Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400056487
CDS Infomation

pacid=37477752 polypeptide=PGSC0003DMP400038006 locus=PGSC0003DMG400021948 ID=PGSC0003DMT400056487.v4.03 annot-version=v4.03
Sequence

ATGGAATTCTTATCTATTTTTGTGGAAAAGGTAACGGACTGCTTGATGCAGCCAGTTGGG
CGAGGGATTGGGTATTTAGTTTACTACAAGAGCAACATCAGATGTATGGATAAAGAATGT
GAGAAGCTGAAGAATATCAAAAGTGAGGTGCAGGAAAGAGCGGATGTTGCCCGGAGAAAC
TTACAACGCATTTCACACAATGGTGAAGCTTGGTTAACTAGTGTTGATACCACTACTCAA
CGTGTGGAATTTGTAAGGCAAGGTAGAGCTGAGGTTGAAAGGGGTTGCTTTTATGGTTGG
TGTCCAAACTTGAAGTCACATTACTCCGTGAGCAGGAGAGCTAAGAAAATTGCACTGGAG
TTGATTCAACTTCAAACTGAAGGCACCAATCCAAATGCTTTCTCCTTTGATCGTCCAGTT
CAAAGTGAGGCTATACCTAGTAACTATGGTGAGGTGTTTGACTCTAGAAAATTGCAAGAG
GATGAGGTCATGGCAGCTTTGAAAGATGACGGGGTCACTATGATTGGGATATGTGGTATG
GGTGGTGTTGGTAAAACAACACTGGCTGAAAAAATCAGACTAAAGGCGAAACAAGAAAGG
ATGTTCAATGATGTTGTCATGGTAATTGTCAGTCAACAACAAGACCCTAAAAGAATTCAG
GGTGAGATCGCAAGAGGAGTCGGACTGACATTAGAAGGGGATGATATGTTGAGTCGTGGA
GATCGGCTGTGTACAAGGTTAATGGATCAGAACAGCCCCATCCTTATAATCATGGATGAT
GTTTGGAAGGCTCTTGATATAAAGAGACTTGGAATTCCAAGTGGAAGCAACCACAAACAT
CAATGCAAAGTGATATTCACAACGCGTTTCCATTCTGTTTGTGAAGCAATGGGAGCTCAG
AAGATCATGGAAGTTGGAATGTTATCTGAAGAGGAAGCTTGGATCCTTTTCAAGCAGAAA
GTCGGTAATTTTGTCGACAATCCTTCTCTTCTTGGCATTGCAAAAAAGGTTGCCAAAGAA
TGCAAGGGGCTGCCACTTGCAATTATTACAGTTGCAGGAGCACTAAAAAAGCTTAAAACC
AAGCCTTCGTGGGACTGTGCCCTTGAACAATTACGAAGTGCAGAAACAAGAATAATTCCT
GAAGTGCCCAAAGAGTTGTATAAACCTCTAAGGCTAAGCTATGATTTCTTGGAAAGTAAT
GAAGCCAAGAACCTCTTTTTGCTTTGTTCCTTGTTCGAGGAAGATAGTGATATCTGTCCT
GAAGAATTACTAAGATACGGAAGGGGGCTTCGCATCTTTTCAGAAATCGGAAAGTTAGAA
CATGCAAGAAATACGGTCTGTCTTGTGTTAGAAACATTGAAAGATTGTTTCTTGTTATCC
CAAGGTTCAGACAAAAACTATGTCAAAATGCATGATGTGGTCCGTGATGTGGCTATAAGT
ATCGCGTCTGAGGGAGAGCATAATTTTATGGTAAGTCACCAATTTAACTCAAACGAGTTC
