Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400055915
CDS Infomation

pacid=37427508 polypeptide=PGSC0003DMP400037649 locus=PGSC0003DMG400021720 ID=PGSC0003DMT400055915.v4.03 annot-version=v4.03
Sequence

ATGTTGGAGAAGATCGGTTTACCTTCAAAACCATCACTCAGAGGGAATAATTGGGTAGTT
GATGCTTCTCATTGCCAAGGATGTTCTTCTCAGTTCACTTTCATCAATCGCAAGCATCAT
TGCCGGAGGTGCGGGGGCATTTTCTGCAATAGCTGTACCCAGCAAAGAATGGTGCTACGT
GGACAAGGTGATTCACCGGTGCGTATTTGTGAACCATGCAAAAGATTAGAAGAGGCTGCA
CGATTTGAATTGCGATATGGTCAAAAAAGTAGAGCGTCAAAAGGGAGCTCAAGACTTGCA
TCAAAGAGTGAGGATGAAGTTTTAAATCAGCTTCTGGGTAAAGAAAGGACCTCAGATGTT
CTTTCCCATGATCAACAGTCAGCAAGCACTGCATCAGGTTCAAATGTTCTAGATTTCTCT
GGTAAAGATGAGGCTGGAGATGGAAGCAGTAATCAGACAGAGCAGCAGGCTGAGATGGGT
TCCACTACTCCTGAAGAATTACGTCAGCAAGCCATGGAAGAAAAACAGAATCACCGAACT
CTAAAAGCTGCAGGTAAACCTGAAGAGGCTCTAAGGGCTTTTAAGAGGGGCAAAGAACTT
GAAAGGCAGGCTGCTGCTTTGGAGATTTCTCTGAGAAAAAATCGTAAAAGAGCATTGTCG
TCCAGTAATGTCACCGAGATCCAGCAAGATAATGATGCTGGCAAAGCATCTGGTAGGAAA
AATAAGCTCTCTCCTCAAATTACCGAAGAGAAGGATGATCTTGCTTCTGAACTCAGAGAT
CTGGGATGGTCAGATATGGATCTTCGTACTGCTGACAAAAGGCCAGCAACCATGAGCCTT
GAGGGTGAACTTTCTGTGCTTCTTGGAGAAGTTTCTGGAAAGACTAATCCTGAAAAGAAA
ATTCATGGAATGGACAAGTCACTGGTCATTGCTCATAAGAAAAAAGCAATCCAGCTGAAG
CGGGAAGGGAAACTTGCTGAAGCCAAAGAAGAATTGAAGAAGGCTAAAATTCTTGAAAAG
CAAATAGAAGAGCAGGAACTGTTGGGTGATGATGAAGATTCTGATGATGAGCTTTCTTCT
TTAATACGTGGGCTGGATACTGATAAATTTGATGATTTATCCGCTGGACATAAACCAGAT
TCTAGTTATGATTTTGACAACCTTCTTGGAACTGCTGATGATATTGGTACAGATGGTAAT
TTTGAAGTAACTGATGATGATATGTATGACCCAGAAATAGCAGCTGCCTTGGAGTCAATG
GGCTGGACTGAAGATGCCGCCGAATCTGAGGTTTCAGAAAAGCAATTCAAACCTGTTGAT
AGGGAAGTGCTACGAAGTGAAATTCAGTCTCTGAAAAGAGAAGCCGTTAACCAGAAAAGG
GCTGGTAAAACTAAGGAGGCAATGGAACTGCTGAAGAGGGCAAAAACACTGGAGAGTGAG
