGAACTGTGATTAGGGGAAGCCAAAGTGAAGAACGC
TTCAATGTGCTGAGCTCAAGGATGGAAGTATTGGGCTTGCAAAAACAGCAGTACGAATGG
TATCTAGATCTTCGCAGACATGGCTCTGTCAAAACCTCCGGTTTCAGCCTAATGCTTGAA
CCTTTGGTGCTTTATGCCACTGGCCTGAATGATGTCAAAGATGTCGTCCCTTTCCCTAGA
AGTTTCGGCAGAGCTAATAACTAA

Peptide Sequence

PEP ID

PGSC0003DMP400038137
PEP Infomation

pacid=37456660 transcript=PGSC0003DMT400056710 locus=PGSC0003DMG400022055 ID=PGSC0003DMT400056710.v4.03 annot-version=v4.03
Sequence

MDSKQAPVVECSKYTKRVMLKTLFGRSDGEVGLIGQRVVIGGWVKSSREIRKQPVTPHSV
PAQVVSTKDVTCSEVLQSRIPLLRSIMKVFGAGEYRVREKINVVFQPQPSVSILQISDGS
CVPSLQVLVDSALATPCQVMATGTCVLIEGMLQQPSLQGKHVVELQAEKILHLGLVDQSN
YPLSKKRLPLESLRDCSHFRPRTTTVASVMRIHNALTWATHGFFQDQGFLHVQVPILTST
DSEGFSEKFVVTTLLNKGKNYDQISSTENAGVSVEAIRASIKEKSKKVEELNRTNSNKEA
LFAAQQDLKKTQELVSQLESRQKANSGVTIETRKFDFSKDFFARQTYLTVSGRLHLESQA
CGLGNVYSFGPRFQAVKSESKKSLAETWMVDVEMAFSELEDAMECANDFLKFVCKRISEG
YMEDLQFILKRIDKKVMERLQLTLSSSFERISYAEAIEVLRQVPGKRFQGKIEFGVSLTE
EHESYLVDEIYKKPVIIYNHPKGLRPFYVHLNDDGMTVATFDVVLPKVGTVIRGSQSEER
FNVLSSRMEVLGLQKQQYEWYLDLRRHGSVKTSGFSLMLEPLVLYATGLNDVKDVVPFPR
SFGRANN*

Transcript Sequence

Transcript ID

PGSC0003DMT400056710
Transcript Infomation

pacid=37456660 locus=PGSC0003DMG400022055 ID=PGSC0003DMT400056710.v4.03 annot-version=v4.03
Sequence

ATGGATTCGAAACAAGCACCGGTGGTTGAGTGCTCGAAATACACGAAAAGGGTGATGTTG
AAAACTTTATTTGGACGTAGTGATGGTGAGGTGGGGTTAATTGGTCAGAGGGTTGTAATT
GGAGGATGGGTTAAGTCCTCCAGGGAGATTAGGAAACAACCTGTAACGCCGCATTCTGTA
CCGGCACAGGTGGTGAGTACAAAAGATGTTACATGTTCTGAGGTTCTTCAATCTCGGATT
CCATTACTCAGGTCTATTATGAAGGTCTTTGGGGCAGGGGAATATCGTGTACGTGAAAAA
ATTAATGTTGTTTTTCAGCCACAACCTTCGGTGTCAATATTGCAAATTAGTGATGGTTCT
TGTGTGCCCAGTCTTCAGGTTCTGGTGGACTCGGCACTAGCGACTCCGTGCCAAGTTATG
GCTACGGGGACATGTGTATTAATTGAAGGTATGCTGCAGCAGCCATCACTGCAGGGGAAG
CATGTTGTTGAGCTCCAAGCAGAGAAAATCCTACATCTTGGTTTGGTAGATCAATCTAAT
TATCCGTTATCTAAGAAGCGATTGCCTCTTGAATCTTTAAGAGATTGTTCCCACTTTCGG
CCTCGGACAACCACGGTGGCATCGGTCATGCGAATTCATAATGCACTTACTTGGGCAACT
CATGGATTCTTCCAAGATCAAGGGTTCCTTCACGTTCAAGTACCCATACTTACAAGCACT
GATTCTGAAGGTTTTAGCGAGAAATTTGTTGTTACAACTCTTCTTAACAAGGGCAAAAAC
TATGACCAAATTAGTTCCACCGAAAATGCTGGAGTGAGTGTTGAAGCCATACGGGCTTCT
ATAAAAGAAAAATCTAAGAAAGTTGAAGAACTTAACAGAACCAATAGCAATAAGGAAGCT
CTATTTGCTGCACAACAGGACTTGAAGAAAACACAGGAGCTAGTTTCACAGTTAGAATCT
AGGCAAAAAGCAAACTCTGGAGTCACAATTGAAACAAGAAAATTTGACTTCTCTAAAGAT
TTCTTTGCACGCCAGACTTACCTAACAGTTTCTGGTCGTCTTCATCTGGAGAGTCAAGCA
TGTGGTCTTGGAAATGTCTACTCATTTGGCCCCAGATTTCAAGCAGTGAAATCAGAATCG
AAAAAGTCATTAGCTGAGACATGGATGGTAGATGTTGAAATGGCCTTCTCAGAGTTAGAG
GATGCCATGGAATGCGCGAACGACTTTTTGAAGTTTGTATGCAAAAGGATTTCAGAGGGT
TACATGGAAGATCTACAATTTATCTTGAAACGGATAGACAAAAAAGTTATGGAGCGCCTT
CAGTTAACACTATCAAGTTCATTTGAAAGGATTTCCTATGCCGAAGCCATAGAAGTTCTG
AGACAGGTTCCTGGCAAGAGATTTCAGGGTAAGATAGAATTTGGAGTTTCATTGACTGAA
GAACATGAAAGTTATTTGGTTGATGAGATATATAAAAAGCCAGTCATTATATACAACCAT
CCAAAAGGACTTAGACCATTTTATGTCCATTTGAATGATGATGGGATGACAGTTGCAACA
TTTGATGTGGTTTTACCAAAGGTAGGAACTGTGATTAGGGGAAGCCAAAGTGAAGAACGC
TTCAATGTGCTGAGCTCAAGGATGGAAGTATTGGGCTTGCAAAAACAGCAGTACGAATGG
TATCTAGATCTTCGCAGACATGGCTCTGTCAAAACCTCCGGTTTCAGCCTAATGCTTGAA
CCTTTGGTGCTTTATGCCACTGGCCTGAATGATGTCAAAGATGTCGTCCCTTTCCCTAGA
AGTTTCGGCAGAGCTAATAACTAA