CCAAGAAGAACTTCTTATGAGCATTTCACTCACATGTCAATAGTTGCAAATAACTTTGAT
GAGCATCCTAGACCAATATTTTGCCCAAAACTGATGCTTTTAATGTTGAAACTCTGGTTT
GAAGATTCATTCAAATTAGAGGACGATTTTTTTGATGGAATGGATAAACTCAATGTCTTC
AGCCTGTGTGGATATAGGCAGCACTGCATTCAGCCTTTGCCAGAACCCATTCAGAGGTTG
TCAAGTTTGAGGACGTTGTGTCTGAGTAATCTAAGGTTGCATGATATATCCATTATTGGG
GAACTTGTCACTTTAGAAATTCTCAGCATAAGAAATTCTCAGTTGAGGAAGGTGCCAGTG
GAGATTGGAAAATTAACCAATCTAATTATGTTGGAGTTGCGGAATGAGGGTATAGCAATT
GAAAGTATTTCAGCAGGTGTCTTATCAAGGCTAGTTCAATTGGAGGAACTACATATATTT
GTAGTAGAATGTTGTAGTTACTCCACCTTGAGTGAACTAGAATCCTTATCGAGATTGACC
GCACTGACATTAAGTAAATGTGCCGAAGATGTCATCTACAGTAACTTGGGCCTTTCCTCC
AAGTTGACACGGTACAATCTTACAGCGGGTGTCAGGTGGACTACTTCAATCATGGATGAA
TACGATTACGATAGGAATATTACTTTAGAGGTCACGAAGACCAGCCCATTGGGTAATTGG
ATCTGCCACCTGTTGAAGGAGAGTGAATTTATACATTCAACTGGAAAGGGCTCTAATAAT
GTGTTGACTGAGTTGCAACTGAATAAACTTCAGAATGTGAAATGTCTCCACCTCGCTAGA
TGTGATTTAGTGACACATTTATTGAAGATCTCTGAGAGGACACATGAAATAATTGAGTTC
CCCAATTTATATAAGTTGGAGCTTCAATATTTGGAATGCCTGACTCACTTTTGCAGTGAC
ACTGTTGAGGCCATTGAGTTCCCTCAGTTACGGAAAATGATCTTTGATGGGTTACCTAAT
TTCCAAAATTTCTGGCCTACAACTAACAACTCCATCACTAACTCAAATCCTCTTTTTCAT
GAAAAGGTTTCTTGTCTTAACCTCAAAGAGCTAGACATCGATAGTTCTAACATAAGTGCT
CTATGCTCTCACCAACTTCCAACTGCCTACTTCAGCAAACTTGAAAGATTGGAAGTAAAG
AATTGTAGAAAATTGAGAAACTTGATGTCTCCATCAGTGACCAGAGGTGCTCGGAATTTA
CGAATACTATTGATAGAAAATTGTGTGTCAATGGAAGAAGTGATCACAGAAGAGGAACAA
CAAGGAGAAGAAATCATGACTAATGAGCCCTTATTTCCCCTGTTGGAAGAGCTGCAGCTT
GAAGGACTGCCTAAGCTGGGGCATTTCTTTCTGACAAAGCATGCTCTTGAATTTCCATTT
CTCAGAAAAGTGACGATTGGTGACTGCCCTGAAATGAAGACGTTTGTCCAACAGGGAGTA
TCTGTGAGTACACCGAGTCTTGAATGGGTGAACTATGATGACAGGGTGGAAGTAGATGAT
CTGAATGAATGGATGCAACAGAGGTTCAATTCTAAGGAACAAAATACTAGTGAAGGCACT
ACCGACAGCAACGATTCTGAAGCTACTGTTGGCGACAAAATACTAGTGAAGCTACTGATG
TCTATGAATCCAAAGATAGCTAGGAATAGTCCATGTTAG

