Plant GARDEN
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TOP > About the Species(Solanum tuberosum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400056320
CDS Infomation

pacid=37455652 polypeptide=PGSC0003DMP400037895 locus=PGSC0003DMG400021879 ID=PGSC0003DMT400056320.v4.03 annot-version=v4.03
Sequence

ATGAATCTCTTCAAATCGAAACAATCATCATCTTCTCCAGCAGCACCACCACACCTACAG
CTCCAACAAACCTTCAAGAATCTGCAGACCCATTTCACCAATTTCCTTCAAACCACTATT
CCCCAACTCAACACCCTTAATTCTTCTCAAAATTCACCTCTATGGGCTAAAATTGGTGTA
AAAAAGCAATCTTTATCTACTGAAACAATCGAAGAGCGGTTGGGTGGAGTACCTGTGTAT
GCCCTTAGCAATGCTTCTCAAGAATTCGTGTTGGTTTCGGGCGTTAGTACTGGGAAAAGT
TTGGGGTTGTTTTGCTTTAGTGAAGCTGATGCTGAAGCACTTCGTCAGCAGATGGAATCA
ATGGACCCCTCTATGCGAAACGGCTCTCGGGTTGTTCCTGTTGCTCTCAACAAGGTTTTC
CAGCTCAAAGTTGATGGAGTTGCTTTCAGGTTGATACCGGAGGCATCTCAAGTAAAGAAT
GCAATAAAGGAAAGGGAAAGGACTGGAACGACTGATGAGAGCTTTTATGGTGTTCCAGTT
TTTCAGTCGAGGAGCTTAATTCTAAGAAGCCAAAACAAGAGATATCGTCCTGTTTTCTTC
AGGAAGGAGGACCTAGAGAGTTCACTAGTAAGAGCTTCTCAGCAGCAAGGGCGATTGAAT
CCCGCTTTGAAAGGAGATATTCAGGTTGGCGTTCTGGAGGATATAATACAAGGTATGAAG
GATTCTTCGGCATCACAGTGGGACGACGTTGTATTTGTTCCTCCTGGTTTCGATGTTTCA
GCAGACCCCTCCCAGAAGTAA

Peptide Sequence

PEP ID

PGSC0003DMP400037895
PEP Infomation

pacid=37455652 transcript=PGSC0003DMT400056320 locus=PGSC0003DMG400021879 ID=PGSC0003DMT400056320.v4.03 annot-version=v4.03
Sequence

MNLFKSKQSSSSPAAPPHLQLQQTFKNLQTHFTNFLQTTIPQLNTLNSSQNSPLWAKIGV
KKQSLSTETIEERLGGVPVYALSNASQEFVLVSGVSTGKSLGLFCFSEADAEALRQQMES
MDPSMRNGSRVVPVALNKVFQLKVDGVAFRLIPEASQVKNAIKERERTGTTDESFYGVPV
FQSRSLILRSQNKRYRPVFFRKEDLESSLVRASQQQGRLNPALKGDIQVGVLEDIIQGMK
DSSASQWDDVVFVPPGFDVSADPSQK*

Transcript Sequence

Transcript ID

PGSC0003DMT400056320
Transcript Infomation

pacid=37455652 locus=PGSC0003DMG400021879 ID=PGSC0003DMT400056320.v4.03 annot-version=v4.03
Sequence

ATGAATCTCTTCAAATCGAAACAATCATCATCTTCTCCAGCAGCACCACCACACCTACAG
CTCCAACAAACCTTCAAGAATCTGCAGACCCATTTCACCAATTTCCTTCAAACCACTATT
CCCCAACTCAACACCCTTAATTCTTCTCAAAATTCACCTCTATGGGCTAAAATTGGTGTA
AAAAAGCAATCTTTATCTACTGAAACAATCGAAGAGCGGTTGGGTGGAGTACCTGTGTAT
GCCCTTAGCAATGCTTCTCAAGAATTCGTGTTGGTTTCGGGCGTTAGTACTGGGAAAAGT
TTGGGGTTGTTTTGCTTTAGTGAAGCTGATGCTGAAGCACTTCGTCAGCAGATGGAATCA
ATGGACCCCTCTATGCGAAACGGCTCTCGGGTTGTTCCTGTTGCTCTCAACAAGGTTTTC
CAGCTCAAAGTTGATGGAGTTGCTTTCAGGTTGATACCGGAGGCATCTCAAGTAAAGAAT
GCAATAAAGGAAAGGGAAAGGACTGGAACGACTGATGAGAGCTTTTATGGTGTTCCAGTT
TTTCAGTCGAGGAGCTTAATTCTAAGAAGCCAAAACAAGAGATATCGTCCTGTTTTCTTC
AGGAAGGAGGACCTAGAGAGTTCACTAGTAAGAGCTTCTCAGCAGCAAGGGCGATTGAAT
CCCGCTTTGAAAGGAGATATTCAGGTTGGCGTTCTGGAGGATATAATACAAGGTATGAAG
GATTCTTCGGCATCACAGTGGGACGACGTTGTATTTGTTCCTCCTGGTTTCGATGTTTCA
GCAGACCCCTCCCAGAAGTAA