Plant GARDEN
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TOP > About the Species(Solanum tuberosum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400056412
CDS Infomation

pacid=37478379 polypeptide=PGSC0003DMP400037961 locus=PGSC0003DMG402021921 ID=PGSC0003DMT400056412.v4.03 annot-version=v4.03
Sequence

ATGTTTAGCAAAGAGAATGGGAGACCAGGCATGCCCCTCCAGGTTAATGGAGATCCTTCA
TTTACTAATCTCTTGAACGCCAATCAGCTAAGAAGATTTCCAGTTGCACATGGTCACAAT
GATACCAGACTCCGTATTTTCTCTGGGACTGCCAATCCTGCACTTTCTCAGGAAATTGCT
AGCAACATGGGTTTGGAACTTGGAAAGATAATGATAAAACGTTTTGCTGATGGCGAGATT
TATGTCCAGTTACAAGAGAGCGTTAGGGGTTGTGATGTATATCTTGTCCAACCTACCTGT
CCTCCTGCTAATGAAAATCTGATGGAACTCTTGATAATGATTGATGCTTGTCGTAGGGCC
TCAGCCAAAAATATCACTGCAGTGGTTCCTTACTTTGGGTATGCCCGTGCTGATCGTAAG
ACTCAAGGTCGTGAATCAATTGCCGCCAAACTTGTAGCAAATCTGATAACAGAAGCTGGT
GCAGATCGAGTTCTTGCTTGTGATCTCCATTCTGGCCAGTCAATGGGCTATTTTGACATT
CCAGTGGATCATGTACCTGGCCAGCCTGTCATACTTGACTACCTTGCGAGCAAGACTATC
TGCTCTGATGATCTAGTCGTGGTATCTCCTGATGTTGGGGGGGTTGCAAGGGCAAGAGCT
TTTGCCAAAAAGTTGTCTGATGCACCCCTAGCTATCGTCGATAAAAGGCGTCATGGACAC
AATGTTGCTGAGGTAATGAATTTGATTGGTGATGTTAGGGGAAAAGTGGCAGTTATGGTT
GATGACATGATTGATACGGCTGGTACTATTGCAAAAGGAGCAGCTCTTTTGCATCAAGAA
GGAGCCAGGGAAGTTTATGCATGCACCACTCACGCGGTTTTCAGCCCTCCTGCAATAGAG
AGGTTGTCGAGTGGACTGTTTCAGGAGGTAATCATCACAAATACCATCCCGGTTGCAGAA
CAGAACTATTTCCCCCAGTTGACCATCTTATCTGTGGCAAACCTCTTGGGTGAAACCATT
TGGCGTGTCCACGATGACTGTGCAGGAGGCTTTGAGCCTTACTCAAGTTTGGGCATTGAT
TAG

Peptide Sequence

PEP ID

PGSC0003DMP400037961
PEP Infomation

pacid=37478379 transcript=PGSC0003DMT400056412 locus=PGSC0003DMG402021921 ID=PGSC0003DMT400056412.v4.03 annot-version=v4.03
Sequence

MFSKENGRPGMPLQVNGDPSFTNLLNANQLRRFPVAHGHNDTRLRIFSGTANPALSQEIA
SNMGLELGKIMIKRFADGEIYVQLQESVRGCDVYLVQPTCPPANENLMELLIMIDACRRA
SAKNITAVVPYFGYARADRKTQGRESIAAKLVANLITEAGADRVLACDLHSGQSMGYFDI
PVDHVPGQPVILDYLASKTICSDDLVVVSPDVGGVARARAFAKKLSDAPLAIVDKRRHGH
NVAEVMNLIGDVRGKVAVMVDDMIDTAGTIAKGAALLHQEGAREVYACTTHAVFSPPAIE
RLSSGLFQEVIITNTIPVAEQNYFPQLTILSVANLLGETIWRVHDDCAGGFEPYSSLGID
*

Transcript Sequence

Transcript ID

PGSC0003DMT400056412
Transcript Infomation

pacid=37478379 locus=PGSC0003DMG402021921 ID=PGSC0003DMT400056412.v4.03 annot-version=v4.03
Sequence

ATGTTTAGCAAAGAGAATGGGAGACCAGGCATGCCCCTCCAGGTTAATGGAGATCCTTCA
TTTACTAATCTCTTGAACGCCAATCAGCTAAGAAGATTTCCAGTTGCACATGGTCACAAT
GATACCAGACTCCGTATTTTCTCTGGGACTGCCAATCCTGCACTTTCTCAGGAAATTGCT
AGCAACATGGGTTTGGAACTTGGAAAGATAATGATAAAACGTTTTGCTGATGGCGAGATT
TATGTCCAGTTACAAGAGAGCGTTAGGGGTTGTGATGTATATCTTGTCCAACCTACCTGT
CCTCCTGCTAATGAAAATCTGATGGAACTCTTGATAATGATTGATGCTTGTCGTAGGGCC
TCAGCCAAAAATATCACTGCAGTGGTTCCTTACTTTGGGTATGCCCGTGCTGATCGTAAG
ACTCAAGGTCGTGAATCAATTGCCGCCAAACTTGTAGCAAATCTGATAACAGAAGCTGGT
GCAGATCGAGTTCTTGCTTGTGATCTCCATTCTGGCCAGTCAATGGGCTATTTTGACATT
CCAGTGGATCATGTACCTGGCCAGCCTGTCATACTTGACTACCTTGCGAGCAAGACTATC
TGCTCTGATGATCTAGTCGTGGTATCTCCTGATGTTGGGGGGGTTGCAAGGGCAAGAGCT
TTTGCCAAAAAGTTGTCTGATGCACCCCTAGCTATCGTCGATAAAAGGCGTCATGGACAC
AATGTTGCTGAGGTAATGAATTTGATTGGTGATGTTAGGGGAAAAGTGGCAGTTATGGTT
GATGACATGATTGATACGGCTGGTACTATTGCAAAAGGAGCAGCTCTTTTGCATCAAGAA
GGAGCCAGGGAAGTTTATGCATGCACCACTCACGCGGTTTTCAGCCCTCCTGCAATAGAG
AGGTTGTCGAGTGGACTGTTTCAGGAGGTAATCATCACAAATACCATCCCGGTTGCAGAA
CAGAACTATTTCCCCCAGTTGACCATCTTATCTGTGGCAAACCTCTTGGGTGAAACCATT
TGGCGTGTCCACGATGACTGTGCAGGAGGCTTTGAGCCTTACTCAAGTTTGGGCATTGAT
TAG