Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400056126
CDS Infomation

pacid=37448188 polypeptide=PGSC0003DMP400037774 locus=PGSC0003DMG400021804 ID=PGSC0003DMT400056126.v4.03 annot-version=v4.03
Sequence

ATGAAGCTGCTACAAACAACTATTCATTTCTTGTTCGTTTTCTACTTATTTTCCATTTTC
CAAATTTCATTAGGTGATACCATAACAACAACTCAATTTCTCAAAGATGGTGAACCCAGT
ATCACTTCATCCGGTGGAAGTTTTCAGATGGGGTTTTTCAGTCCAGGTAATTCCAAAAAT
CGTTATATAGGTATATGGTATAGCAACATATCTGTAACAACCGTTGTTTGGGTTGCCAAT
AGAGAAGCTCCTCTAGGAACTAATTCAGGTACCCTAAAAGTTATCAAACCAGGACTACTT
GTTATAGTGAATGATAGTAACCACATCATATGGTCTACCAATACCTCGAGATCTGTGCAA
AACCCTGTTGCAAAGTTGCTTGATTCTGGAAATCTTGTTGTTATTGATGCTGGTCATGGT
GTTGGTGATGATATTAAAATTGGGGATTTTCTCTGGCAGAGTTTTGATTACCCAACTGAT
ACCCTTTTGCCCGGGATGAAAATTGGGTGGAATTTTGTAACTGGGAAGGAACTGTATTTG
TCGTCGTGGAAGAACGAGGAGGATCCAGCTCCGGGTGATTATACGTACCATTGTGATCCT
TCTGGTTACTTGCAGAACATTTTGAAGAAAGGTTCAAAGGAGGTATACAGATCTGGGCCA
TGGAATGGCTTAAGGTTTAGCGGAGCAACAAGTTCAAGACAAAGTCCATTTTATACATTT
GGTGTGATTTCAACTAAAACTGAGGTGTATTTTAGTTATCACCTTCTAGCTTCGGTTATT
ACAAGGTTTTGTTTGAATCCAAATGGTGCGTTACAACGATGGACTTGGGGCGATAGGAAT
AAAGGTTGGGCACTTTACCTTTCATTACCAACAGATAATTGTGATACTTATAAGTTGTGT
GGAGGATATGGTAGTTGTAGTAGTTTGAATTCTCCGGTATGTGGATGTTTAGAAAAGTTC
GAGCCTAAACATGTTGAAGATTGGGGGAAGGCAGATTGGTCAAGTGGTTGTGTTAGGAGG
ATTGAACTGAATTGCATCAAGGGAGATGGATTTTTGAAGTATTCGAAACTTAAATTACCA
GACACGCGGAATTCATGGTTTAATGTGACTATGAACCTTGAAGAATGCCGGAAAGTTTGC
TTGAGAAATTGCTCTTGTATGGCATACTCAAATCTTGACATACGCAATGGAGGAACCGGT
TGCTTACTGTGGTCTGAAGATCTGCTTGATATTCGACAGCTAGCCAACGAAGGACAAGAT
ATCTACATTAGAATGGCTGCCTCTGAATTAGCTAGTCAGGTGAAATCAAATGGACACAAA
CGAAAATTACTCTCCTGGATTATCCCGTTATCGGCTGGAGTGATTTTGGTAATCCTAAGC
CTAGTGATCTGGATTAGAAGAAGGAAGATAGCTTCAGAGAAAAAGAAAGGATGCTGGGGG
AACAATGGCAATTACAAGATGGATTACCTCAACGGAAACCTCAGTGAAGAATATGAGTTA
CCACTGTTCGACTTATCTACAATAGCTAAATCTACGAACAACTTTTCAGGGATGAGCAAA
ATTGGAGAAGGTGGATATGGACCTGTTTACAAGGGCGTGCTTGAACACGGACAGGAAATA
GCTGTGAAGCGGTTGTCTAGGACTTCCACACAAGGACAAGAGGAGTTCATGAATGAAGTG
ATGTATATTGTGAAACTTCAGCATAGAAATCTGGTGAAGATTCTCGGATGTTGCATCGAA
GGAGAAGAAAAAATGTTGATCTATGAGTACATGCCAAATGGAAGTCTTGATTCATTTATA
TTTGATGACACACGAAGCACGGTATTAGACTGGTCTAAGCGCTTTCACATAATCAATGGG
ATAGCTCGGGGACTTATGTATCTGCATCAAGATTCTCAGTTGAGGATCATTCACAGGGAC
CTGAAAGCTAACAACATTTTACTAGACAATGACATGAATCCAAAGATATCAGACTTCGGT
ATAGCAAGAAGTTGTGAAGACGACAAGTTTGGAGCCAAGACACACCGAGTAGTTGGAACA
TATGGCTACCTCTCACCGGAATATGCTGTACATGGTGTCTACTCGGTGAAGTCAGATGTA
TTTAGCTTTGGTGTCTTAGTTCTTGAAATTGTGAGTGGGAAAGGGAACAGAAAATTCTCT
CATCCAGACCATAACCTTAACCTCCTCGGACATGTAAGGGTTGTGTTTTTCATTGTCCAT
CAGTAA