CTTGAAGAACAACTAAGTAATGGTGAAGAGGATGTAAGAAAGTTCGTTGAAAGAAAGGAT
AAAGAGCACAAAGTAGCACCAAAGAGTAAGTCTGTGATCCAGAGAGAACTTCTTGGTATT
AAAAAGAAGGCTCTTGCTTTAAGAAGGGAGGGAAGGTTAGATGAGGCTGAAGAAGAACTG
GAAAGAGGCAAGATTCTTGAGAAGCAACTTGAAGATATTGATAATCCACCAAAATTTGTG
CAGCCTATTGCTGGGAATAAGCGTGATGAAAGTATTGCAGATATTGATGCTGGAGATGAA
GATGCAGAGGTTACAGATCAAGATATGCATGACCCAACTTATCTTTCACTGCTTAATAAT
TTGGGCTGGCAGGATGATGAAAAAGCTAATGTTCCATCTGTGTCATTTCAAGGGAAAAAT
AATGTTTCTCATCTTAGCGAGTCCCTAACTAAGGAAGCTATGAGTAACATCCAAACTCGA
GCATCTAAAAAAAGTAAAGGTGAAATCCAGAGGGAACTTCTGGGCTTGAAACGGAAGACT
CTCACATTAAGACGCCAAGGAGAGACTGAGGAGGCAGAGGAATTGATGAATGCGGCTAAA
ATGTTAGAAGAACAGTTGGCTGAAATTGAAGAATCTATGTCTAACCCAACTAAGTCAAAT
GAGCAGAAAGAACGTATAGCTATTGATTCTCCCCATGAGAACCCACAGTTTCCACCATCA
GATTCACGGAAGAGTCCGATTGAGGATATGGAAAGTAAAGTTACATGTACTCTGGAGAAA
CCAGAAGAGGTCTCTCAATCAGATGAGAAACCATGCATCTCTGAGTCAAAAACTGCCGAG
GAAGTTAATTCTCAGCTTGATCAAAATTCCCTTCGTCAAGATATTCTGGTTCGCAAGAGG
AAAGCAGTTGCATTGAAGCGAGAAGGGAAAGTGGCAGAAGCCAAGGAGGAACTTCGACAG
GCAAAACTCTTAGAGAAGCACCTTGAGGAGGAAAAGACTCTGGGTAGTAGTAGTTCCACA
GTCTCAGCAGGTCCTAATACTTCACATGTTGGACAAAATGAAGTTAGCCCAAACAAAGTA
CCTCATATATCTCAAGTAGGACAGAAAGAAGTAAGTCCCAGCTCAGGTCCAAAGCCATTG
TCTGGACGTGATCGGTTTAAATTACAGCAACAGTCTCTCAGCCACAAACGACAAGCACTT
AAGTTGCGAAGGGAAGGTAGGACAGAAGAAGCTGATGCAGAATTTGAATTGGCAAAAGCT
ATTGAGAGCCAGTTGGAAGAAGCGTCTTCCCAAGGTACAATGCAGTCTTCTGACCCCACA
GGTGAATCAGCAGAGGGTGTCAGTGTTGAGGATTTTCTTGATCCTCAGCTTTTCTCTGCT
TTAAAAGCAATTGGAATTGCAGATACCTTTGTTGTACCCCGTGGCCCGGAAAGGCAGGAA
ACGAAAAAACCTATAACTGGTGATACTGATAAAACTGGCACTATTGCCTCTCAAATCCTT
GAAAGATCAGAGCCAAAACTATCTGAAGCACGTGTATCTGATGAAACTTCCAATGAGAGA
AAGCAGTTGGAAGAGCGGGTAAAGGCAGAGAAATTAAAGGCATTAAACTTGAAACGTTCT
GGAAAGCAGGCAGAGGCCTTGGACGCCCTTCGACGGGCTAAGATGTTTGAGAAGAAGTTG
AACGCTTTAGCTTCATAA

