Plant GARDEN
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TOP > About the Species(Solanum tuberosum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400056084
CDS Infomation

pacid=37458846 polypeptide=PGSC0003DMP400037746 locus=PGSC0003DMG400021787 ID=PGSC0003DMT400056084.v4.03 annot-version=v4.03
Sequence

ATGGACAAGAAGCCTCATGCAGTGTGCATACCATTTCCCGCACAAGGTCAGGTAATGCCA
TTCATGAAATTAGCCAAAATTTTGCACTCAAGAGGTTTCTATGTAACATTTGTCAACACT
GAATATAACCATAGACGTCTAATCCGATCACAAGGCCCTGACTTTGTGAAAGGCTTCCAA
GATTTCCAATATGAAACTATCCCGGAAGGATTGTCACAATCAGATCGCGATGTAACTCAA
GATCCTGCTTCGTTATGTGACTCAATAAGGAAGAACTGCTTGACTCCTTTTCGGGATTTA
CTATCAAAGCTTGGTTCATCACCGGTCGTTCCACCAATTTCTTGTATAATATCAGATGGA
CTGATGAGCTTTGCCATTAAGGCTGCACAAGAATTTGGCATCCTTGATGTCCAATTTTGG
ACAGCCTCAGCTTGTGGTTATATGGGATATCTTCAATATGATGAACTAACAAGAAGAGGG
ACTATCCCGTTTAAAGATGACAGTTTTATGGAGGATGGTACACTGGATAGAGTTGTTGAT
GGAATTCCAGGAATGAGAAACATTAGGTTTAAAGACTTGCCAAGCTTTATCATGACTACT
GATCCACATGATATTCTGTTAAACTATTTAAGTGATGAAGCACAAAATTGCTTGAAATCT
TCTGCGATGATCATCAACACATTCACTGAATTGGAACGTGAAGTCCTAGAAGCGATTGAA
GCTAGATTCCCAAATATTTATGTTACCGGTCCACTTTCATTGATGGAAAAAACCATCCAT
GAAAACAAATTGAGCTCATTTAGGCCAAGTTTATGGAAAGAAGAATTCCAATGTCTTGAG
TGGCTGAATAAACAGGAACCAAGTTCAGTAATCTATGTGAATTATGGATGTGTGACATTA
ATGTCAGACCATCACCTAAAAGAATTCGCGTGGGGACTTGCAAATAGCAAGCATCCATTT
TTGTGGATCGTTAGGCCCGACATAGTGATGGGGGATTCAGCCGTGTTGCCTGATGAGTTT
CTTGAAGAGATTAAAGACAGAGGATTATTAGCAAGCTGGTGCCCACAAGATCAAGTTCTT
TCCCACCCATCTATTGGCGTTTTTCTAACACATTGTGGATGGAACTCTACGATTGAAAGC
ATAAGTTCAGGAGTTCCTCTAATTTGCTGGCCATTCTTTGCTGAGCAGCAAACAAATTGT
CGATATGCGTGTGTAGAGTGGGGAATAGGTGTTGAGGTCAATAAAGACGTAAAGCGCCAA
GAAATCGAAGCAATTATCAATGATATGTTAGAAGGTGAAAAAGGTAAGGATTTGAAAGAC
AAGGCGTTGGAGTGGAAGAAGAAAGCAGCAGAAGCAACTGATATTGGAGGGTCTTCATGG
AAACACTTTGATACATTCTTGGAAAAACTTCTCCTTAGTAGGGAATAG

Peptide Sequence

PEP ID

PGSC0003DMP400037746
PEP Infomation

pacid=37458846 transcript=PGSC0003DMT400056084 locus=PGSC0003DMG400021787 ID=PGSC0003DMT400056084.v4.03 annot-version=v4.03
Sequence

