Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400056132
CDS Infomation

pacid=37447745 polypeptide=PGSC0003DMP400037779 locus=PGSC0003DMG400021807 ID=PGSC0003DMT400056132.v4.03 annot-version=v4.03
Sequence

ATGGCTCCCAAAAACCAGAACAAGCCGCCACTTCGTACTCTTTCAGCCCCTTCTGATAGT
AACTACACAGCAGGTGAGGTTTCATTAGAGAAGAGAAGGAGAATAGGGAATCCAAAAATG
CCGTCCACAGCTACTGGTGCAAGAACCCGACAGGCATTAGCAGTGGTGAATGGGGTTGCA
GATGTGCCTCCAACTAGTGGTCCGCCAAGTAGTGCAGGTTCAGACGGCGGGATAGTTGAG
TTTAGCAAAGAAGAAGTTGAAGCTTTACTCACTGAGAAACTGAAAACCAAGAACAAGTAT
AATACAAAGGAAAAATGTGATCTTATGTCAGATTATATAAGAAGGCTCAAGTTATGTATT
AAGTGGTTCCAGCAGCTAGAAGGAAACTATGTTACAGAACAGGCATCACTCAGCGGCATG
TTAGAGTCAGCTGAGAAAAAATGCAATGAGATGGAGATGCTAATGAATGTCAAAGAGGAA
GAGTTGAATTCAATCATCAAGGAGTTGAGAAAAGATATTGAGGCACTCCAGGAAAAGTTT
GCCAAGGAGGAGGCAGCCAAGTTGGAAGCAGTGGATTCTTATAATAGAGAGAAACATGCT
AGAGATATAGCAGAGAAACTGCAAGCTTCCCTTTCAGAAGAGCTCAAAAGAGCTCAACAA
GACACTGCAAGTGCAAATCAGAAGATCCAGTCTCTAAGTAATACATACAAGGGGTTACAA
GAGTACAACAAAAATTTACAGGATTATAACAGTAAGCTCCAGAAAGACCTTGGTACAGTC
AATGAAACACTGAAGCGCGTGGAGACAGAGAAAGCTGCAGTGGTTGAAAATCTCAGTGGA
CTTCGGGGTCATTATACTTCTTTACAGGAACAGCTCACTTCTTCTAGAGCTGTTCAGGAT
GAGTCTGTCAAACAAAAAGAGGCTTTAGCTAGTGAAGTAGGATTCTTGCGAGGAGATCTG
CAAAAAATGAGGGATGATCGTGATCAGCAATCGTTACAAGTTCAGGTTCTAACAGCTGAA
GTGATAAAATATAAGGAATGCACTGGAAAATCTATTGCCGAATTAGAAGGCATGGCGATA
AAGATCAATCAGCTGGAGGAGACATGTTTGTCTCAGTGTGAACAAATAAAAAGATTGCAG
CAACAACTTGCCTTTGCAGAGAAAAAACTCGAGATGTCCGACATGTCAGCTGTGAGGACA
AAAGAAGAATATGAAGAGCAGAAGAATGTTATTTTTGACTTGCAGAACTGTCTTGCTGAT
GCCGAAACTAAAATTGTTGAAGGAGAGAAACTGCGTAAAAAATTGCACAATACTATTCTG
GAATTGAAAGGCAACATTAGAGTTTTCTGCAGGGTGAGGCCATTTTTGTCTGATGACGCT
GTCAGTGCAGAAACAAAGGTTATCTCTTTTCCAACTTCAACCGAAGCACAAGGAAGAGGC
ATCGATTTGATCCAAAATGGACAAAAACAATCATTCACATTTGACAAAGTATTCATGCCT
GAGGCTTCACAAGAAGATGTTTTTGTTGAGATATCCCAACTTGTACAGAGTGCTCTTGAC
GGTTATAAGGTTTGCATATTTGCTTACGGTCAGACTGGTTCCGGTAAAACTCACACAATG
GTGGGCAAGCCAGACTCTGATAATCAGAAAGGGCTTATTCCACGCTCTTTAGAGCAGGTA
TTTGAGACCAGGCAGTCTCTCCAAAACCAAGGGTGGAACTATAAAATGCAGGTCTCAATG
CTTGAAATTTACAATGAAACTATTCGGGATCTTTTATCAACATCAAATTCGTCTAGTTTT
GATGCATCCCGACCAGAACATGTAGGAAAGCAATATGCCATCAAACATGATGTGAATGGA
AATACCCATGTATCTGACCTGACAATTGTGGATGTTCATTGCTATAGTCAGGTTTCTAAA
CTTTTTGGGCTGGCAGCAGAAAGCAGATCTGTTGGGAAGACTCAGATGAACCAACAGTCT
TCAAGGAGCCATTTTGTCTTCACTCTGAGAATTTCTGGTGTGAATGAGAGTACCGAGCAA
CAAGTACAAGGTGTACTCAATTTGATTGATCTCGCTGGAAGTGAACGTCTATCCAAGAGT
GGGTGTACTGGAGATCGGCTAAAAGAAACTCAAGCCATCAACAAGAGTCTATCGTCTCTA
AGTGATGTCATATTTGCTCTAGCAAAGAAAGAGGAGCATGTGCCTTTTAGGAACTCAAAG
CTCACATACCTTCTCCAGCCCTGTCTAGGTGGTAACTCGAAGACATTAATGTTTGTTAAT
GTTTCACCGGATCCTCCATCTGTGGGTGAATCCCTGTGTTCACTCCGATTTGCAGCACGG
GTTAATGCATGTGAGATTGGGATCCCAAGACGTCAAACTAGCTTGCGTCCCATAGATTCT
CGCCTAAGCATTGGCTAA

