Plant GARDEN
How To ▶︎

JA

EN

TOP > About the Species(Solanum tuberosum ) > genome data >Gene sequences

Search

By Species By Keywords Genes By Markers By Traits

Let’s Analyze!!

SNP Detection
(lang=JA only) Sequences Other Tools

Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400056654
CDS Infomation

pacid=37450124 polypeptide=PGSC0003DMP400038099 locus=PGSC0003DMG400022031 ID=PGSC0003DMT400056654.v4.03 annot-version=v4.03
Sequence

ATGGACCATGAGCAACCTTCAGATGTATGTGACCTAATGCCTTGTAAATTGAAGTGGTCT
CAACTGACGTCCATTGACGATTCCTGGGTATTTTGGAGCACAAAACAGAACGACGAGTTG
GACTACCAGCAATCCATTATTAAGTCCATCAATTCTTATTCTGTCGTTTCCATCTGTCCA
ACTGAGAAATCGAGGATCCAATCTGTTATGGAGAAAATGTCGACTTCAAATATTTCTCTG
TTTCAATTCTGGGCACCCATCAAGGTCAATGGATCTACTTTCCTGTCCACTGCGGATCAA
CCATTTGTTTTCTATAAGAAACTTGATAAGAGGCTCTCTTCATACAGGAAGCTCTGTTTA
GATACTTTGATTCCCATTGACAACGAAATTCCATTTGGTCCCCCTGCACGAGTTTTCTCA
AAACTCTTGCCAGAATATAACCCTGACGTCTCAAGCTACTCCCCTGCAGAGTTTCCACTG
CCTCAAACTGCAATTCCCTTGGATTCTTATTGTGCATTTCCAGTGTTCAACATTCATGAT
CAGCAGTGCCTTGGTGTATTTGAGATTGTATCTACACTACCAGATTTCCGTCGTCTCAAC
ATTATTAAGGGGTTGAATTTCGAACCAGTTGGGTTCTACATTCCTTACTCAATAAACAAA
CTTTTTGAACCTCCAGAGCCGCTGTTTTGTGATATAAAGGACGGGATATCTAGGATCCGT
AAAGATAGGCGGATTCCCTTTGCACAAATTTGGATTCCTTTTTCCCAATCTGCCTCTTCG
AAAGTCTTGTATCGTGCTGCTGCCTCCACATATGAATATTTCAGTTTAATGTATCATGAA
TTTGAATATGCTTCTAAGGTCTATTTTATTAAGAGCGGTGAGGCATTGGTGGGGAGGGCA
TTTGCATCCCAAGGTTCATGCTTTTGCAAAGATGTTACTCTATTAAGCATCGAAGAGTAC
CCTTTGGTGCCTGGTGCACGAAAAGCTAGATTCACTCAGAGTTTTGCAATTTGTTTGCAA
AGTAGATGCTCCCCCAATATTGTTTGCGTAGTTGAGTACTTTCTGCCACGACGCAAAATG
GCTGTTAGAGATACAAAGACTTTCTTAAACATGCTTTTAACCACAATGAAAGAACAACTT
CCAGGTTTCACAGTTGCTTCTGGAAATGAACTAGGGCAGAGGATGCTTGTTGAAGTTGTT
AAAGTTTCCCCGAGTGATGAACTTGACTCCTTTGAAATTGGCCAAACTCTGCCGAGTGTT
CAAGCACTTCAGGATGGAGGAGAAACAACAGAAATTGATTCTTTCTGTCAACAGTCAAAT
TTACAGAACAGGGAGAATAATGTTGCTGCTGCACTACTAGTTCCTTCTTGTTCATCAGAC
AAGCGTGACTCACTCAACTGTGAAGGGACAGTGGAAGTTGATCCGTCACTGCCTCATCCA
ATAGAGGAAGCTGTGACAAACAGAGGAACCGTTAACATGGATGTAGCACATGATGACCAC
ATTGAGGATACAACTGAAATAATGCAACTTGATTCACACTTTGAGCAACCAAATTTAGAG
ACTAATTCTTCAGGAAATGCAACAACTAACAACGAGATAATTCATTCGCATAAGAAAAAC
GCAATACAAAGGATAGAAAAAGATCATGGGATTACTTGCAAGATTCTGGAGCAGCATTAT
GGCATGACTCTTGAAGGTACTGCGACAGATTTTAGCGCATCTGAAATGATTTATGCATAG

Peptide Sequence

PEP ID

PGSC0003DMP400038099
PEP Infomation

pacid=37450124 transcript=PGSC0003DMT400056654 locus=PGSC0003DMG400022031 ID=PGSC0003DMT400056654.v4.03 annot-version=v4.03
Sequence