MDKKPHAVCIPFPAQGQVMPFMKLAKILHSRGFYVTFVNTEYNHRRLIRSQGPDFVKGFQ
DFQYETIPEGLSQSDRDVTQDPASLCDSIRKNCLTPFRDLLSKLGSSPVVPPISCIISDG
LMSFAIKAAQEFGILDVQFWTASACGYMGYLQYDELTRRGTIPFKDDSFMEDGTLDRVVD
GIPGMRNIRFKDLPSFIMTTDPHDILLNYLSDEAQNCLKSSAMIINTFTELEREVLEAIE
ARFPNIYVTGPLSLMEKTIHENKLSSFRPSLWKEEFQCLEWLNKQEPSSVIYVNYGCVTL
MSDHHLKEFAWGLANSKHPFLWIVRPDIVMGDSAVLPDEFLEEIKDRGLLASWCPQDQVL
SHPSIGVFLTHCGWNSTIESISSGVPLICWPFFAEQQTNCRYACVEWGIGVEVNKDVKRQ
EIEAIINDMLEGEKGKDLKDKALEWKKKAAEATDIGGSSWKHFDTFLEKLLLSRE*

Transcript Sequence

Transcript ID

PGSC0003DMT400056084
Transcript Infomation

pacid=37458846 locus=PGSC0003DMG400021787 ID=PGSC0003DMT400056084.v4.03 annot-version=v4.03
Sequence

ATGGACAAGAAGCCTCATGCAGTGTGCATACCATTTCCCGCACAAGGTCAGGTAATGCCA
TTCATGAAATTAGCCAAAATTTTGCACTCAAGAGGTTTCTATGTAACATTTGTCAACACT
GAATATAACCATAGACGTCTAATCCGATCACAAGGCCCTGACTTTGTGAAAGGCTTCCAA
GATTTCCAATATGAAACTATCCCGGAAGGATTGTCACAATCAGATCGCGATGTAACTCAA
GATCCTGCTTCGTTATGTGACTCAATAAGGAAGAACTGCTTGACTCCTTTTCGGGATTTA
CTATCAAAGCTTGGTTCATCACCGGTCGTTCCACCAATTTCTTGTATAATATCAGATGGA
CTGATGAGCTTTGCCATTAAGGCTGCACAAGAATTTGGCATCCTTGATGTCCAATTTTGG
ACAGCCTCAGCTTGTGGTTATATGGGATATCTTCAATATGATGAACTAACAAGAAGAGGG
ACTATCCCGTTTAAAGATGACAGTTTTATGGAGGATGGTACACTGGATAGAGTTGTTGAT
GGAATTCCAGGAATGAGAAACATTAGGTTTAAAGACTTGCCAAGCTTTATCATGACTACT
GATCCACATGATATTCTGTTAAACTATTTAAGTGATGAAGCACAAAATTGCTTGAAATCT
TCTGCGATGATCATCAACACATTCACTGAATTGGAACGTGAAGTCCTAGAAGCGATTGAA
GCTAGATTCCCAAATATTTATGTTACCGGTCCACTTTCATTGATGGAAAAAACCATCCAT
GAAAACAAATTGAGCTCATTTAGGCCAAGTTTATGGAAAGAAGAATTCCAATGTCTTGAG
TGGCTGAATAAACAGGAACCAAGTTCAGTAATCTATGTGAATTATGGATGTGTGACATTA
ATGTCAGACCATCACCTAAAAGAATTCGCGTGGGGACTTGCAAATAGCAAGCATCCATTT
TTGTGGATCGTTAGGCCCGACATAGTGATGGGGGATTCAGCCGTGTTGCCTGATGAGTTT
CTTGAAGAGATTAAAGACAGAGGATTATTAGCAAGCTGGTGCCCACAAGATCAAGTTCTT
TCCCACCCATCTATTGGCGTTTTTCTAACACATTGTGGATGGAACTCTACGATTGAAAGC
ATAAGTTCAGGAGTTCCTCTAATTTGCTGGCCATTCTTTGCTGAGCAGCAAACAAATTGT
CGATATGCGTGTGTAGAGTGGGGAATAGGTGTTGAGGTCAATAAAGACGTAAAGCGCCAA
GAAATCGAAGCAATTATCAATGATATGTTAGAAGGTGAAAAAGGTAAGGATTTGAAAGAC
AAGGCGTTGGAGTGGAAGAAGAAAGCAGCAGAAGCAACTGATATTGGAGGGTCTTCATGG
AAACACTTTGATACATTCTTGGAAAAACTTCTCCTTAGTAGGGAATAG