Peptide Sequence

PEP ID

PGSC0003DMP400037779
PEP Infomation

pacid=37447745 transcript=PGSC0003DMT400056132 locus=PGSC0003DMG400021807 ID=PGSC0003DMT400056132.v4.03 annot-version=v4.03
Sequence

MAPKNQNKPPLRTLSAPSDSNYTAGEVSLEKRRRIGNPKMPSTATGARTRQALAVVNGVA
DVPPTSGPPSSAGSDGGIVEFSKEEVEALLTEKLKTKNKYNTKEKCDLMSDYIRRLKLCI
KWFQQLEGNYVTEQASLSGMLESAEKKCNEMEMLMNVKEEELNSIIKELRKDIEALQEKF
AKEEAAKLEAVDSYNREKHARDIAEKLQASLSEELKRAQQDTASANQKIQSLSNTYKGLQ
EYNKNLQDYNSKLQKDLGTVNETLKRVETEKAAVVENLSGLRGHYTSLQEQLTSSRAVQD
ESVKQKEALASEVGFLRGDLQKMRDDRDQQSLQVQVLTAEVIKYKECTGKSIAELEGMAI
KINQLEETCLSQCEQIKRLQQQLAFAEKKLEMSDMSAVRTKEEYEEQKNVIFDLQNCLAD
AETKIVEGEKLRKKLHNTILELKGNIRVFCRVRPFLSDDAVSAETKVISFPTSTEAQGRG
IDLIQNGQKQSFTFDKVFMPEASQEDVFVEISQLVQSALDGYKVCIFAYGQTGSGKTHTM
VGKPDSDNQKGLIPRSLEQVFETRQSLQNQGWNYKMQVSMLEIYNETIRDLLSTSNSSSF
DASRPEHVGKQYAIKHDVNGNTHVSDLTIVDVHCYSQVSKLFGLAAESRSVGKTQMNQQS
SRSHFVFTLRISGVNESTEQQVQGVLNLIDLAGSERLSKSGCTGDRLKETQAINKSLSSL
SDVIFALAKKEEHVPFRNSKLTYLLQPCLGGNSKTLMFVNVSPDPPSVGESLCSLRFAAR
VNACEIGIPRRQTSLRPIDSRLSIG*

Transcript Sequence

Transcript ID

PGSC0003DMT400056132
Transcript Infomation

pacid=37447745 locus=PGSC0003DMG400021807 ID=PGSC0003DMT400056132.v4.03 annot-version=v4.03
Sequence