Peptide Sequence

PEP ID

PGSC0003DMP400038006
PEP Infomation

pacid=37477752 transcript=PGSC0003DMT400056487 locus=PGSC0003DMG400021948 ID=PGSC0003DMT400056487.v4.03 annot-version=v4.03
Sequence

MEFLSIFVEKVTDCLMQPVGRGIGYLVYYKSNIRCMDKECEKLKNIKSEVQERADVARRN
LQRISHNGEAWLTSVDTTTQRVEFVRQGRAEVERGCFYGWCPNLKSHYSVSRRAKKIALE
LIQLQTEGTNPNAFSFDRPVQSEAIPSNYGEVFDSRKLQEDEVMAALKDDGVTMIGICGM
GGVGKTTLAEKIRLKAKQERMFNDVVMVIVSQQQDPKRIQGEIARGVGLTLEGDDMLSRG
DRLCTRLMDQNSPILIIMDDVWKALDIKRLGIPSGSNHKHQCKVIFTTRFHSVCEAMGAQ
KIMEVGMLSEEEAWILFKQKVGNFVDNPSLLGIAKKVAKECKGLPLAIITVAGALKKLKT
KPSWDCALEQLRSAETRIIPEVPKELYKPLRLSYDFLESNEAKNLFLLCSLFEEDSDICP
EELLRYGRGLRIFSEIGKLEHARNTVCLVLETLKDCFLLSQGSDKNYVKMHDVVRDVAIS
IASEGEHNFMVSHQFNSNEFPRRTSYEHFTHMSIVANNFDEHPRPIFCPKLMLLMLKLWF
EDSFKLEDDFFDGMDKLNVFSLCGYRQHCIQPLPEPIQRLSSLRTLCLSNLRLHDISIIG
ELVTLEILSIRNSQLRKVPVEIGKLTNLIMLELRNEGIAIESISAGVLSRLVQLEELHIF
VVECCSYSTLSELESLSRLTALTLSKCAEDVIYSNLGLSSKLTRYNLTAGVRWTTSIMDE
YDYDRNITLEVTKTSPLGNWICHLLKESEFIHSTGKGSNNVLTELQLNKLQNVKCLHLAR
CDLVTHLLKISERTHEIIEFPNLYKLELQYLECLTHFCSDTVEAIEFPQLRKMIFDGLPN
FQNFWPTTNNSITNSNPLFHEKVSCLNLKELDIDSSNISALCSHQLPTAYFSKLERLEVK
NCRKLRNLMSPSVTRGARNLRILLIENCVSMEEVITEEEQQGEEIMTNEPLFPLLEELQL
EGLPKLGHFFLTKHALEFPFLRKVTIGDCPEMKTFVQQGVSVSTPSLEWVNYDDRVEVDD
LNEWMQQRFNSKEQNTSEGTTDSNDSEATVGDKILVKLLMSMNPKIARNSPC*

Transcript Sequence

Transcript ID

PGSC0003DMT400056487
Transcript Infomation

pacid=37477752 locus=PGSC0003DMG400021948 ID=PGSC0003DMT400056487.v4.03 annot-version=v4.03
Sequence

