Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400056268
CDS Infomation

pacid=37478980 polypeptide=PGSC0003DMP400037873 locus=PGSC0003DMG400021863 ID=PGSC0003DMT400056268.v4.03 annot-version=v4.03
Sequence

ATGGCTCATGCTGCCGTCATATCTCTTCAACAAAAACTACAGGAACTGCTGAAAGGTGAC
AATTCTCGTTACCCTGCATTACGTCAAGCAGTCAGTTCTTGGCATGCATTTTTGGCAGAC
TCTTTGTCGATTAGAAATGCTCCAGAAGAAGTGGAACATTTGGAAAAGCAGGTTAAATGT
ATGGCAACTGAACTTCTAGGTAGCATCGACTTATATGAATTGAAAAAGAGTACAACTGGC
CATTTCTATCCAAAAAATTGGGAATTGTTCCAGAAAGAGGTAGTGACTGCAGGTTCCGAT
AGCATAAAGGCATATTTGATGAAGGTTATGAATTCTCGAAATGATTATGATGCTCTACTA
ACACGAGATACTGTGGAGAGGGATTCAGAATACAGTCCCCATCTCAAAGCTACTGTGTTA
GACCTTGATAATGACTTAATGACTGTCAAATCTCGGCTTATAGGGCCTCATTCAAAGCTA
GATGTCGTCTCAATTGTTGGCATGGGAGGGATTGGCAAAACGACTCTTGCTAGAAAAGTT
TATGATGATATTTATATGGAGCATCACTTCTACATTCGTGCTTGGATTACTGTATCTCAA
ATGCATCAACTTAGAGAAATGTTGTTGGGCATTTTGCGGTGTTTTTCACTGGTCAATGAT
AACACCTACCTAAAAAGTACTGAGCAATTGGCAGAACAAGTTTACAGAAGTTTAAAAGGA
AGGAGATATCTCATTGCAATGGATGATGTGTGGGACACCACTGCATGGGATGTCGTGAAA
AGATCTTTTCCAGATGATAAAAATGGAAGTCGTGTCATACTTACTAGTCGGCTAGCAAAT
GCTGGTATCTATGCTAGCTCAAGCAGCCCTCCTCATTACATGCGGTGCCTAAGTGTGGAC
CACAGCTTGAAGTTGTTCAACTTAAAGGTGTTTGGAGTGGAGACTTGCCCCCTTGAACTG
GAGAAAGCTACAAAGCAAATTGTCGAGAAATGTCAAGGACTACCACTAGCAATAGTTGTG
GTGGCTGGATTTTGTTCCAAGATCAGCAAGACGGAAAATTGTTGGGAAGACGTAGCACAT
AAAATTGGTATGATTGTGAGTAGGGAAACAGAAGAATGCATGGACTTACTTGCCTTGAGT
TATAAACATTTGCCACATCACTTGAAACCATGCTTTCTATATTTGGGAGCTTTTCCAAAA
GACTTTGAGATTAGTGTTTCAAGACTAATCAAGCTATGGATTGCAGCAGAATTTCTAGAA
CACACATTTGAAATGGACTTCGAAGAAGTTGCTGAGGGATACTTAAAAGATCTTATAGAT
AGAAGTCTAATTATGGTTAAGAAAAGGACCTCAAGTGGCAAAGTCAAAACATGTGAGGTT
CATGATCTGTTTCATGATTTAATCATACGAGAAGCATGGAAGGAGAGATCAATCTACTTT
ACTAAATCAAATGTGATTCTTTCTCCATCAGTGGCATCTTTTGAGCATCGCATCATTTTC
AATTTTCACAGAGTCTCATTGACACGTTTAGAGATCATTTATGATCAACCTTCACTTCCT
CATGCAACTTCCTTTCTTTGTTTTGGAAGAGATGGAACTCCTGGATCCTGTTCTCAGGTT
GATTCGTTTATCACCTCTACTAACTTCACATGGTTAACAGTTTTGGATATATGTTTTCAG
CCATTTGACCATCTACCATGTGAAATATGGCAACTATCTTCATTGAGGTATCTTGCCCTT
GCCAGTTTTACTGTGCTCCCTCCATCAATATGCAATCTTAGGTATCTTCAGACACTAATT
CGTTACAGTCACCAGGCTAGTATTTGTTTGCCGGCAGAGATATGA

Peptide Sequence

PEP ID

PGSC0003DMP400037873
PEP Infomation

pacid=37478980 transcript=PGSC0003DMT400056268 locus=PGSC0003DMG400021863 ID=PGSC0003DMT400056268.v4.03 annot-version=v4.03
Sequence

