Plant GARDEN
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TOP > About the Species(Solanum tuberosum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400056069
CDS Infomation

pacid=37444893 polypeptide=PGSC0003DMP400037738 locus=PGSC0003DMG400021781 ID=PGSC0003DMT400056069.v4.03 annot-version=v4.03
Sequence

ATGATACCGGGTCGTTTACTTTCAGATAAGGACCGGGAACTCTCGGAAGCTCAAGCGGAG
ATCAAGGCATTACGGTTGTCGGAACGCCTACGAGAAAAGGCTGTTGAAGAGCTCACTGAT
GAGTTGACAAGGGTTGATGAGAAGCTCAAGTTGACAGAATCACTTCTAGAAAGCAAGAAT
CTTGAAATCAAGAAAATCAATGATGAGAAGAAAGCATCCATGGCAGCTCAATTTGCAGCG
GAAGCCACTCTTCGAAGGGTCCATGCTGCTCAAAAGGACGATGATATGCCGCCAATTGAG
GCCATCCTTGCGCCTTTGGAGGCTGAACTCAAACTTGCTCGTCATGAGACTGCGAAACTA
CAAGATGATAATAAGGCATTGGACCGTCTTACCAAGTCAAAAGAGGCAGCTTTACTTGAT
GCCGAAAGAACTGTGCAGTCAGCATTAGCAAAGGCGTCTATGGTGGATGACCTTCAGAAT
AAGAATCAAGAGCTGATGAAACAGATAGAAATATGCCAGGAAGAAAATAAAATTCTAGAC
AGAATGCATCGCCAAAAGGTTGCAGAGGTTGAAAAACTTACCCAAAGTGTGCGCGAGCTT
GAGGAGGCTGTTCTGGCTGGTGGTGCAGCTGCTAATGCTGTCCGGGATTACCAACGGAAG
GTTCAAGAAATGAATGAAGAAAGAAAAACACTTGACCGCGAGCTAGCACGTGCCAAGGTA
ACAGCTAATAGGGTAGCAACTGTGGTTGCTAATGAATGGAAAGATGCAAATGATAAAGTA
ATGCCCGTGAAACAGTGGCTTGAAGAGAGGAGGATTTTGCAGGGTGAGATGCAACAACTA
CGTGACAAGCTCGCAATCACTGAACGAACTGCAAAGTCAGAAGCCCTGTTGAAAGACAAA
TATCAATTGAGGCTCAAGGTCTTGGAAGAGACATTGAGACCATCAAGCACTAGCTCTCGC
AATACAACAGATGGCAGAAGTTCAAGCAATGGTCCTTCACGTCGGCAGTCACTTGGTGGA
GCTGAAAGTATCTCCAAATTGACCTCTAATGGCTTCTTACCAAAGAGATCACCATCATTT
CAGTTGAGATCTTCTGGGTCCAGTACTATTCTGAAGCATGCGAAAGGGACCTCAAAGTCA
TTTGATGGTGGCTCAAGATCATTGGACAGGGGTAAAAAACTTCTGAATGTAACAGGTCCA
AATTTCAATAGCAGCAAGTCTGTTGATGGAGCTAAGGATAATGAGACTGAGAGTACTTCT
TGGAAATCAAATCAAGATGAAAAACGCACCGACCTACCAGTAACCGAAACAGAAGATACT
GTGCCTGGACTACTATATGACTTACTGCAAAAAGAAGTAGTTGCTTTGAGGAAAGCTGGC
CATGAAAAGGATCAAAGTCTTAAAGACAAGGACGATGCCATTGAGATGTTAGCTAAGAAA
GTAGAGACTTTAACAAAAGCCATGGAAGTTGAGGCCAAAAAGATGAGAAGGGAGGTTTCT
GCCATGGAGAAAGAGGTGGCTGCTATGCGTGTCGAGAAAGAACAAGAAAATAGGGCAAAA
AGATTGGGAAATTCTAAGGGTCCAGTGAACAGTTCTCAGCTGCTACCTGGAAGGAGTGTA
ACACGAAGTGGGTTAACACGCACACAATAA

Peptide Sequence

PEP ID

PGSC0003DMP400037738
PEP Infomation

pacid=37444893 transcript=PGSC0003DMT400056069 locus=PGSC0003DMG400021781 ID=PGSC0003DMT400056069.v4.03 annot-version=v4.03
Sequence

