Plant GARDEN
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TOP > About the Species(Solanum tuberosum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400056461
CDS Infomation

pacid=37447285 polypeptide=PGSC0003DMP400037985 locus=PGSC0003DMG400021936 ID=PGSC0003DMT400056461.v4.03 annot-version=v4.03
Sequence

ATGGGAACTGGCGAAGATAGGTCGGAGATAGTGTTTTTCGACGTGGAGACAACTATACCC
ACGCGAACTGGACAGAAATATGCACTCTTGGAATTTGGGGCAATTCTTGTTTGCCCAAGA
AAACTTGTTGAACAACATAGTTACTCTACCCTTGTACGACCCTCTGACCTCTCTCTTATT
TCTACCCTTTCTGTTCGCTGCAATGGAATTACCAGAGATGCTGTCACTTCTGCCCCTTCA
TTTGCTGATATCGCCGATAAAGTCTTTGACGTTCTCCATGGGAGGATATGGGCGGGCCAC
AATATACTGAAATTTGATTGTCCAAGGATTCGGGAGGCGTTTGCTGGAATTAACAGGCTT
GCACCAGAACCTAAGGGAACAATTGATACACTTACTTTGTTGACTGAAAGATTTGGAAGG
AGAGCTGGTAACATGAAGATGGCCTCTCTTGCTACATATTTTGTCCTTGGAGAGCAAACA
CATAGGAGTTTGGATGATGTCCGTATGAATTTCGAAGTACTAAAGCACTGTGCAACTGTC
TTGTTTTTGGAATCCAGCCTGCCTGATATATTAACCAACAACAGTTGGGTGTCTCCTAAT
GCTGCTGTAAGAAGTCGTGCTAATGGAAATACTAATTTGGAGGGGATGGGCTTGAGTATA
GATACACTTTCATCAAGTGTCAAGATAGGAAGTCCTATGAAATCTGTTGCAGAAGCTTAC
ACAGAATCAGACAATCCAATACTTCCGCATGTGAGCAGAAATGTGGAGGAGGTACCAGAT
CTTATTGAAACAAATTCCTCGAGGCCTGACCCTTTTAACTTGGTCCAATTCAGTGCGGAA
GTAAGGGAATTCATTCAGTTAGATGCAATGGAAGAAGAGCCTGCTTCATATTCTCGAGAT
TCTTCTGCGTCAATTGCAACAGAGGGTTACATTGGCTTCACAGACTTCTTAGAACCAAAT
AAAATTTCAATTTCTTCCGTTTCCTTAAGTCTTTCCCCCTTACATCGTGGAATGCAGAAG
ATACAAATCTTGCACAACAATGCTGAGTTGCAAGTTCGCTCTAAATGCCTGAAGGTGCGG
TTTGGAATTAGTACAAAGTTTGTGGATTATGCTGGTCGGCCACGGTTGAGTTTTGTGGTG
GATGCATCATCAGAGTTATGCCAACTTTTGGATGCAATTGATAATCTTACTCAGAAGTTG
ACCGAGGATTCAGGTAGCATGTCAGAATGGAGGCCTGTGGTAAACAGAAAGCCTGGCTTT
ATGAACTGTCCTACCGTTCGTTTAAATTTACCAACTGTTGTAGATGGTAATATCTCCCGC
TGGGTCACAGAGATATACCAGAAAGAGTCTTCCACAACACAGAAGCTTATGTTCAGTAGG
TTTGATGTGACAGAACTGGATTCCTTGATTACTCCAGGGACTGTGTTGGATGCATACTTC
TCAGTGGATTCATATGACTATCAACAGATTGCAGGCATCCGCCTGGTGGCTAAAAAGTTG
ATTGTGCATTCCTCCCTGATAGATAAAGCGACTTGTCGATTGACATAA

Peptide Sequence

PEP ID

PGSC0003DMP400037985
PEP Infomation

pacid=37447285 transcript=PGSC0003DMT400056461 locus=PGSC0003DMG400021936 ID=PGSC0003DMT400056461.v4.03 annot-version=v4.03
Sequence