ATGGAATTCTTATCTATTTTTGTGGAAAAGGTAACGGACTGCTTGATGCAGCCAGTTGGG
CGAGGGATTGGGTATTTAGTTTACTACAAGAGCAACATCAGATGTATGGATAAAGAATGT
GAGAAGCTGAAGAATATCAAAAGTGAGGTGCAGGAAAGAGCGGATGTTGCCCGGAGAAAC
TTACAACGCATTTCACACAATGGTGAAGCTTGGTTAACTAGTGTTGATACCACTACTCAA
CGTGTGGAATTTGTAAGGCAAGGTAGAGCTGAGGTTGAAAGGGGTTGCTTTTATGGTTGG
TGTCCAAACTTGAAGTCACATTACTCCGTGAGCAGGAGAGCTAAGAAAATTGCACTGGAG
TTGATTCAACTTCAAACTGAAGGCACCAATCCAAATGCTTTCTCCTTTGATCGTCCAGTT
CAAAGTGAGGCTATACCTAGTAACTATGGTGAGGTGTTTGACTCTAGAAAATTGCAAGAG
GATGAGGTCATGGCAGCTTTGAAAGATGACGGGGTCACTATGATTGGGATATGTGGTATG
GGTGGTGTTGGTAAAACAACACTGGCTGAAAAAATCAGACTAAAGGCGAAACAAGAAAGG
ATGTTCAATGATGTTGTCATGGTAATTGTCAGTCAACAACAAGACCCTAAAAGAATTCAG
GGTGAGATCGCAAGAGGAGTCGGACTGACATTAGAAGGGGATGATATGTTGAGTCGTGGA
GATCGGCTGTGTACAAGGTTAATGGATCAGAACAGCCCCATCCTTATAATCATGGATGAT
GTTTGGAAGGCTCTTGATATAAAGAGACTTGGAATTCCAAGTGGAAGCAACCACAAACAT
CAATGCAAAGTGATATTCACAACGCGTTTCCATTCTGTTTGTGAAGCAATGGGAGCTCAG
AAGATCATGGAAGTTGGAATGTTATCTGAAGAGGAAGCTTGGATCCTTTTCAAGCAGAAA
GTCGGTAATTTTGTCGACAATCCTTCTCTTCTTGGCATTGCAAAAAAGGTTGCCAAAGAA
TGCAAGGGGCTGCCACTTGCAATTATTACAGTTGCAGGAGCACTAAAAAAGCTTAAAACC
AAGCCTTCGTGGGACTGTGCCCTTGAACAATTACGAAGTGCAGAAACAAGAATAATTCCT
GAAGTGCCCAAAGAGTTGTATAAACCTCTAAGGCTAAGCTATGATTTCTTGGAAAGTAAT
GAAGCCAAGAACCTCTTTTTGCTTTGTTCCTTGTTCGAGGAAGATAGTGATATCTGTCCT
GAAGAATTACTAAGATACGGAAGGGGGCTTCGCATCTTTTCAGAAATCGGAAAGTTAGAA
CATGCAAGAAATACGGTCTGTCTTGTGTTAGAAACATTGAAAGATTGTTTCTTGTTATCC
CAAGGTTCAGACAAAAACTATGTCAAAATGCATGATGTGGTCCGTGATGTGGCTATAAGT
ATCGCGTCTGAGGGAGAGCATAATTTTATGGTAAGTCACCAATTTAACTCAAACGAGTTC
CCAAGAAGAACTTCTTATGAGCATTTCACTCACATGTCAATAGTTGCAAATAACTTTGAT
GAGCATCCTAGACCAATATTTTGCCCAAAACTGATGCTTTTAATGTTGAAACTCTGGTTT
GAAGATTCATTCAAATTAGAGGACGATTTTTTTGATGGAATGGATAAACTCAATGTCTTC
AGCCTGTGTGGATATAGGCAGCACTGCATTCAGCCTTTGCCAGAACCCATTCAGAGGTTG
TCAAGTTTGAGGACGTTGTGTCTGAGTAATCTAAGGTTGCATGATATATCCATTATTGGG
GAACTTGTCACTTTAGAAATTCTCAGCATAAGAAATTCTCAGTTGAGGAAGGTGCCAGTG
GAGATTGGAAAATTAACCAATCTAATTATGTTGGAGTTGCGGAATGAGGGTATAGCAATT
GAAAGTATTTCAGCAGGTGTCTTATCAAGGCTAGTTCAATTGGAGGAACTACATATATTT
GTAGTAGAATGTTGTAGTTACTCCACCTTGAGTGAACTAGAATCCTTATCGAGATTGACC
GCACTGACATTAAGTAAATGTGCCGAAGATGTCATCTACAGTAACTTGGGCCTTTCCTCC
AAGTTGACACGGTACAATCTTACAGCGGGTGTCAGGTGGACTACTTCAATCATGGATGAA
TACGATTACGATAGGAATATTACTTTAGAGGTCACGAAGACCAGCCCATTGGGTAATTGG
ATCTGCCACCTGTTGAAGGAGAGTGAATTTATACATTCAACTGGAAAGGGCTCTAATAAT
GTGTTGACTGAGTTGCAACTGAATAAACTTCAGAATGTGAAATGTCTCCACCTCGCTAGA
TGTGATTTAGTGACACATTTATTGAAGATCTCTGAGAGGACACATGAAATAATTGAGTTC
CCCAATTTATATAAGTTGGAGCTTCAATATTTGGAATGCCTGACTCACTTTTGCAGTGAC
ACTGTTGAGGCCATTGAGTTCCCTCAGTTACGGAAAATGATCTTTGATGGGTTACCTAAT
TTCCAAAATTTCTGGCCTACAACTAACAACTCCATCACTAACTCAAATCCTCTTTTTCAT
GAAAAGGTTTCTTGTCTTAACCTCAAAGAGCTAGACATCGATAGTTCTAACATAAGTGCT
CTATGCTCTCACCAACTTCCAACTGCCTACTTCAGCAAACTTGAAAGATTGGAAGTAAAG
AATTGTAGAAAATTGAGAAACTTGATGTCTCCATCAGTGACCAGAGGTGCTCGGAATTTA
CGAATACTATTGATAGAAAATTGTGTGTCAATGGAAGAAGTGATCACAGAAGAGGAACAA
CAAGGAGAAGAAATCATGACTAATGAGCCCTTATTTCCCCTGTTGGAAGAGCTGCAGCTT
GAAGGACTGCCTAAGCTGGGGCATTTCTTTCTGACAAAGCATGCTCTTGAATTTCCATTT
CTCAGAAAAGTGACGATTGGTGACTGCCCTGAAATGAAGACGTTTGTCCAACAGGGAGTA
TCTGTGAGTACACCGAGTCTTGAATGGGTGAACTATGATGACAGGGTGGAAGTAGATGAT
CTGAATGAATGGATGCAACAGAGGTTCAATTCTAAGGAACAAAATACTAGTGAAGGCACT
ACCGACAGCAACGATTCTGAAGCTACTGTTGGCGACAAAATACTAGTGAAGCTACTGATG
TCTATGAATCCAAAGATAGCTAGGAATAGTCCATGTTAG