Plant GARDEN
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TOP > About the Species(Solanum tuberosum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400056560
CDS Infomation

pacid=37450763 polypeptide=PGSC0003DMP400038055 locus=PGSC0003DMG402021989 ID=PGSC0003DMT400056560.v4.03 annot-version=v4.03
Sequence

ATGGCTCCAAAAAAGAAAAAGAAACAGAGCAATAACGCTGCTGAATCTAGTTCTAAAAGT
ACAGTTGCTGAAAAAAAAACTCCCCAAGCACTGAAGGGTAAACGTAAACTTGTAAAAAAG
TTCTCTCACATAAACTCTGCACAATCCAAAGAAGCTGAGATTAGTTCACAAATGCAAGCC
AGAAACAAACACAAGAAGGCAAAAAATGGCAACAAAGGAAATCATGTTGGTGAAAAAGAT
GCTAGCAAGTCTGAAAATATTAATAAAGGAAACAATGAACTGGATATGAGTGAAAGATGT
GGAGAGATGAGTAAGTATGAAAAAACTCAAAAGAGCCTTGATCTAAATGAAGGACGGGGA
GAGGTAAATAAGGATGCAAAAACTTTGAATAGTCTTGGTGGAGTAATTTTCATGTGCAAT
GCCAGAACGAAAGAAGATTGTTTCAGATATCGTGTGATGGGTGTTTCGGCAAGCAAACAA
CACTTTGTAATGGGAATCAAACCTGGTCTTAAGCTTTTCCTCTTTGATTTCGATCTTAAG
CTCATGTATGGTATCTATGAGGCATCTTCTGCTGGTGGAATGAGACTTCAACCAGCAGCA
TTCGGTGGGGCGTTCCCTGCTCAGGTACCTTTTAGGATTCACAAGGACTGTATTCCACTA
CCAGAGAATGTGTTCAAGAAAGCAATTAAAGACAATTATGATGAAAAGACACGCAAGTTT
AAGACTGAGCTGACTGTTATGCAGGTGGAGAAGTTAACAGAGCTGTTTAGACCTGCACTA
TGTATGGATCCAACTCTCAAACCAGTACTACAGGATGCTGTGGCTCAGCCAGTTATTCAG
CGCTCAGCAGCACCACCTTTATCTGGCTATGAACCTGTCAGGGAGCATGTATATGGAGCT
CAATACGGCAGTAGTAAAGCAGGTCAGAATTTCTCACCACGTGATCATGGAAGGCAGCAG
TTTGTGGACCATCATGTCATGCCTAGAGAGGTTGCCCGTAATCCGCATTTTCTTACTGAG
AAAGAATACAGAAGCTATGGTCTTCAACAGGCAAAACATCTGCATCCCTGTACTTCTGCA
GTACATGTGACCCACAAATTGGATCATTATGGATCAAAACAAGGAATACAGCAGCTACTG
AGGGCCCCTGCTGGTGTGAGAAGTGATGCAGCTTTTGCACGGAATGAACATGTTTACTCT
GATGCTCGTTTTCCAAATGAAAGGGAATACCGTAGTTACGGCCTCAATAGTCTCCATGGG
AGACCTGGTACTGTTACTCCTGCTGCAGAAAGTAGTAATACAATGTCTGCAGCTGCCAAT
CATAGTTTACTAAAAAATGTAAATCCTTACGACGAGGATACCACCTCACTTGTGAACCGG
TATCTTTCTCTTCCACGGACAATGATAACACCTGGAGAGTTGCCTTTGACAGGCAGAGAG
TCATTTGCTAGTGCTTCCAACTATGTGAGTGACATCAGAGGCCAGCCAGGAAGATTGTCT
GCTGAAAATGTAAGATTTTATGCACCAATTACTCCTTATGCACTATCAGGTTATGGCCAC
ATATATCAGCATCCTAGAGATGAGCCTGGAAGATCATCGTCAGTCTTACCTCAGTATCCT
TTTGCTGGCCCACCTGCATCACGTCGCTGA

Peptide Sequence

PEP ID

PGSC0003DMP400038055
PEP Infomation

pacid=37450763 transcript=PGSC0003DMT400056560 locus=PGSC0003DMG402021989 ID=PGSC0003DMT400056560.v4.03 annot-version=v4.03
Sequence