MDHEQPSDVCDLMPCKLKWSQLTSIDDSWVFWSTKQNDELDYQQSIIKSINSYSVVSICP
TEKSRIQSVMEKMSTSNISLFQFWAPIKVNGSTFLSTADQPFVFYKKLDKRLSSYRKLCL
DTLIPIDNEIPFGPPARVFSKLLPEYNPDVSSYSPAEFPLPQTAIPLDSYCAFPVFNIHD
QQCLGVFEIVSTLPDFRRLNIIKGLNFEPVGFYIPYSINKLFEPPEPLFCDIKDGISRIR
KDRRIPFAQIWIPFSQSASSKVLYRAAASTYEYFSLMYHEFEYASKVYFIKSGEALVGRA
FASQGSCFCKDVTLLSIEEYPLVPGARKARFTQSFAICLQSRCSPNIVCVVEYFLPRRKM
AVRDTKTFLNMLLTTMKEQLPGFTVASGNELGQRMLVEVVKVSPSDELDSFEIGQTLPSV
QALQDGGETTEIDSFCQQSNLQNRENNVAAALLVPSCSSDKRDSLNCEGTVEVDPSLPHP
IEEAVTNRGTVNMDVAHDDHIEDTTEIMQLDSHFEQPNLETNSSGNATTNNEIIHSHKKN
AIQRIEKDHGITCKILEQHYGMTLEGTATDFSASEMIYA*

Transcript Sequence

Transcript ID

PGSC0003DMT400056654
Transcript Infomation

pacid=37450124 locus=PGSC0003DMG400022031 ID=PGSC0003DMT400056654.v4.03 annot-version=v4.03
Sequence

ATGGACCATGAGCAACCTTCAGATGTATGTGACCTAATGCCTTGTAAATTGAAGTGGTCT
CAACTGACGTCCATTGACGATTCCTGGGTATTTTGGAGCACAAAACAGAACGACGAGTTG
GACTACCAGCAATCCATTATTAAGTCCATCAATTCTTATTCTGTCGTTTCCATCTGTCCA
ACTGAGAAATCGAGGATCCAATCTGTTATGGAGAAAATGTCGACTTCAAATATTTCTCTG
TTTCAATTCTGGGCACCCATCAAGGTCAATGGATCTACTTTCCTGTCCACTGCGGATCAA
CCATTTGTTTTCTATAAGAAACTTGATAAGAGGCTCTCTTCATACAGGAAGCTCTGTTTA
GATACTTTGATTCCCATTGACAACGAAATTCCATTTGGTCCCCCTGCACGAGTTTTCTCA
AAACTCTTGCCAGAATATAACCCTGACGTCTCAAGCTACTCCCCTGCAGAGTTTCCACTG
CCTCAAACTGCAATTCCCTTGGATTCTTATTGTGCATTTCCAGTGTTCAACATTCATGAT
CAGCAGTGCCTTGGTGTATTTGAGATTGTATCTACACTACCAGATTTCCGTCGTCTCAAC
ATTATTAAGGGGTTGAATTTCGAACCAGTTGGGTTCTACATTCCTTACTCAATAAACAAA
CTTTTTGAACCTCCAGAGCCGCTGTTTTGTGATATAAAGGACGGGATATCTAGGATCCGT
AAAGATAGGCGGATTCCCTTTGCACAAATTTGGATTCCTTTTTCCCAATCTGCCTCTTCG
AAAGTCTTGTATCGTGCTGCTGCCTCCACATATGAATATTTCAGTTTAATGTATCATGAA
TTTGAATATGCTTCTAAGGTCTATTTTATTAAGAGCGGTGAGGCATTGGTGGGGAGGGCA
TTTGCATCCCAAGGTTCATGCTTTTGCAAAGATGTTACTCTATTAAGCATCGAAGAGTAC
CCTTTGGTGCCTGGTGCACGAAAAGCTAGATTCACTCAGAGTTTTGCAATTTGTTTGCAA
AGTAGATGCTCCCCCAATATTGTTTGCGTAGTTGAGTACTTTCTGCCACGACGCAAAATG
GCTGTTAGAGATACAAAGACTTTCTTAAACATGCTTTTAACCACAATGAAAGAACAACTT
CCAGGTTTCACAGTTGCTTCTGGAAATGAACTAGGGCAGAGGATGCTTGTTGAAGTTGTT
AAAGTTTCCCCGAGTGATGAACTTGACTCCTTTGAAATTGGCCAAACTCTGCCGAGTGTT
CAAGCACTTCAGGATGGAGGAGAAACAACAGAAATTGATTCTTTCTGTCAACAGTCAAAT
TTACAGAACAGGGAGAATAATGTTGCTGCTGCACTACTAGTTCCTTCTTGTTCATCAGAC
AAGCGTGACTCACTCAACTGTGAAGGGACAGTGGAAGTTGATCCGTCACTGCCTCATCCA
ATAGAGGAAGCTGTGACAAACAGAGGAACCGTTAACATGGATGTAGCACATGATGACCAC
ATTGAGGATACAACTGAAATAATGCAACTTGATTCACACTTTGAGCAACCAAATTTAGAG
ACTAATTCTTCAGGAAATGCAACAACTAACAACGAGATAATTCATTCGCATAAGAAAAAC
GCAATACAAAGGATAGAAAAAGATCATGGGATTACTTGCAAGATTCTGGAGCAGCATTAT
GGCATGACTCTTGAAGGTACTGCGACAGATTTTAGCGCATCTGAAATGATTTATGCATAG