Plant GARDEN
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TOP > About the Species(Solanum tuberosum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400056509
CDS Infomation

pacid=37447644 polypeptide=PGSC0003DMP400038017 locus=PGSC0003DMG400021960 ID=PGSC0003DMT400056509.v4.03 annot-version=v4.03
Sequence

ATGGCAGACCTCAAGAGAAAAAGAGGCCGGAAACCTAAAACTGTGGTGGACAACTCCGCC
GACGCCGCTGGTATTTCTTCCAAAGAAGCCCTCGATGACGGCGTACTATCTGCAACCCCT
GTTGAAACTGCCACCACCAACGGTGACCCACAAACTCACCGCCGCGGCCGTGGACGCCCT
AAGAAAGGTGGAAAACATGAAGAAGAAGTAGACAGGGATATTGCGGCCTCGCCAGAGAGA
CGAGGGCATAGGTTTGCTGACCACAACGGCGATATCACCACTGTGTTGAGTGGCGACTTG
AGGCATGGGGCGGAGTTGGCTGCGGTAGCAGCAGCAGCAAAGGCGGCTCCGTCTATGGAT
GCAGTGGTGAAGGTGTTCTGCGTCCATACAGAGCCTAATTTCTCGCTTCCTTGGCAGAGG
AAGAGACAATATAGCTCCAGTAGTAGTGGGTTTATCATTGGTGGAAGGAGGGTGCTCACG
AATGCCCACTCCGTGGAACACCATACTCAGGTTAAACTCAAGAAACGTGGTTCTGATACC
AAATACTTGGCTACCGTACTTTCCATTGGAACGGAATGCGATATTGCAATGTTAACTGTG
AATGATGATGAGTTCTGGGAAGGAGTATCACCTCTTGAATTTGGGGATCTGCCTGCACTG
CAAGATGCTGTAACTGTTGTTGGATACCCTATAGGAGGAGATACAATCTCTGTGACTAGC
GGTGTTGTCTCGCGCATCGAGATACTATCTTATGTTCATGTGTCAACCGAGCTCCTTGGA
TTGCAGATAGATGCTGCCATCAATTCTGGAAATTCTGGTGGACCTGCATTTAATGATAAG
GGGAAGTGTGTCGGTATTGCATTTCAATCCCTTAAACATGAAGATGCCGAGAACATTGGT
TATGTCATACCAACACCAGTAATTATGCATTTCATTCAAGATTATGAGAAGAATGGAGCA
TACACAGGATTTCCTATCATTGGGATTGAATGGCAAAAAATGGAAAATCCTGACCTCCGC
TTGTCGGTGGGTATGGCGCATAATCAGAAGGGTGTTCGTATCCGAAGAGTTGAGCCTACG
GCCCCAGAATCCAATGTTCTAAAGCCTTCAGATGTTATCCTTAGTTTTGACGGGGTTGAT
ATAGCCAATGATGGAACAGTACCATTCAGGCATGGAGAGCGTATTGGTTTCAGCTATCTT
GTTTCTCAAAAATATACTGGGGATGATGCTCAAGTGAAAGTTCTCCGCAAATCTAAGATT
CTAGAATTTAAGATAAAGCTTAATGCACACAAACGATTGATTCCAGCTCATATCAAAGGA
AAACCTCCTTCTTACTACATTGTCGGTGGTTTTGTTTTCTCTGCTGTTTCTGTTCCATAT
TTACGTTCCGAGTATGGAAAAGATTATGAGTTTGATGCTCCGGTTAAGTTGTTGGACAAA
CTTCTACACGCAATGGCACAATCAATTGATGAACAACTGGTTGTGGTTTCTCAGGTGCTT
GTGGCTGACATCAATATTGGTTATGAAGAACTGGTAAACACTCAGGTTATTGCTTTCAAC
GGCAAGCCTGTAAAAAATCTGAAGAGCTTGGCTAACATGGTGGAGGCCTGTAAAGAAGAG
TACTTGAAGTTTGATCTTGATTATAATCAGATTGTTGTACTGCAGACTAAAAATGCAAAA
GCGGCAACGTCTGATATTCTTGCAATGCATTGTATACCTTCAGCCATGTCTGATGACCTG
AAGACATGA

Peptide Sequence

PEP ID

PGSC0003DMP400038017
PEP Infomation

pacid=37447644 transcript=PGSC0003DMT400056509 locus=PGSC0003DMG400021960 ID=PGSC0003DMT400056509.v4.03 annot-version=v4.03
Sequence