Peptide Sequence

PEP ID

PGSC0003DMP400037774
PEP Infomation

pacid=37448188 transcript=PGSC0003DMT400056126 locus=PGSC0003DMG400021804 ID=PGSC0003DMT400056126.v4.03 annot-version=v4.03
Sequence

MKLLQTTIHFLFVFYLFSIFQISLGDTITTTQFLKDGEPSITSSGGSFQMGFFSPGNSKN
RYIGIWYSNISVTTVVWVANREAPLGTNSGTLKVIKPGLLVIVNDSNHIIWSTNTSRSVQ
NPVAKLLDSGNLVVIDAGHGVGDDIKIGDFLWQSFDYPTDTLLPGMKIGWNFVTGKELYL
SSWKNEEDPAPGDYTYHCDPSGYLQNILKKGSKEVYRSGPWNGLRFSGATSSRQSPFYTF
GVISTKTEVYFSYHLLASVITRFCLNPNGALQRWTWGDRNKGWALYLSLPTDNCDTYKLC
GGYGSCSSLNSPVCGCLEKFEPKHVEDWGKADWSSGCVRRIELNCIKGDGFLKYSKLKLP
DTRNSWFNVTMNLEECRKVCLRNCSCMAYSNLDIRNGGTGCLLWSEDLLDIRQLANEGQD
IYIRMAASELASQVKSNGHKRKLLSWIIPLSAGVILVILSLVIWIRRRKIASEKKKGCWG
NNGNYKMDYLNGNLSEEYELPLFDLSTIAKSTNNFSGMSKIGEGGYGPVYKGVLEHGQEI
AVKRLSRTSTQGQEEFMNEVMYIVKLQHRNLVKILGCCIEGEEKMLIYEYMPNGSLDSFI
FDDTRSTVLDWSKRFHIINGIARGLMYLHQDSQLRIIHRDLKANNILLDNDMNPKISDFG
IARSCEDDKFGAKTHRVVGTYGYLSPEYAVHGVYSVKSDVFSFGVLVLEIVSGKGNRKFS
HPDHNLNLLGHVRVVFFIVHQ*

Transcript Sequence

Transcript ID

PGSC0003DMT400056126
Transcript Infomation

pacid=37448188 locus=PGSC0003DMG400021804 ID=PGSC0003DMT400056126.v4.03 annot-version=v4.03
Sequence

