Plant GARDEN
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TOP > About the Species(Solanum tuberosum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400056076
CDS Infomation

pacid=37463507 polypeptide=PGSC0003DMP400037742 locus=PGSC0003DMG400021785 ID=PGSC0003DMT400056076.v4.03 annot-version=v4.03
Sequence

ATGGAGAAGAAGCCTCATGTAGTGTGTGTACCATTTCCTGCACAAGGTCATGTAATACCA
TTCATGAAATTAGCCAAAATTTTGCACTCAAGAGGTTTTTATGTAACATTTGTCAACACT
GAATATAACCATAAACGTCTAATCCGATCACAAGGCCCTGACTTTGTGAAAGGCTTCCAA
GATTTCCAATTTGATACTATCCCGGAAGGATTGCCACCATCAGATCGTGATGTAACTCAA
GATCCTGCTTCCTTATGTGACTCGATAAGGAAGAACTGCTTGACTCCTTTTCGGGATTTA
CTATCAAAGCTTATTTCATCACCGGTCATTCCACCAATTTCTTGTATAATATCAGATGGG
ATGATGAGCTTTGCCATTAAGGCAGCACAAGAATTTGGCATCCTTGATGTCCAATTTTGG
ACAGCCTCAGCTTGTGGTTATATGGGATACCTTCAATATGATGAACTAAGAAGAAGAGAG
ATTATCCCGTTTAAAGATAATAGTTTCATGGAGGATGGTACACTTGATACAATTGTCGAT
GAGATTCCAGGAATGAGAAACATTAGGTTGAAGGACTTGCCAAGCTTTATCATGACTACT
GATCCTGATGATATTCTGTTAAACTATTTAAGCGATGAAGCACAAAATTGCTTGAAATCT
TCTGCGATGATCATCAATACATTCACTGAATTGGAACGTGAAGTCCTGGAAGAGATTCAA
GCTAAATTCCCAAATATTTATGTTACAGGGCCACTTTCGTTGATGGAAAAAACCATCCCA
GAAAACGAATTGAGCTCATTTAGGCCAAGTTTATGGAAAGAAGAATTTCAATGTCTTGAG
TGGCTGAATAAACAGGAACCAAGTTCGGTAATCTTTGTGAGTTATGGATGTGTGACATTA
ATGTCAGACCATCACCTAAAAGAATTCGCGTGGGGACTTGCAAATAGCAAACACCCATTC
TTGTGGATCGTTAGGCCTGACATAGTGATGGGTGATTCAGCCGTGTTGCCTGATGAGTTT
CTTGTAGAGATTAAAGACAGAGGATTATTAGCAAGTTGGTGCCCACAAGATCAAGTACTT
TCCCACCCATCTATTGGCGTTTTTCTAACACATTGTGGATGGAACTCTACGATTGAAAGC
ATAAGTTCAGGAGTTCCTCTAATTTGCTGGCCATTCTTTGCTGAGCAGCAAACAAATTGT
AGATATGCTTGTGCAGAGTGGGGAATAGGTGTTGAGGTCAAACAAGATGTCAAGCGTCAA
GAAATCAAAGCAATTATTAAGGAAATGTTAGAAGGTGAAAGAAGTAAGGAGTTGAAAGAC
AAGGCGTTGGAGTGGAAGAAGAAAGCAGCAGAAGCAACTGATATTGGAGGGTCTTCATGG
AAACACTTTGATACATTATTGGAAAAACTTCTCCTTAACAAGGAATAG

Peptide Sequence

PEP ID

PGSC0003DMP400037742
PEP Infomation

pacid=37463507 transcript=PGSC0003DMT400056076 locus=PGSC0003DMG400021785 ID=PGSC0003DMT400056076.v4.03 annot-version=v4.03
Sequence