MAPKKKKKQSNNAAESSSKSTVAEKKTPQALKGKRKLVKKFSHINSAQSKEAEISSQMQA
RNKHKKAKNGNKGNHVGEKDASKSENINKGNNELDMSERCGEMSKYEKTQKSLDLNEGRG
EVNKDAKTLNSLGGVIFMCNARTKEDCFRYRVMGVSASKQHFVMGIKPGLKLFLFDFDLK
LMYGIYEASSAGGMRLQPAAFGGAFPAQVPFRIHKDCIPLPENVFKKAIKDNYDEKTRKF
KTELTVMQVEKLTELFRPALCMDPTLKPVLQDAVAQPVIQRSAAPPLSGYEPVREHVYGA
QYGSSKAGQNFSPRDHGRQQFVDHHVMPREVARNPHFLTEKEYRSYGLQQAKHLHPCTSA
VHVTHKLDHYGSKQGIQQLLRAPAGVRSDAAFARNEHVYSDARFPNEREYRSYGLNSLHG
RPGTVTPAAESSNTMSAAANHSLLKNVNPYDEDTTSLVNRYLSLPRTMITPGELPLTGRE
SFASASNYVSDIRGQPGRLSAENVRFYAPITPYALSGYGHIYQHPRDEPGRSSSVLPQYP
FAGPPASRR*

Transcript Sequence

Transcript ID

PGSC0003DMT400056560
Transcript Infomation

pacid=37450763 locus=PGSC0003DMG402021989 ID=PGSC0003DMT400056560.v4.03 annot-version=v4.03
Sequence

ATGGCTCCAAAAAAGAAAAAGAAACAGAGCAATAACGCTGCTGAATCTAGTTCTAAAAGT
ACAGTTGCTGAAAAAAAAACTCCCCAAGCACTGAAGGGTAAACGTAAACTTGTAAAAAAG
TTCTCTCACATAAACTCTGCACAATCCAAAGAAGCTGAGATTAGTTCACAAATGCAAGCC
AGAAACAAACACAAGAAGGCAAAAAATGGCAACAAAGGAAATCATGTTGGTGAAAAAGAT
GCTAGCAAGTCTGAAAATATTAATAAAGGAAACAATGAACTGGATATGAGTGAAAGATGT
GGAGAGATGAGTAAGTATGAAAAAACTCAAAAGAGCCTTGATCTAAATGAAGGACGGGGA
GAGGTAAATAAGGATGCAAAAACTTTGAATAGTCTTGGTGGAGTAATTTTCATGTGCAAT
GCCAGAACGAAAGAAGATTGTTTCAGATATCGTGTGATGGGTGTTTCGGCAAGCAAACAA
CACTTTGTAATGGGAATCAAACCTGGTCTTAAGCTTTTCCTCTTTGATTTCGATCTTAAG
CTCATGTATGGTATCTATGAGGCATCTTCTGCTGGTGGAATGAGACTTCAACCAGCAGCA
TTCGGTGGGGCGTTCCCTGCTCAGGTACCTTTTAGGATTCACAAGGACTGTATTCCACTA
CCAGAGAATGTGTTCAAGAAAGCAATTAAAGACAATTATGATGAAAAGACACGCAAGTTT
AAGACTGAGCTGACTGTTATGCAGGTGGAGAAGTTAACAGAGCTGTTTAGACCTGCACTA
TGTATGGATCCAACTCTCAAACCAGTACTACAGGATGCTGTGGCTCAGCCAGTTATTCAG
CGCTCAGCAGCACCACCTTTATCTGGCTATGAACCTGTCAGGGAGCATGTATATGGAGCT
CAATACGGCAGTAGTAAAGCAGGTCAGAATTTCTCACCACGTGATCATGGAAGGCAGCAG
TTTGTGGACCATCATGTCATGCCTAGAGAGGTTGCCCGTAATCCGCATTTTCTTACTGAG
AAAGAATACAGAAGCTATGGTCTTCAACAGGCAAAACATCTGCATCCCTGTACTTCTGCA
GTACATGTGACCCACAAATTGGATCATTATGGATCAAAACAAGGAATACAGCAGCTACTG
AGGGCCCCTGCTGGTGTGAGAAGTGATGCAGCTTTTGCACGGAATGAACATGTTTACTCT
GATGCTCGTTTTCCAAATGAAAGGGAATACCGTAGTTACGGCCTCAATAGTCTCCATGGG
AGACCTGGTACTGTTACTCCTGCTGCAGAAAGTAGTAATACAATGTCTGCAGCTGCCAAT
CATAGTTTACTAAAAAATGTAAATCCTTACGACGAGGATACCACCTCACTTGTGAACCGG
TATCTTTCTCTTCCACGGACAATGATAACACCTGGAGAGTTGCCTTTGACAGGCAGAGAG
TCATTTGCTAGTGCTTCCAACTATGTGAGTGACATCAGAGGCCAGCCAGGAAGATTGTCT
GCTGAAAATGTAAGATTTTATGCACCAATTACTCCTTATGCACTATCAGGTTATGGCCAC
ATATATCAGCATCCTAGAGATGAGCCTGGAAGATCATCGTCAGTCTTACCTCAGTATCCT
TTTGCTGGCCCACCTGCATCACGTCGCTGA