ATGGCTCCCAAAAACCAGAACAAGCCGCCACTTCGTACTCTTTCAGCCCCTTCTGATAGT
AACTACACAGCAGGTGAGGTTTCATTAGAGAAGAGAAGGAGAATAGGGAATCCAAAAATG
CCGTCCACAGCTACTGGTGCAAGAACCCGACAGGCATTAGCAGTGGTGAATGGGGTTGCA
GATGTGCCTCCAACTAGTGGTCCGCCAAGTAGTGCAGGTTCAGACGGCGGGATAGTTGAG
TTTAGCAAAGAAGAAGTTGAAGCTTTACTCACTGAGAAACTGAAAACCAAGAACAAGTAT
AATACAAAGGAAAAATGTGATCTTATGTCAGATTATATAAGAAGGCTCAAGTTATGTATT
AAGTGGTTCCAGCAGCTAGAAGGAAACTATGTTACAGAACAGGCATCACTCAGCGGCATG
TTAGAGTCAGCTGAGAAAAAATGCAATGAGATGGAGATGCTAATGAATGTCAAAGAGGAA
GAGTTGAATTCAATCATCAAGGAGTTGAGAAAAGATATTGAGGCACTCCAGGAAAAGTTT
GCCAAGGAGGAGGCAGCCAAGTTGGAAGCAGTGGATTCTTATAATAGAGAGAAACATGCT
AGAGATATAGCAGAGAAACTGCAAGCTTCCCTTTCAGAAGAGCTCAAAAGAGCTCAACAA
GACACTGCAAGTGCAAATCAGAAGATCCAGTCTCTAAGTAATACATACAAGGGGTTACAA
GAGTACAACAAAAATTTACAGGATTATAACAGTAAGCTCCAGAAAGACCTTGGTACAGTC
AATGAAACACTGAAGCGCGTGGAGACAGAGAAAGCTGCAGTGGTTGAAAATCTCAGTGGA
CTTCGGGGTCATTATACTTCTTTACAGGAACAGCTCACTTCTTCTAGAGCTGTTCAGGAT
GAGTCTGTCAAACAAAAAGAGGCTTTAGCTAGTGAAGTAGGATTCTTGCGAGGAGATCTG
CAAAAAATGAGGGATGATCGTGATCAGCAATCGTTACAAGTTCAGGTTCTAACAGCTGAA
GTGATAAAATATAAGGAATGCACTGGAAAATCTATTGCCGAATTAGAAGGCATGGCGATA
AAGATCAATCAGCTGGAGGAGACATGTTTGTCTCAGTGTGAACAAATAAAAAGATTGCAG
CAACAACTTGCCTTTGCAGAGAAAAAACTCGAGATGTCCGACATGTCAGCTGTGAGGACA
AAAGAAGAATATGAAGAGCAGAAGAATGTTATTTTTGACTTGCAGAACTGTCTTGCTGAT
GCCGAAACTAAAATTGTTGAAGGAGAGAAACTGCGTAAAAAATTGCACAATACTATTCTG
GAATTGAAAGGCAACATTAGAGTTTTCTGCAGGGTGAGGCCATTTTTGTCTGATGACGCT
GTCAGTGCAGAAACAAAGGTTATCTCTTTTCCAACTTCAACCGAAGCACAAGGAAGAGGC
ATCGATTTGATCCAAAATGGACAAAAACAATCATTCACATTTGACAAAGTATTCATGCCT
GAGGCTTCACAAGAAGATGTTTTTGTTGAGATATCCCAACTTGTACAGAGTGCTCTTGAC
GGTTATAAGGTTTGCATATTTGCTTACGGTCAGACTGGTTCCGGTAAAACTCACACAATG
GTGGGCAAGCCAGACTCTGATAATCAGAAAGGGCTTATTCCACGCTCTTTAGAGCAGGTA
TTTGAGACCAGGCAGTCTCTCCAAAACCAAGGGTGGAACTATAAAATGCAGGTCTCAATG
CTTGAAATTTACAATGAAACTATTCGGGATCTTTTATCAACATCAAATTCGTCTAGTTTT
GATGCATCCCGACCAGAACATGTAGGAAAGCAATATGCCATCAAACATGATGTGAATGGA
AATACCCATGTATCTGACCTGACAATTGTGGATGTTCATTGCTATAGTCAGGTTTCTAAA
CTTTTTGGGCTGGCAGCAGAAAGCAGATCTGTTGGGAAGACTCAGATGAACCAACAGTCT
TCAAGGAGCCATTTTGTCTTCACTCTGAGAATTTCTGGTGTGAATGAGAGTACCGAGCAA
CAAGTACAAGGTGTACTCAATTTGATTGATCTCGCTGGAAGTGAACGTCTATCCAAGAGT
GGGTGTACTGGAGATCGGCTAAAAGAAACTCAAGCCATCAACAAGAGTCTATCGTCTCTA
AGTGATGTCATATTTGCTCTAGCAAAGAAAGAGGAGCATGTGCCTTTTAGGAACTCAAAG
CTCACATACCTTCTCCAGCCCTGTCTAGGTGGTAACTCGAAGACATTAATGTTTGTTAAT
GTTTCACCGGATCCTCCATCTGTGGGTGAATCCCTGTGTTCACTCCGATTTGCAGCACGG
GTTAATGCATGTGAGATTGGGATCCCAAGACGTCAAACTAGCTTGCGTCCCATAGATTCT
CGCCTAAGCATTGGCTAA