MGTGEDRSEIVFFDVETTIPTRTGQKYALLEFGAILVCPRKLVEQHSYSTLVRPSDLSLI
STLSVRCNGITRDAVTSAPSFADIADKVFDVLHGRIWAGHNILKFDCPRIREAFAGINRL
APEPKGTIDTLTLLTERFGRRAGNMKMASLATYFVLGEQTHRSLDDVRMNFEVLKHCATV
LFLESSLPDILTNNSWVSPNAAVRSRANGNTNLEGMGLSIDTLSSSVKIGSPMKSVAEAY
TESDNPILPHVSRNVEEVPDLIETNSSRPDPFNLVQFSAEVREFIQLDAMEEEPASYSRD
SSASIATEGYIGFTDFLEPNKISISSVSLSLSPLHRGMQKIQILHNNAELQVRSKCLKVR
FGISTKFVDYAGRPRLSFVVDASSELCQLLDAIDNLTQKLTEDSGSMSEWRPVVNRKPGF
MNCPTVRLNLPTVVDGNISRWVTEIYQKESSTTQKLMFSRFDVTELDSLITPGTVLDAYF
SVDSYDYQQIAGIRLVAKKLIVHSSLIDKATCRLT*

Transcript Sequence

Transcript ID

PGSC0003DMT400056461
Transcript Infomation

pacid=37447285 locus=PGSC0003DMG400021936 ID=PGSC0003DMT400056461.v4.03 annot-version=v4.03
Sequence

ATGGGAACTGGCGAAGATAGGTCGGAGATAGTGTTTTTCGACGTGGAGACAACTATACCC
ACGCGAACTGGACAGAAATATGCACTCTTGGAATTTGGGGCAATTCTTGTTTGCCCAAGA
AAACTTGTTGAACAACATAGTTACTCTACCCTTGTACGACCCTCTGACCTCTCTCTTATT
TCTACCCTTTCTGTTCGCTGCAATGGAATTACCAGAGATGCTGTCACTTCTGCCCCTTCA
TTTGCTGATATCGCCGATAAAGTCTTTGACGTTCTCCATGGGAGGATATGGGCGGGCCAC
AATATACTGAAATTTGATTGTCCAAGGATTCGGGAGGCGTTTGCTGGAATTAACAGGCTT
GCACCAGAACCTAAGGGAACAATTGATACACTTACTTTGTTGACTGAAAGATTTGGAAGG
AGAGCTGGTAACATGAAGATGGCCTCTCTTGCTACATATTTTGTCCTTGGAGAGCAAACA
CATAGGAGTTTGGATGATGTCCGTATGAATTTCGAAGTACTAAAGCACTGTGCAACTGTC
TTGTTTTTGGAATCCAGCCTGCCTGATATATTAACCAACAACAGTTGGGTGTCTCCTAAT
GCTGCTGTAAGAAGTCGTGCTAATGGAAATACTAATTTGGAGGGGATGGGCTTGAGTATA
GATACACTTTCATCAAGTGTCAAGATAGGAAGTCCTATGAAATCTGTTGCAGAAGCTTAC
ACAGAATCAGACAATCCAATACTTCCGCATGTGAGCAGAAATGTGGAGGAGGTACCAGAT
CTTATTGAAACAAATTCCTCGAGGCCTGACCCTTTTAACTTGGTCCAATTCAGTGCGGAA
GTAAGGGAATTCATTCAGTTAGATGCAATGGAAGAAGAGCCTGCTTCATATTCTCGAGAT
TCTTCTGCGTCAATTGCAACAGAGGGTTACATTGGCTTCACAGACTTCTTAGAACCAAAT
AAAATTTCAATTTCTTCCGTTTCCTTAAGTCTTTCCCCCTTACATCGTGGAATGCAGAAG
ATACAAATCTTGCACAACAATGCTGAGTTGCAAGTTCGCTCTAAATGCCTGAAGGTGCGG
TTTGGAATTAGTACAAAGTTTGTGGATTATGCTGGTCGGCCACGGTTGAGTTTTGTGGTG
GATGCATCATCAGAGTTATGCCAACTTTTGGATGCAATTGATAATCTTACTCAGAAGTTG
ACCGAGGATTCAGGTAGCATGTCAGAATGGAGGCCTGTGGTAAACAGAAAGCCTGGCTTT
ATGAACTGTCCTACCGTTCGTTTAAATTTACCAACTGTTGTAGATGGTAATATCTCCCGC
TGGGTCACAGAGATATACCAGAAAGAGTCTTCCACAACACAGAAGCTTATGTTCAGTAGG
TTTGATGTGACAGAACTGGATTCCTTGATTACTCCAGGGACTGTGTTGGATGCATACTTC
TCAGTGGATTCATATGACTATCAACAGATTGCAGGCATCCGCCTGGTGGCTAAAAAGTTG
ATTGTGCATTCCTCCCTGATAGATAAAGCGACTTGTCGATTGACATAA