Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400055920
CDS Infomation

pacid=37425241 polypeptide=PGSC0003DMP400037652 locus=PGSC0003DMG400021722 ID=PGSC0003DMT400055920.v4.03 annot-version=v4.03
Sequence

ATGGCGAAGAAGAAAGCAACCATGACTCTTAAAGACTTCCATGGTGGTTCTATTCCTTCA
GATCTTCCATTACCTTCTGCCCCTGGCGTAATGATAAGGCCATCAGATCGTGGTGGTTTT
GATCGCCAAGCATCATGGGGAAACCCCATGGGAAGGCCAGAGCATCGTTTACGTCCGGGA
TCAGCTGGTGCAACCAGAAACTTTGATGAGAAGACTCCTTTCTTAAGTAATAATGCACCA
ATAGGCCGTAATTTTGATGAGGATGAGAGGAAGCCATTGGATGGATCATCTGGACCTCGT
CGAACTGTTAGTGATGAGAGTATCCGTGCATTGCCAAGTCGTGTGGAGCCTAAGGCAGAA
TACTCTGTTACTGGGATGGTAGGTAGTGGGCAAGTATCAGCTCCTCCGTCTCAAAATCCT
AGAGGCGCAGCAAGTTGGTTCAATGAATCGACTAGTATGGGAGCGAGTACTAAAGGTTCT
GTTGGTGGTAGCGGCAGGAGCGTGAGTTCTCGGAATGTGTCTGCAAGTAGTACTCAAGTT
GTTGCTGGGTCTTACCCAAATGCATGGGGCCTAAGGAAGGAGGTGGCAAGTGCAAAGGAA
TCAGTTTCAGCTCCATGGTCTGCTCCTGATGCTGAGTCAAAGTTGGCCCATGCCAGTGCC
CTTGAGAAGGTCACATCTGGCAGGTGGCATTCAAAGCAGCAGATTCATTCTCAAATGGAT
GTTGAGGTTGTTAAGCATCAAGACACAGAGAAAGAATTATATTACCATGGAAGTACTACA
GTCAACGATAGTGTCTACAACATACCAGATGTCATGGGAGGACCCGAATATAGTGATCAG
GTGCTAGCGGTTCATGCTGAAAGAAATCTTGTTCTTACAGACGGGGTTCACGGGTTTAAC
AAGGAGTTACCAGCACGGGAGAGGGCCAGGTCCCCTTTATTCATGGAGGCAAATGAGAGA
AAAACTTCTTCTAATGTTACTGGGTTACAACGGCCCCATAATGTTGTTAGCTTTGGTGGA
TATGAGATGCAGTCACCAGCATCTTCTGAACCATCTGAGCGGCCCAAATTAAAGTTGCTA
CCAAGATCCAAACCATTGGAGAATCTGGAGCAGTCCATAGATTATAAGCAGGTCAACCAG
CAGCCAAGTAATCCTGTTCGTGTTGAGAAATTGGCTGATGCATATCCCACCATAGATCCC
ACCAAGACTGGGTTTGTTGAACATGAAAGAAGCAATCAAGTAACTGAACGCCCAAAATTG
AACTTGAAGCCTCGGTCACAACTTCTTGAACAATCGGAGGGAAACACAGAAAATAAAAGG
AAACCATTATTTGGCGGTGCTCGTCCACGTGAAATGGTACTGCAGAATCGCGGGATTGAT
GATGTTATGCATAATCATGACCTTCAGCAACCTCATCCTAGGGGCAAACAACATGCTGGC
AAAGCAGAGGCAGTTATGCATGCGACCAGACATAATGAGAAAACAGAGAGTATTCCGATT
GACCATAGGATGGCGAAGAACGCAGATAGGCGAGATCACAGGATAGATGTCGAGAAAGGA
GATGGGCAGAGGAGGAATTGGAGAAGCGAGAACTGGAGGAACAACAAGGAGACCGAAAGG
CAACACCACCACCACCATCAGCCGCAGCAACATGTACAGGAAAGGCCGCCCTCACCAGAA
ACGTGGCGCAAACCTGTTGAACCACCAAGACCTGCTTCTGCTGATGCTCCTGGTGCGAGG
TATGGAAAAGCAACCTCTGCAGTCGAGCTGGCTGCAGCCTTCTCAAAATCAGTCTCTGAT
CCAACAACAACAACTGATCGTTTTTCTGGTCAGAAAAGCCTTCCTAATCGAGGTCAAATC
CCTTTTTCTCGATTGACAGGCCCTCAGCAGAGGCCTCAGATTAATGGGTACTAA

Peptide Sequence

PEP ID

PGSC0003DMP400037652
PEP Infomation

pacid=37425241 transcript=PGSC0003DMT400055920 locus=PGSC0003DMG400021722 ID=PGSC0003DMT400055920.v4.03 annot-version=v4.03
Sequence

