Plant GARDEN
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TOP > About the Species(Solanum tuberosum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400056152
CDS Infomation

pacid=37445887 polypeptide=PGSC0003DMP400037797 locus=PGSC0003DMG400021815 ID=PGSC0003DMT400056152.v4.03 annot-version=v4.03
Sequence

ATGGCGCTCTATCCATTGCCCACCGCCATTATACTCAATAGAATCACTCCTTTTACATGC
CGCTTTTTCCCCAAACCTCTCTCTTCTTCCCTCTTCTCCGCCGCCGCCGTCTCCGCCGCG
ATTACCGCAACCTTACCCCAACACCTTTCCTATGGACCTTCCCTCTACAAAGGCCACAAA
ACTTCACACCAAAACTCCGATGAAGAAAACTTCACTAGAGTCTTCGATATCACTGCTTTA
CGAGTCCCTGCAGAACAATGTTTCTCACTCGAGAGCAGATTACGCGGACACCTTTTAAAT
TGGCCGCGCATTCGGAACATTGCTAGGGTTGCCGGTGATGATATTGATGACGAATTGAAG
GAGTTTATTGGAAATGATATTAGTACTGATGATGAAACCCTAACAGTATTGGAACGGAGA
ATTTACGGGAAAGGTGAAGGTGATGGGGAGAAAATGTGTTCGGTGTTGTATAGAGATAAG
CTTGCGAAGACTTTCAATTCGATAGGATATGTGAAGTTTGAGAATTTGGCTAAAATATCG
CGGCCGAAGAAGAAGAAATGGGAGAGAGAGGAAAAAGAGGGAAATGGAAGTGAGAGGAGA
GGGTATGGGAGAAGTGATATGTCAATGGTGGAGGTGGTTGAAGAAGAGGGGAGTGGAGAT
GAGGATTTCAGTGGGTTATTGGGTGATGATTTTAGAAGAAGAAAATGGAGTGGATCGACG
AGGTTATTGCTATTGGATGAGAGGTACGCGAACAAGGGGATAGAGGAAATGCCCGAGGCA
ATTAAGGCAGTCCTCAAAGAACACAATGAGGAAAGTACAAGATTAAGTTTTGAAATTGTG
AGATGCAAGTTGACATTATTATACAATTATTGGCAAATGAATGAGGTATGTCCCTTTTTT
TGA

Peptide Sequence

PEP ID

PGSC0003DMP400037797
PEP Infomation

pacid=37445887 transcript=PGSC0003DMT400056152 locus=PGSC0003DMG400021815 ID=PGSC0003DMT400056152.v4.03 annot-version=v4.03
Sequence

MALYPLPTAIILNRITPFTCRFFPKPLSSSLFSAAAVSAAITATLPQHLSYGPSLYKGHK
TSHQNSDEENFTRVFDITALRVPAEQCFSLESRLRGHLLNWPRIRNIARVAGDDIDDELK
EFIGNDISTDDETLTVLERRIYGKGEGDGEKMCSVLYRDKLAKTFNSIGYVKFENLAKIS
RPKKKKWEREEKEGNGSERRGYGRSDMSMVEVVEEEGSGDEDFSGLLGDDFRRRKWSGST
RLLLLDERYANKGIEEMPEAIKAVLKEHNEESTRLSFEIVRCKLTLLYNYWQMNEVCPFF
*

Transcript Sequence

Transcript ID

PGSC0003DMT400056152
Transcript Infomation

pacid=37445887 locus=PGSC0003DMG400021815 ID=PGSC0003DMT400056152.v4.03 annot-version=v4.03
Sequence

ATGGCGCTCTATCCATTGCCCACCGCCATTATACTCAATAGAATCACTCCTTTTACATGC
CGCTTTTTCCCCAAACCTCTCTCTTCTTCCCTCTTCTCCGCCGCCGCCGTCTCCGCCGCG
ATTACCGCAACCTTACCCCAACACCTTTCCTATGGACCTTCCCTCTACAAAGGCCACAAA
ACTTCACACCAAAACTCCGATGAAGAAAACTTCACTAGAGTCTTCGATATCACTGCTTTA
CGAGTCCCTGCAGAACAATGTTTCTCACTCGAGAGCAGATTACGCGGACACCTTTTAAAT
TGGCCGCGCATTCGGAACATTGCTAGGGTTGCCGGTGATGATATTGATGACGAATTGAAG
GAGTTTATTGGAAATGATATTAGTACTGATGATGAAACCCTAACAGTATTGGAACGGAGA
ATTTACGGGAAAGGTGAAGGTGATGGGGAGAAAATGTGTTCGGTGTTGTATAGAGATAAG
CTTGCGAAGACTTTCAATTCGATAGGATATGTGAAGTTTGAGAATTTGGCTAAAATATCG
CGGCCGAAGAAGAAGAAATGGGAGAGAGAGGAAAAAGAGGGAAATGGAAGTGAGAGGAGA
GGGTATGGGAGAAGTGATATGTCAATGGTGGAGGTGGTTGAAGAAGAGGGGAGTGGAGAT
GAGGATTTCAGTGGGTTATTGGGTGATGATTTTAGAAGAAGAAAATGGAGTGGATCGACG
AGGTTATTGCTATTGGATGAGAGGTACGCGAACAAGGGGATAGAGGAAATGCCCGAGGCA
ATTAAGGCAGTCCTCAAAGAACACAATGAGGAAAGTACAAGATTAAGTTTTGAAATTGTG
AGATGCAAGTTGACATTATTATACAATTATTGGCAAATGAATGAGGTATGTCCCTTTTTT
TGA