MAHAAVISLQQKLQELLKGDNSRYPALRQAVSSWHAFLADSLSIRNAPEEVEHLEKQVKC
MATELLGSIDLYELKKSTTGHFYPKNWELFQKEVVTAGSDSIKAYLMKVMNSRNDYDALL
TRDTVERDSEYSPHLKATVLDLDNDLMTVKSRLIGPHSKLDVVSIVGMGGIGKTTLARKV
YDDIYMEHHFYIRAWITVSQMHQLREMLLGILRCFSLVNDNTYLKSTEQLAEQVYRSLKG
RRYLIAMDDVWDTTAWDVVKRSFPDDKNGSRVILTSRLANAGIYASSSSPPHYMRCLSVD
HSLKLFNLKVFGVETCPLELEKATKQIVEKCQGLPLAIVVVAGFCSKISKTENCWEDVAH
KIGMIVSRETEECMDLLALSYKHLPHHLKPCFLYLGAFPKDFEISVSRLIKLWIAAEFLE
HTFEMDFEEVAEGYLKDLIDRSLIMVKKRTSSGKVKTCEVHDLFHDLIIREAWKERSIYF
TKSNVILSPSVASFEHRIIFNFHRVSLTRLEIIYDQPSLPHATSFLCFGRDGTPGSCSQV
DSFITSTNFTWLTVLDICFQPFDHLPCEIWQLSSLRYLALASFTVLPPSICNLRYLQTLI
RYSHQASICLPAEI*

Transcript Sequence

Transcript ID

PGSC0003DMT400056268
Transcript Infomation

pacid=37478980 locus=PGSC0003DMG400021863 ID=PGSC0003DMT400056268.v4.03 annot-version=v4.03
Sequence

ATGGCTCATGCTGCCGTCATATCTCTTCAACAAAAACTACAGGAACTGCTGAAAGGTGAC
AATTCTCGTTACCCTGCATTACGTCAAGCAGTCAGTTCTTGGCATGCATTTTTGGCAGAC
TCTTTGTCGATTAGAAATGCTCCAGAAGAAGTGGAACATTTGGAAAAGCAGGTTAAATGT
ATGGCAACTGAACTTCTAGGTAGCATCGACTTATATGAATTGAAAAAGAGTACAACTGGC
CATTTCTATCCAAAAAATTGGGAATTGTTCCAGAAAGAGGTAGTGACTGCAGGTTCCGAT
AGCATAAAGGCATATTTGATGAAGGTTATGAATTCTCGAAATGATTATGATGCTCTACTA
ACACGAGATACTGTGGAGAGGGATTCAGAATACAGTCCCCATCTCAAAGCTACTGTGTTA
GACCTTGATAATGACTTAATGACTGTCAAATCTCGGCTTATAGGGCCTCATTCAAAGCTA
GATGTCGTCTCAATTGTTGGCATGGGAGGGATTGGCAAAACGACTCTTGCTAGAAAAGTT
TATGATGATATTTATATGGAGCATCACTTCTACATTCGTGCTTGGATTACTGTATCTCAA
ATGCATCAACTTAGAGAAATGTTGTTGGGCATTTTGCGGTGTTTTTCACTGGTCAATGAT
AACACCTACCTAAAAAGTACTGAGCAATTGGCAGAACAAGTTTACAGAAGTTTAAAAGGA
AGGAGATATCTCATTGCAATGGATGATGTGTGGGACACCACTGCATGGGATGTCGTGAAA
AGATCTTTTCCAGATGATAAAAATGGAAGTCGTGTCATACTTACTAGTCGGCTAGCAAAT
GCTGGTATCTATGCTAGCTCAAGCAGCCCTCCTCATTACATGCGGTGCCTAAGTGTGGAC
CACAGCTTGAAGTTGTTCAACTTAAAGGTGTTTGGAGTGGAGACTTGCCCCCTTGAACTG
GAGAAAGCTACAAAGCAAATTGTCGAGAAATGTCAAGGACTACCACTAGCAATAGTTGTG
GTGGCTGGATTTTGTTCCAAGATCAGCAAGACGGAAAATTGTTGGGAAGACGTAGCACAT
AAAATTGGTATGATTGTGAGTAGGGAAACAGAAGAATGCATGGACTTACTTGCCTTGAGT
TATAAACATTTGCCACATCACTTGAAACCATGCTTTCTATATTTGGGAGCTTTTCCAAAA
GACTTTGAGATTAGTGTTTCAAGACTAATCAAGCTATGGATTGCAGCAGAATTTCTAGAA
CACACATTTGAAATGGACTTCGAAGAAGTTGCTGAGGGATACTTAAAAGATCTTATAGAT
AGAAGTCTAATTATGGTTAAGAAAAGGACCTCAAGTGGCAAAGTCAAAACATGTGAGGTT
CATGATCTGTTTCATGATTTAATCATACGAGAAGCATGGAAGGAGAGATCAATCTACTTT
ACTAAATCAAATGTGATTCTTTCTCCATCAGTGGCATCTTTTGAGCATCGCATCATTTTC
AATTTTCACAGAGTCTCATTGACACGTTTAGAGATCATTTATGATCAACCTTCACTTCCT
CATGCAACTTCCTTTCTTTGTTTTGGAAGAGATGGAACTCCTGGATCCTGTTCTCAGGTT
GATTCGTTTATCACCTCTACTAACTTCACATGGTTAACAGTTTTGGATATATGTTTTCAG
CCATTTGACCATCTACCATGTGAAATATGGCAACTATCTTCATTGAGGTATCTTGCCCTT
GCCAGTTTTACTGTGCTCCCTCCATCAATATGCAATCTTAGGTATCTTCAGACACTAATT
CGTTACAGTCACCAGGCTAGTATTTGTTTGCCGGCAGAGATATGA