MAKKKATMTLKDFHGGSIPSDLPLPSAPGVMIRPSDRGGFDRQASWGNPMGRPEHRLRPG
SAGATRNFDEKTPFLSNNAPIGRNFDEDERKPLDGSSGPRRTVSDESIRALPSRVEPKAE
YSVTGMVGSGQVSAPPSQNPRGAASWFNESTSMGASTKGSVGGSGRSVSSRNVSASSTQV
VAGSYPNAWGLRKEVASAKESVSAPWSAPDAESKLAHASALEKVTSGRWHSKQQIHSQMD
VEVVKHQDTEKELYYHGSTTVNDSVYNIPDVMGGPEYSDQVLAVHAERNLVLTDGVHGFN
KELPARERARSPLFMEANERKTSSNVTGLQRPHNVVSFGGYEMQSPASSEPSERPKLKLL
PRSKPLENLEQSIDYKQVNQQPSNPVRVEKLADAYPTIDPTKTGFVEHERSNQVTERPKL
NLKPRSQLLEQSEGNTENKRKPLFGGARPREMVLQNRGIDDVMHNHDLQQPHPRGKQHAG
KAEAVMHATRHNEKTESIPIDHRMAKNADRRDHRIDVEKGDGQRRNWRSENWRNNKETER
QHHHHHQPQQHVQERPPSPETWRKPVEPPRPASADAPGARYGKATSAVELAAAFSKSVSD
PTTTTDRFSGQKSLPNRGQIPFSRLTGPQQRPQINGY*

Transcript Sequence

Transcript ID

PGSC0003DMT400055920
Transcript Infomation

pacid=37425241 locus=PGSC0003DMG400021722 ID=PGSC0003DMT400055920.v4.03 annot-version=v4.03
Sequence

ATGGCGAAGAAGAAAGCAACCATGACTCTTAAAGACTTCCATGGTGGTTCTATTCCTTCA
GATCTTCCATTACCTTCTGCCCCTGGCGTAATGATAAGGCCATCAGATCGTGGTGGTTTT
GATCGCCAAGCATCATGGGGAAACCCCATGGGAAGGCCAGAGCATCGTTTACGTCCGGGA
TCAGCTGGTGCAACCAGAAACTTTGATGAGAAGACTCCTTTCTTAAGTAATAATGCACCA
ATAGGCCGTAATTTTGATGAGGATGAGAGGAAGCCATTGGATGGATCATCTGGACCTCGT
CGAACTGTTAGTGATGAGAGTATCCGTGCATTGCCAAGTCGTGTGGAGCCTAAGGCAGAA
TACTCTGTTACTGGGATGGTAGGTAGTGGGCAAGTATCAGCTCCTCCGTCTCAAAATCCT
AGAGGCGCAGCAAGTTGGTTCAATGAATCGACTAGTATGGGAGCGAGTACTAAAGGTTCT
GTTGGTGGTAGCGGCAGGAGCGTGAGTTCTCGGAATGTGTCTGCAAGTAGTACTCAAGTT
GTTGCTGGGTCTTACCCAAATGCATGGGGCCTAAGGAAGGAGGTGGCAAGTGCAAAGGAA
TCAGTTTCAGCTCCATGGTCTGCTCCTGATGCTGAGTCAAAGTTGGCCCATGCCAGTGCC
CTTGAGAAGGTCACATCTGGCAGGTGGCATTCAAAGCAGCAGATTCATTCTCAAATGGAT
GTTGAGGTTGTTAAGCATCAAGACACAGAGAAAGAATTATATTACCATGGAAGTACTACA
GTCAACGATAGTGTCTACAACATACCAGATGTCATGGGAGGACCCGAATATAGTGATCAG
GTGCTAGCGGTTCATGCTGAAAGAAATCTTGTTCTTACAGACGGGGTTCACGGGTTTAAC
AAGGAGTTACCAGCACGGGAGAGGGCCAGGTCCCCTTTATTCATGGAGGCAAATGAGAGA
AAAACTTCTTCTAATGTTACTGGGTTACAACGGCCCCATAATGTTGTTAGCTTTGGTGGA
TATGAGATGCAGTCACCAGCATCTTCTGAACCATCTGAGCGGCCCAAATTAAAGTTGCTA
CCAAGATCCAAACCATTGGAGAATCTGGAGCAGTCCATAGATTATAAGCAGGTCAACCAG
CAGCCAAGTAATCCTGTTCGTGTTGAGAAATTGGCTGATGCATATCCCACCATAGATCCC
ACCAAGACTGGGTTTGTTGAACATGAAAGAAGCAATCAAGTAACTGAACGCCCAAAATTG
AACTTGAAGCCTCGGTCACAACTTCTTGAACAATCGGAGGGAAACACAGAAAATAAAAGG
AAACCATTATTTGGCGGTGCTCGTCCACGTGAAATGGTACTGCAGAATCGCGGGATTGAT
GATGTTATGCATAATCATGACCTTCAGCAACCTCATCCTAGGGGCAAACAACATGCTGGC
AAAGCAGAGGCAGTTATGCATGCGACCAGACATAATGAGAAAACAGAGAGTATTCCGATT
GACCATAGGATGGCGAAGAACGCAGATAGGCGAGATCACAGGATAGATGTCGAGAAAGGA
GATGGGCAGAGGAGGAATTGGAGAAGCGAGAACTGGAGGAACAACAAGGAGACCGAAAGG
CAACACCACCACCACCATCAGCCGCAGCAACATGTACAGGAAAGGCCGCCCTCACCAGAA
ACGTGGCGCAAACCTGTTGAACCACCAAGACCTGCTTCTGCTGATGCTCCTGGTGCGAGG
TATGGAAAAGCAACCTCTGCAGTCGAGCTGGCTGCAGCCTTCTCAAAATCAGTCTCTGAT
CCAACAACAACAACTGATCGTTTTTCTGGTCAGAAAAGCCTTCCTAATCGAGGTCAAATC
CCTTTTTCTCGATTGACAGGCCCTCAGCAGAGGCCTCAGATTAATGGGTACTAA