Plant GARDEN
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TOP > About the Species(Solanum tuberosum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400056218
CDS Infomation

pacid=37435115 polypeptide=PGSC0003DMP400037839 locus=PGSC0003DMG401021841 ID=PGSC0003DMT400056218.v4.03 annot-version=v4.03
Sequence

ATGGTACTAAGAGTGAACATCGACCAAATAGAACCAGCAACACGAGATTGGATTTGCAAA
ATTCAAATTATCGAAATAGGACGGCCACGAGAAAGCCTTGACAAGAAATGTACATTCCAA
AATTTAATTTTGGAAGATGAAGAGCAATGCCAAATTAAAGCCGTTATGTACAGTGACGAA
ATCAAGCAGTATGCAGCTACACTTAAACTCCTGAATACCTACCTGATCTCTACTGCAAAA
GTTAAACTGTCCACAGCTTCATACGGCAAGCCTATACATAAATTCTACTGGATACTTGAC
AAAGAAACAGTAATTGAACAAATCAAAGCATCTCATGCAGTTGAAAAGGCACTTCCTCTG
CCAACCAAGCTCAATATCACCAGCTTTGACCGCATTCCTCATCTGATGGTTGATTCTACT
GCAGAAATAGATATACTAGCAATCGTTCTTCGTTGTGGTCCTCAAAAAAATGCCGGTCGC
AGTCATCATAGGTGTCGCGAAATTACCCTTTGTGACAATCAGCGAAATCAGTTTCTCTTC
ACTCTATGGGAGGATTTTGGAGAAATAGAAGGACATGAAATTGCCTCAAAAATTGCAACA
GAGGCAGATCTGCTTGTCATCTTAGGAAGAAGTATAGGAATCTCTACTTATCAAGGGTTA
TCACTGCAAACTAGGTACAACTCCACAGTACGTGTGAATCCAAATTACCCACAGGCACTG
GCACTCCTCAACTGGGCAAAAGAAAACAAAACACTGCTGTTGCATTCTCCATCTGAGAAA
ACCTCAACAAGCTCATCTATCACTCCGATGATAGTCACTCCTGCTGGCCAACAACTTATC
TCTATTGCAAAAATCTCATCAGCACCTTCTATGGGACTGTTGTATGTTGAGGCAGAGATG
GCCATATTAGATGAGTTCCAAGACTTTTGTGTGCTTGAATGCTCAGGATGCAAACAGAAG
AAGCGGACAAAGGATAGAAAGGATTTTGAATGTCCAAAATGCAATCGGACAACATCATTA
GTACCTCGATGTAGCTTCCAAATTGATCTTATTGACAATACTGCTACAACCACAGCATCT
ATCTCTGCTGAATTAGGAGAAAACTTACTGTCCATGACAGCAGAAGACATATTTGACATG
ACTTACACTAAGCGACAATCATTGTCTCTTCATCATGTCCATGAGATGCTGTCAAACAAA
ACGTTCGAAATTCAGCTAAGGAAGTCATCTTGGAGCAGCTCAAATACCACAAATGCAACT
TTGTCCATTCTTTCCTACAAGGAAAACAACATACTCCACACAGCACTACTGATAGGACTT
GTAAGAAGATAA

Peptide Sequence

PEP ID

PGSC0003DMP400037839
PEP Infomation

pacid=37435115 transcript=PGSC0003DMT400056218 locus=PGSC0003DMG401021841 ID=PGSC0003DMT400056218.v4.03 annot-version=v4.03
Sequence

MVLRVNIDQIEPATRDWICKIQIIEIGRPRESLDKKCTFQNLILEDEEQCQIKAVMYSDE
IKQYAATLKLLNTYLISTAKVKLSTASYGKPIHKFYWILDKETVIEQIKASHAVEKALPL
PTKLNITSFDRIPHLMVDSTAEIDILAIVLRCGPQKNAGRSHHRCREITLCDNQRNQFLF
TLWEDFGEIEGHEIASKIATEADLLVILGRSIGISTYQGLSLQTRYNSTVRVNPNYPQAL
ALLNWAKENKTLLLHSPSEKTSTSSSITPMIVTPAGQQLISIAKISSAPSMGLLYVEAEM
AILDEFQDFCVLECSGCKQKKRTKDRKDFECPKCNRTTSLVPRCSFQIDLIDNTATTTAS
ISAELGENLLSMTAEDIFDMTYTKRQSLSLHHVHEMLSNKTFEIQLRKSSWSSSNTTNAT
LSILSYKENNILHTALLIGLVRR*

Transcript Sequence

Transcript ID

PGSC0003DMT400056218
Transcript Infomation

pacid=37435115 locus=PGSC0003DMG401021841 ID=PGSC0003DMT400056218.v4.03 annot-version=v4.03
Sequence

ATGGTACTAAGAGTGAACATCGACCAAATAGAACCAGCAACACGAGATTGGATTTGCAAA
ATTCAAATTATCGAAATAGGACGGCCACGAGAAAGCCTTGACAAGAAATGTACATTCCAA
AATTTAATTTTGGAAGATGAAGAGCAATGCCAAATTAAAGCCGTTATGTACAGTGACGAA
ATCAAGCAGTATGCAGCTACACTTAAACTCCTGAATACCTACCTGATCTCTACTGCAAAA
GTTAAACTGTCCACAGCTTCATACGGCAAGCCTATACATAAATTCTACTGGATACTTGAC
AAAGAAACAGTAATTGAACAAATCAAAGCATCTCATGCAGTTGAAAAGGCACTTCCTCTG
CCAACCAAGCTCAATATCACCAGCTTTGACCGCATTCCTCATCTGATGGTTGATTCTACT
GCAGAAATAGATATACTAGCAATCGTTCTTCGTTGTGGTCCTCAAAAAAATGCCGGTCGC
AGTCATCATAGGTGTCGCGAAATTACCCTTTGTGACAATCAGCGAAATCAGTTTCTCTTC
ACTCTATGGGAGGATTTTGGAGAAATAGAAGGACATGAAATTGCCTCAAAAATTGCAACA
GAGGCAGATCTGCTTGTCATCTTAGGAAGAAGTATAGGAATCTCTACTTATCAAGGGTTA
TCACTGCAAACTAGGTACAACTCCACAGTACGTGTGAATCCAAATTACCCACAGGCACTG
GCACTCCTCAACTGGGCAAAAGAAAACAAAACACTGCTGTTGCATTCTCCATCTGAGAAA
ACCTCAACAAGCTCATCTATCACTCCGATGATAGTCACTCCTGCTGGCCAACAACTTATC
TCTATTGCAAAAATCTCATCAGCACCTTCTATGGGACTGTTGTATGTTGAGGCAGAGATG
GCCATATTAGATGAGTTCCAAGACTTTTGTGTGCTTGAATGCTCAGGATGCAAACAGAAG
AAGCGGACAAAGGATAGAAAGGATTTTGAATGTCCAAAATGCAATCGGACAACATCATTA
GTACCTCGATGTAGCTTCCAAATTGATCTTATTGACAATACTGCTACAACCACAGCATCT
ATCTCTGCTGAATTAGGAGAAAACTTACTGTCCATGACAGCAGAAGACATATTTGACATG
ACTTACACTAAGCGACAATCATTGTCTCTTCATCATGTCCATGAGATGCTGTCAAACAAA
ACGTTCGAAATTCAGCTAAGGAAGTCATCTTGGAGCAGCTCAAATACCACAAATGCAACT
TTGTCCATTCTTTCCTACAAGGAAAACAACATACTCCACACAGCACTACTGATAGGACTT
GTAAGAAGATAA