MIPGRLLSDKDRELSEAQAEIKALRLSERLREKAVEELTDELTRVDEKLKLTESLLESKN
LEIKKINDEKKASMAAQFAAEATLRRVHAAQKDDDMPPIEAILAPLEAELKLARHETAKL
QDDNKALDRLTKSKEAALLDAERTVQSALAKASMVDDLQNKNQELMKQIEICQEENKILD
RMHRQKVAEVEKLTQSVRELEEAVLAGGAAANAVRDYQRKVQEMNEERKTLDRELARAKV
TANRVATVVANEWKDANDKVMPVKQWLEERRILQGEMQQLRDKLAITERTAKSEALLKDK
YQLRLKVLEETLRPSSTSSRNTTDGRSSSNGPSRRQSLGGAESISKLTSNGFLPKRSPSF
QLRSSGSSTILKHAKGTSKSFDGGSRSLDRGKKLLNVTGPNFNSSKSVDGAKDNETESTS
WKSNQDEKRTDLPVTETEDTVPGLLYDLLQKEVVALRKAGHEKDQSLKDKDDAIEMLAKK
VETLTKAMEVEAKKMRREVSAMEKEVAAMRVEKEQENRAKRLGNSKGPVNSSQLLPGRSV
TRSGLTRTQ*

Transcript Sequence

Transcript ID

PGSC0003DMT400056069
Transcript Infomation

pacid=37444893 locus=PGSC0003DMG400021781 ID=PGSC0003DMT400056069.v4.03 annot-version=v4.03
Sequence

ATGATACCGGGTCGTTTACTTTCAGATAAGGACCGGGAACTCTCGGAAGCTCAAGCGGAG
ATCAAGGCATTACGGTTGTCGGAACGCCTACGAGAAAAGGCTGTTGAAGAGCTCACTGAT
GAGTTGACAAGGGTTGATGAGAAGCTCAAGTTGACAGAATCACTTCTAGAAAGCAAGAAT
CTTGAAATCAAGAAAATCAATGATGAGAAGAAAGCATCCATGGCAGCTCAATTTGCAGCG
GAAGCCACTCTTCGAAGGGTCCATGCTGCTCAAAAGGACGATGATATGCCGCCAATTGAG
GCCATCCTTGCGCCTTTGGAGGCTGAACTCAAACTTGCTCGTCATGAGACTGCGAAACTA
CAAGATGATAATAAGGCATTGGACCGTCTTACCAAGTCAAAAGAGGCAGCTTTACTTGAT
GCCGAAAGAACTGTGCAGTCAGCATTAGCAAAGGCGTCTATGGTGGATGACCTTCAGAAT
AAGAATCAAGAGCTGATGAAACAGATAGAAATATGCCAGGAAGAAAATAAAATTCTAGAC
AGAATGCATCGCCAAAAGGTTGCAGAGGTTGAAAAACTTACCCAAAGTGTGCGCGAGCTT
GAGGAGGCTGTTCTGGCTGGTGGTGCAGCTGCTAATGCTGTCCGGGATTACCAACGGAAG
GTTCAAGAAATGAATGAAGAAAGAAAAACACTTGACCGCGAGCTAGCACGTGCCAAGGTA
ACAGCTAATAGGGTAGCAACTGTGGTTGCTAATGAATGGAAAGATGCAAATGATAAAGTA
ATGCCCGTGAAACAGTGGCTTGAAGAGAGGAGGATTTTGCAGGGTGAGATGCAACAACTA
CGTGACAAGCTCGCAATCACTGAACGAACTGCAAAGTCAGAAGCCCTGTTGAAAGACAAA
TATCAATTGAGGCTCAAGGTCTTGGAAGAGACATTGAGACCATCAAGCACTAGCTCTCGC
AATACAACAGATGGCAGAAGTTCAAGCAATGGTCCTTCACGTCGGCAGTCACTTGGTGGA
GCTGAAAGTATCTCCAAATTGACCTCTAATGGCTTCTTACCAAAGAGATCACCATCATTT
CAGTTGAGATCTTCTGGGTCCAGTACTATTCTGAAGCATGCGAAAGGGACCTCAAAGTCA
TTTGATGGTGGCTCAAGATCATTGGACAGGGGTAAAAAACTTCTGAATGTAACAGGTCCA
AATTTCAATAGCAGCAAGTCTGTTGATGGAGCTAAGGATAATGAGACTGAGAGTACTTCT
TGGAAATCAAATCAAGATGAAAAACGCACCGACCTACCAGTAACCGAAACAGAAGATACT
GTGCCTGGACTACTATATGACTTACTGCAAAAAGAAGTAGTTGCTTTGAGGAAAGCTGGC
CATGAAAAGGATCAAAGTCTTAAAGACAAGGACGATGCCATTGAGATGTTAGCTAAGAAA
GTAGAGACTTTAACAAAAGCCATGGAAGTTGAGGCCAAAAAGATGAGAAGGGAGGTTTCT
GCCATGGAGAAAGAGGTGGCTGCTATGCGTGTCGAGAAAGAACAAGAAAATAGGGCAAAA
AGATTGGGAAATTCTAAGGGTCCAGTGAACAGTTCTCAGCTGCTACCTGGAAGGAGTGTA
ACACGAAGTGGGTTAACACGCACACAATAA