Peptide Sequence

PEP ID

PGSC0003DMP400037649
PEP Infomation

pacid=37427508 transcript=PGSC0003DMT400055915 locus=PGSC0003DMG400021720 ID=PGSC0003DMT400055915.v4.03 annot-version=v4.03
Sequence

MLEKIGLPSKPSLRGNNWVVDASHCQGCSSQFTFINRKHHCRRCGGIFCNSCTQQRMVLR
GQGDSPVRICEPCKRLEEAARFELRYGQKSRASKGSSRLASKSEDEVLNQLLGKERTSDV
LSHDQQSASTASGSNVLDFSGKDEAGDGSSNQTEQQAEMGSTTPEELRQQAMEEKQNHRT
LKAAGKPEEALRAFKRGKELERQAAALEISLRKNRKRALSSSNVTEIQQDNDAGKASGRK
NKLSPQITEEKDDLASELRDLGWSDMDLRTADKRPATMSLEGELSVLLGEVSGKTNPEKK
IHGMDKSLVIAHKKKAIQLKREGKLAEAKEELKKAKILEKQIEEQELLGDDEDSDDELSS
LIRGLDTDKFDDLSAGHKPDSSYDFDNLLGTADDIGTDGNFEVTDDDMYDPEIAAALESM
GWTEDAAESEVSEKQFKPVDREVLRSEIQSLKREAVNQKRAGKTKEAMELLKRAKTLESE
LEEQLSNGEEDVRKFVERKDKEHKVAPKSKSVIQRELLGIKKKALALRREGRLDEAEEEL
ERGKILEKQLEDIDNPPKFVQPIAGNKRDESIADIDAGDEDAEVTDQDMHDPTYLSLLNN
LGWQDDEKANVPSVSFQGKNNVSHLSESLTKEAMSNIQTRASKKSKGEIQRELLGLKRKT
LTLRRQGETEEAEELMNAAKMLEEQLAEIEESMSNPTKSNEQKERIAIDSPHENPQFPPS
DSRKSPIEDMESKVTCTLEKPEEVSQSDEKPCISESKTAEEVNSQLDQNSLRQDILVRKR
KAVALKREGKVAEAKEELRQAKLLEKHLEEEKTLGSSSSTVSAGPNTSHVGQNEVSPNKV
PHISQVGQKEVSPSSGPKPLSGRDRFKLQQQSLSHKRQALKLRREGRTEEADAEFELAKA
IESQLEEASSQGTMQSSDPTGESAEGVSVEDFLDPQLFSALKAIGIADTFVVPRGPERQE
TKKPITGDTDKTGTIASQILERSEPKLSEARVSDETSNERKQLEERVKAEKLKALNLKRS
GKQAEALDALRRAKMFEKKLNALAS*

Transcript Sequence

Transcript ID

PGSC0003DMT400055915
Transcript Infomation

pacid=37427508 locus=PGSC0003DMG400021720 ID=PGSC0003DMT400055915.v4.03 annot-version=v4.03
Sequence