MEKKPHVVCVPFPAQGHVIPFMKLAKILHSRGFYVTFVNTEYNHKRLIRSQGPDFVKGFQ
DFQFDTIPEGLPPSDRDVTQDPASLCDSIRKNCLTPFRDLLSKLISSPVIPPISCIISDG
MMSFAIKAAQEFGILDVQFWTASACGYMGYLQYDELRRREIIPFKDNSFMEDGTLDTIVD
EIPGMRNIRLKDLPSFIMTTDPDDILLNYLSDEAQNCLKSSAMIINTFTELEREVLEEIQ
AKFPNIYVTGPLSLMEKTIPENELSSFRPSLWKEEFQCLEWLNKQEPSSVIFVSYGCVTL
MSDHHLKEFAWGLANSKHPFLWIVRPDIVMGDSAVLPDEFLVEIKDRGLLASWCPQDQVL
SHPSIGVFLTHCGWNSTIESISSGVPLICWPFFAEQQTNCRYACAEWGIGVEVKQDVKRQ
EIKAIIKEMLEGERSKELKDKALEWKKKAAEATDIGGSSWKHFDTLLEKLLLNKE*

Transcript Sequence

Transcript ID

PGSC0003DMT400056076
Transcript Infomation

pacid=37463507 locus=PGSC0003DMG400021785 ID=PGSC0003DMT400056076.v4.03 annot-version=v4.03
Sequence

ATGGAGAAGAAGCCTCATGTAGTGTGTGTACCATTTCCTGCACAAGGTCATGTAATACCA
TTCATGAAATTAGCCAAAATTTTGCACTCAAGAGGTTTTTATGTAACATTTGTCAACACT
GAATATAACCATAAACGTCTAATCCGATCACAAGGCCCTGACTTTGTGAAAGGCTTCCAA
GATTTCCAATTTGATACTATCCCGGAAGGATTGCCACCATCAGATCGTGATGTAACTCAA
GATCCTGCTTCCTTATGTGACTCGATAAGGAAGAACTGCTTGACTCCTTTTCGGGATTTA
CTATCAAAGCTTATTTCATCACCGGTCATTCCACCAATTTCTTGTATAATATCAGATGGG
ATGATGAGCTTTGCCATTAAGGCAGCACAAGAATTTGGCATCCTTGATGTCCAATTTTGG
ACAGCCTCAGCTTGTGGTTATATGGGATACCTTCAATATGATGAACTAAGAAGAAGAGAG
ATTATCCCGTTTAAAGATAATAGTTTCATGGAGGATGGTACACTTGATACAATTGTCGAT
GAGATTCCAGGAATGAGAAACATTAGGTTGAAGGACTTGCCAAGCTTTATCATGACTACT
GATCCTGATGATATTCTGTTAAACTATTTAAGCGATGAAGCACAAAATTGCTTGAAATCT
TCTGCGATGATCATCAATACATTCACTGAATTGGAACGTGAAGTCCTGGAAGAGATTCAA
GCTAAATTCCCAAATATTTATGTTACAGGGCCACTTTCGTTGATGGAAAAAACCATCCCA
GAAAACGAATTGAGCTCATTTAGGCCAAGTTTATGGAAAGAAGAATTTCAATGTCTTGAG
TGGCTGAATAAACAGGAACCAAGTTCGGTAATCTTTGTGAGTTATGGATGTGTGACATTA
ATGTCAGACCATCACCTAAAAGAATTCGCGTGGGGACTTGCAAATAGCAAACACCCATTC
TTGTGGATCGTTAGGCCTGACATAGTGATGGGTGATTCAGCCGTGTTGCCTGATGAGTTT
CTTGTAGAGATTAAAGACAGAGGATTATTAGCAAGTTGGTGCCCACAAGATCAAGTACTT
TCCCACCCATCTATTGGCGTTTTTCTAACACATTGTGGATGGAACTCTACGATTGAAAGC
ATAAGTTCAGGAGTTCCTCTAATTTGCTGGCCATTCTTTGCTGAGCAGCAAACAAATTGT
AGATATGCTTGTGCAGAGTGGGGAATAGGTGTTGAGGTCAAACAAGATGTCAAGCGTCAA
GAAATCAAAGCAATTATTAAGGAAATGTTAGAAGGTGAAAGAAGTAAGGAGTTGAAAGAC
AAGGCGTTGGAGTGGAAGAAGAAAGCAGCAGAAGCAACTGATATTGGAGGGTCTTCATGG
AAACACTTTGATACATTATTGGAAAAACTTCTCCTTAACAAGGAATAG