ATGAAGCTGCTACAAACAACTATTCATTTCTTGTTCGTTTTCTACTTATTTTCCATTTTC
CAAATTTCATTAGGTGATACCATAACAACAACTCAATTTCTCAAAGATGGTGAACCCAGT
ATCACTTCATCCGGTGGAAGTTTTCAGATGGGGTTTTTCAGTCCAGGTAATTCCAAAAAT
CGTTATATAGGTATATGGTATAGCAACATATCTGTAACAACCGTTGTTTGGGTTGCCAAT
AGAGAAGCTCCTCTAGGAACTAATTCAGGTACCCTAAAAGTTATCAAACCAGGACTACTT
GTTATAGTGAATGATAGTAACCACATCATATGGTCTACCAATACCTCGAGATCTGTGCAA
AACCCTGTTGCAAAGTTGCTTGATTCTGGAAATCTTGTTGTTATTGATGCTGGTCATGGT
GTTGGTGATGATATTAAAATTGGGGATTTTCTCTGGCAGAGTTTTGATTACCCAACTGAT
ACCCTTTTGCCCGGGATGAAAATTGGGTGGAATTTTGTAACTGGGAAGGAACTGTATTTG
TCGTCGTGGAAGAACGAGGAGGATCCAGCTCCGGGTGATTATACGTACCATTGTGATCCT
TCTGGTTACTTGCAGAACATTTTGAAGAAAGGTTCAAAGGAGGTATACAGATCTGGGCCA
TGGAATGGCTTAAGGTTTAGCGGAGCAACAAGTTCAAGACAAAGTCCATTTTATACATTT
GGTGTGATTTCAACTAAAACTGAGGTGTATTTTAGTTATCACCTTCTAGCTTCGGTTATT
ACAAGGTTTTGTTTGAATCCAAATGGTGCGTTACAACGATGGACTTGGGGCGATAGGAAT
AAAGGTTGGGCACTTTACCTTTCATTACCAACAGATAATTGTGATACTTATAAGTTGTGT
GGAGGATATGGTAGTTGTAGTAGTTTGAATTCTCCGGTATGTGGATGTTTAGAAAAGTTC
GAGCCTAAACATGTTGAAGATTGGGGGAAGGCAGATTGGTCAAGTGGTTGTGTTAGGAGG
ATTGAACTGAATTGCATCAAGGGAGATGGATTTTTGAAGTATTCGAAACTTAAATTACCA
GACACGCGGAATTCATGGTTTAATGTGACTATGAACCTTGAAGAATGCCGGAAAGTTTGC
TTGAGAAATTGCTCTTGTATGGCATACTCAAATCTTGACATACGCAATGGAGGAACCGGT
TGCTTACTGTGGTCTGAAGATCTGCTTGATATTCGACAGCTAGCCAACGAAGGACAAGAT
ATCTACATTAGAATGGCTGCCTCTGAATTAGCTAGTCAGGTGAAATCAAATGGACACAAA
CGAAAATTACTCTCCTGGATTATCCCGTTATCGGCTGGAGTGATTTTGGTAATCCTAAGC
CTAGTGATCTGGATTAGAAGAAGGAAGATAGCTTCAGAGAAAAAGAAAGGATGCTGGGGG
AACAATGGCAATTACAAGATGGATTACCTCAACGGAAACCTCAGTGAAGAATATGAGTTA
CCACTGTTCGACTTATCTACAATAGCTAAATCTACGAACAACTTTTCAGGGATGAGCAAA
ATTGGAGAAGGTGGATATGGACCTGTTTACAAGGGCGTGCTTGAACACGGACAGGAAATA
GCTGTGAAGCGGTTGTCTAGGACTTCCACACAAGGACAAGAGGAGTTCATGAATGAAGTG
ATGTATATTGTGAAACTTCAGCATAGAAATCTGGTGAAGATTCTCGGATGTTGCATCGAA
GGAGAAGAAAAAATGTTGATCTATGAGTACATGCCAAATGGAAGTCTTGATTCATTTATA
TTTGATGACACACGAAGCACGGTATTAGACTGGTCTAAGCGCTTTCACATAATCAATGGG
ATAGCTCGGGGACTTATGTATCTGCATCAAGATTCTCAGTTGAGGATCATTCACAGGGAC
CTGAAAGCTAACAACATTTTACTAGACAATGACATGAATCCAAAGATATCAGACTTCGGT
ATAGCAAGAAGTTGTGAAGACGACAAGTTTGGAGCCAAGACACACCGAGTAGTTGGAACA
TATGGCTACCTCTCACCGGAATATGCTGTACATGGTGTCTACTCGGTGAAGTCAGATGTA
TTTAGCTTTGGTGTCTTAGTTCTTGAAATTGTGAGTGGGAAAGGGAACAGAAAATTCTCT
CATCCAGACCATAACCTTAACCTCCTCGGACATGTAAGGGTTGTGTTTTTCATTGTCCAT
CAGTAA