ATGTTGGAGAAGATCGGTTTACCTTCAAAACCATCACTCAGAGGGAATAATTGGGTAGTT
GATGCTTCTCATTGCCAAGGATGTTCTTCTCAGTTCACTTTCATCAATCGCAAGCATCAT
TGCCGGAGGTGCGGGGGCATTTTCTGCAATAGCTGTACCCAGCAAAGAATGGTGCTACGT
GGACAAGGTGATTCACCGGTGCGTATTTGTGAACCATGCAAAAGATTAGAAGAGGCTGCA
CGATTTGAATTGCGATATGGTCAAAAAAGTAGAGCGTCAAAAGGGAGCTCAAGACTTGCA
TCAAAGAGTGAGGATGAAGTTTTAAATCAGCTTCTGGGTAAAGAAAGGACCTCAGATGTT
CTTTCCCATGATCAACAGTCAGCAAGCACTGCATCAGGTTCAAATGTTCTAGATTTCTCT
GGTAAAGATGAGGCTGGAGATGGAAGCAGTAATCAGACAGAGCAGCAGGCTGAGATGGGT
TCCACTACTCCTGAAGAATTACGTCAGCAAGCCATGGAAGAAAAACAGAATCACCGAACT
CTAAAAGCTGCAGGTAAACCTGAAGAGGCTCTAAGGGCTTTTAAGAGGGGCAAAGAACTT
GAAAGGCAGGCTGCTGCTTTGGAGATTTCTCTGAGAAAAAATCGTAAAAGAGCATTGTCG
TCCAGTAATGTCACCGAGATCCAGCAAGATAATGATGCTGGCAAAGCATCTGGTAGGAAA
AATAAGCTCTCTCCTCAAATTACCGAAGAGAAGGATGATCTTGCTTCTGAACTCAGAGAT
CTGGGATGGTCAGATATGGATCTTCGTACTGCTGACAAAAGGCCAGCAACCATGAGCCTT
GAGGGTGAACTTTCTGTGCTTCTTGGAGAAGTTTCTGGAAAGACTAATCCTGAAAAGAAA
ATTCATGGAATGGACAAGTCACTGGTCATTGCTCATAAGAAAAAAGCAATCCAGCTGAAG
CGGGAAGGGAAACTTGCTGAAGCCAAAGAAGAATTGAAGAAGGCTAAAATTCTTGAAAAG
CAAATAGAAGAGCAGGAACTGTTGGGTGATGATGAAGATTCTGATGATGAGCTTTCTTCT
TTAATACGTGGGCTGGATACTGATAAATTTGATGATTTATCCGCTGGACATAAACCAGAT
TCTAGTTATGATTTTGACAACCTTCTTGGAACTGCTGATGATATTGGTACAGATGGTAAT
TTTGAAGTAACTGATGATGATATGTATGACCCAGAAATAGCAGCTGCCTTGGAGTCAATG
GGCTGGACTGAAGATGCCGCCGAATCTGAGGTTTCAGAAAAGCAATTCAAACCTGTTGAT
AGGGAAGTGCTACGAAGTGAAATTCAGTCTCTGAAAAGAGAAGCCGTTAACCAGAAAAGG
GCTGGTAAAACTAAGGAGGCAATGGAACTGCTGAAGAGGGCAAAAACACTGGAGAGTGAG
CTTGAAGAACAACTAAGTAATGGTGAAGAGGATGTAAGAAAGTTCGTTGAAAGAAAGGAT
AAAGAGCACAAAGTAGCACCAAAGAGTAAGTCTGTGATCCAGAGAGAACTTCTTGGTATT
AAAAAGAAGGCTCTTGCTTTAAGAAGGGAGGGAAGGTTAGATGAGGCTGAAGAAGAACTG
GAAAGAGGCAAGATTCTTGAGAAGCAACTTGAAGATATTGATAATCCACCAAAATTTGTG
CAGCCTATTGCTGGGAATAAGCGTGATGAAAGTATTGCAGATATTGATGCTGGAGATGAA
GATGCAGAGGTTACAGATCAAGATATGCATGACCCAACTTATCTTTCACTGCTTAATAAT
TTGGGCTGGCAGGATGATGAAAAAGCTAATGTTCCATCTGTGTCATTTCAAGGGAAAAAT
AATGTTTCTCATCTTAGCGAGTCCCTAACTAAGGAAGCTATGAGTAACATCCAAACTCGA
GCATCTAAAAAAAGTAAAGGTGAAATCCAGAGGGAACTTCTGGGCTTGAAACGGAAGACT
CTCACATTAAGACGCCAAGGAGAGACTGAGGAGGCAGAGGAATTGATGAATGCGGCTAAA
ATGTTAGAAGAACAGTTGGCTGAAATTGAAGAATCTATGTCTAACCCAACTAAGTCAAAT
GAGCAGAAAGAACGTATAGCTATTGATTCTCCCCATGAGAACCCACAGTTTCCACCATCA
GATTCACGGAAGAGTCCGATTGAGGATATGGAAAGTAAAGTTACATGTACTCTGGAGAAA
CCAGAAGAGGTCTCTCAATCAGATGAGAAACCATGCATCTCTGAGTCAAAAACTGCCGAG
GAAGTTAATTCTCAGCTTGATCAAAATTCCCTTCGTCAAGATATTCTGGTTCGCAAGAGG
AAAGCAGTTGCATTGAAGCGAGAAGGGAAAGTGGCAGAAGCCAAGGAGGAACTTCGACAG
GCAAAACTCTTAGAGAAGCACCTTGAGGAGGAAAAGACTCTGGGTAGTAGTAGTTCCACA
GTCTCAGCAGGTCCTAATACTTCACATGTTGGACAAAATGAAGTTAGCCCAAACAAAGTA
CCTCATATATCTCAAGTAGGACAGAAAGAAGTAAGTCCCAGCTCAGGTCCAAAGCCATTG
TCTGGACGTGATCGGTTTAAATTACAGCAACAGTCTCTCAGCCACAAACGACAAGCACTT
AAGTTGCGAAGGGAAGGTAGGACAGAAGAAGCTGATGCAGAATTTGAATTGGCAAAAGCT
ATTGAGAGCCAGTTGGAAGAAGCGTCTTCCCAAGGTACAATGCAGTCTTCTGACCCCACA
GGTGAATCAGCAGAGGGTGTCAGTGTTGAGGATTTTCTTGATCCTCAGCTTTTCTCTGCT
TTAAAAGCAATTGGAATTGCAGATACCTTTGTTGTACCCCGTGGCCCGGAAAGGCAGGAA
ACGAAAAAACCTATAACTGGTGATACTGATAAAACTGGCACTATTGCCTCTCAAATCCTT
GAAAGATCAGAGCCAAAACTATCTGAAGCACGTGTATCTGATGAAACTTCCAATGAGAGA
AAGCAGTTGGAAGAGCGGGTAAAGGCAGAGAAATTAAAGGCATTAAACTTGAAACGTTCT
GGAAAGCAGGCAGAGGCCTTGGACGCCCTTCGACGGGCTAAGATGTTTGAGAAGAAGTTG
AACGCTTTAGCTTCATAA