MADLKRKRGRKPKTVVDNSADAAGISSKEALDDGVLSATPVETATTNGDPQTHRRGRGRP
KKGGKHEEEVDRDIAASPERRGHRFADHNGDITTVLSGDLRHGAELAAVAAAAKAAPSMD
AVVKVFCVHTEPNFSLPWQRKRQYSSSSSGFIIGGRRVLTNAHSVEHHTQVKLKKRGSDT
KYLATVLSIGTECDIAMLTVNDDEFWEGVSPLEFGDLPALQDAVTVVGYPIGGDTISVTS
GVVSRIEILSYVHVSTELLGLQIDAAINSGNSGGPAFNDKGKCVGIAFQSLKHEDAENIG
YVIPTPVIMHFIQDYEKNGAYTGFPIIGIEWQKMENPDLRLSVGMAHNQKGVRIRRVEPT
APESNVLKPSDVILSFDGVDIANDGTVPFRHGERIGFSYLVSQKYTGDDAQVKVLRKSKI
LEFKIKLNAHKRLIPAHIKGKPPSYYIVGGFVFSAVSVPYLRSEYGKDYEFDAPVKLLDK
LLHAMAQSIDEQLVVVSQVLVADINIGYEELVNTQVIAFNGKPVKNLKSLANMVEACKEE
YLKFDLDYNQIVVLQTKNAKAATSDILAMHCIPSAMSDDLKT*

Transcript Sequence

Transcript ID

PGSC0003DMT400056509
Transcript Infomation

pacid=37447644 locus=PGSC0003DMG400021960 ID=PGSC0003DMT400056509.v4.03 annot-version=v4.03
Sequence

ATGGCAGACCTCAAGAGAAAAAGAGGCCGGAAACCTAAAACTGTGGTGGACAACTCCGCC
GACGCCGCTGGTATTTCTTCCAAAGAAGCCCTCGATGACGGCGTACTATCTGCAACCCCT
GTTGAAACTGCCACCACCAACGGTGACCCACAAACTCACCGCCGCGGCCGTGGACGCCCT
AAGAAAGGTGGAAAACATGAAGAAGAAGTAGACAGGGATATTGCGGCCTCGCCAGAGAGA
CGAGGGCATAGGTTTGCTGACCACAACGGCGATATCACCACTGTGTTGAGTGGCGACTTG
AGGCATGGGGCGGAGTTGGCTGCGGTAGCAGCAGCAGCAAAGGCGGCTCCGTCTATGGAT
GCAGTGGTGAAGGTGTTCTGCGTCCATACAGAGCCTAATTTCTCGCTTCCTTGGCAGAGG
AAGAGACAATATAGCTCCAGTAGTAGTGGGTTTATCATTGGTGGAAGGAGGGTGCTCACG
AATGCCCACTCCGTGGAACACCATACTCAGGTTAAACTCAAGAAACGTGGTTCTGATACC
AAATACTTGGCTACCGTACTTTCCATTGGAACGGAATGCGATATTGCAATGTTAACTGTG
AATGATGATGAGTTCTGGGAAGGAGTATCACCTCTTGAATTTGGGGATCTGCCTGCACTG
CAAGATGCTGTAACTGTTGTTGGATACCCTATAGGAGGAGATACAATCTCTGTGACTAGC
GGTGTTGTCTCGCGCATCGAGATACTATCTTATGTTCATGTGTCAACCGAGCTCCTTGGA
TTGCAGATAGATGCTGCCATCAATTCTGGAAATTCTGGTGGACCTGCATTTAATGATAAG
GGGAAGTGTGTCGGTATTGCATTTCAATCCCTTAAACATGAAGATGCCGAGAACATTGGT
TATGTCATACCAACACCAGTAATTATGCATTTCATTCAAGATTATGAGAAGAATGGAGCA
TACACAGGATTTCCTATCATTGGGATTGAATGGCAAAAAATGGAAAATCCTGACCTCCGC
TTGTCGGTGGGTATGGCGCATAATCAGAAGGGTGTTCGTATCCGAAGAGTTGAGCCTACG
GCCCCAGAATCCAATGTTCTAAAGCCTTCAGATGTTATCCTTAGTTTTGACGGGGTTGAT
ATAGCCAATGATGGAACAGTACCATTCAGGCATGGAGAGCGTATTGGTTTCAGCTATCTT
GTTTCTCAAAAATATACTGGGGATGATGCTCAAGTGAAAGTTCTCCGCAAATCTAAGATT
CTAGAATTTAAGATAAAGCTTAATGCACACAAACGATTGATTCCAGCTCATATCAAAGGA
AAACCTCCTTCTTACTACATTGTCGGTGGTTTTGTTTTCTCTGCTGTTTCTGTTCCATAT
TTACGTTCCGAGTATGGAAAAGATTATGAGTTTGATGCTCCGGTTAAGTTGTTGGACAAA
CTTCTACACGCAATGGCACAATCAATTGATGAACAACTGGTTGTGGTTTCTCAGGTGCTT
GTGGCTGACATCAATATTGGTTATGAAGAACTGGTAAACACTCAGGTTATTGCTTTCAAC
GGCAAGCCTGTAAAAAATCTGAAGAGCTTGGCTAACATGGTGGAGGCCTGTAAAGAAGAG
TACTTGAAGTTTGATCTTGATTATAATCAGATTGTTGTACTGCAGACTAAAAATGCAAAA
GCGGCAACGTCTGATATTCTTGCAATGCATTGTATACCTTCAGCCATGTCTGATGACCTG
AAGACATGA