Plant GARDEN
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TOP > About the Species(Solanum tuberosum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400055889
CDS Infomation

pacid=37424260 polypeptide=PGSC0003DMP400037639 locus=PGSC0003DMG400021712 ID=PGSC0003DMT400055889.v4.03 annot-version=v4.03
Sequence

ATGTCTTCTTCTTCTTCCGTTTATCGCCGGCTTCACGGAATCTTCACCGGGAAACACAAA
GTCAGTGTAAAGCTGAAAACTGAACAGCCCCAAACAACTTCCACCAAACCCACATCCAAA
CTTCCTGAAAAACATAAACTTCAAACCATTGTTGACAACTTCAAAAAATCATCTGAATCT
CCTGAATTCCGAAACCGTTGCACCAACTATACGACCGCTATTCGCCGCCTTGAATTCAAT
TCTTCCGCTATCGAAGACATTTTTGAGCACCAAAAACAATACCCAGAAATTAGCAATGAG
TTCTTTGTCTGCCGTCTCATACTCTTATATGGTACAGCAAAAATGCATGAACATGCCCGT
AAACTGTTCGACGAAATGCCGAACCTAAAATGTCAACGAACAGTCTTTTCTTTCAATGCC
CTTTTGGAGGCCTACTCAAGGGCAGAGAAGTACGATATAATCAGAGATTTGTTTCGTGAA
TTACCTGGGGAGCTATCGATAGAGCCTGATGTAGTGTCTTATAATACTTTGATTAAGGCA
TTATGGAAAGCTGGTTCTTTGGATTCTTCTCTCAGTGTAATGGATGAGATGGAAAATCAC
GGAATTATACCTGATAAAGTGACTTTCAATACGCTTTCGAACGCATATTATGAAAGTAAA
AAGTTTTCTGAAGCCGAAGATTTGTGGGTATTGATGCAAAAGAAGAATGTTGATGCTGAC
TTGGGGAGTTACACCGTTAGATTACAAGGATTGGTTGCTAATAACCAGGTTAGCGAGGCG
ATTGAACTGTTTGAGGAGATGGGGAAGAAAGACATCATCCCAAAAGCTTTCAGTTATAAC
ATTATGATCAAAATGTATGTGGATGATAGGAACTGGGAAGAGGCAAGAAGATGGTATGTG
AAAATGGTGGAAAATGGACGTTATCCGGATAATGCAACATTTGAGATGCTCATTTCTTTT
GCTTGTGACAAGGATAATCTTGATTTTGCGCTTGAATTGTGTAAGAAAGCTATTGCTTCA
AAAGTTGCTATTTATAATGCAACAATGCAGAGGGTAGTCAATGTCTTGGCTGAGCATTCC
AAGCTTGAAGATGCACAGGAGCTGGTGAACTTGGCCAAATCATATAAGCTATTCCACTCC
CGACCCCGATCCCGGTATAAACTTTCGCTGCCTTCTCTTTAA

Peptide Sequence

PEP ID

PGSC0003DMP400037639
PEP Infomation

pacid=37424260 transcript=PGSC0003DMT400055889 locus=PGSC0003DMG400021712 ID=PGSC0003DMT400055889.v4.03 annot-version=v4.03
Sequence

MSSSSSVYRRLHGIFTGKHKVSVKLKTEQPQTTSTKPTSKLPEKHKLQTIVDNFKKSSES
PEFRNRCTNYTTAIRRLEFNSSAIEDIFEHQKQYPEISNEFFVCRLILLYGTAKMHEHAR
KLFDEMPNLKCQRTVFSFNALLEAYSRAEKYDIIRDLFRELPGELSIEPDVVSYNTLIKA
LWKAGSLDSSLSVMDEMENHGIIPDKVTFNTLSNAYYESKKFSEAEDLWVLMQKKNVDAD
LGSYTVRLQGLVANNQVSEAIELFEEMGKKDIIPKAFSYNIMIKMYVDDRNWEEARRWYV
KMVENGRYPDNATFEMLISFACDKDNLDFALELCKKAIASKVAIYNATMQRVVNVLAEHS
KLEDAQELVNLAKSYKLFHSRPRSRYKLSLPSL*

Transcript Sequence

Transcript ID

PGSC0003DMT400055889
Transcript Infomation

pacid=37424260 locus=PGSC0003DMG400021712 ID=PGSC0003DMT400055889.v4.03 annot-version=v4.03
Sequence

ATGTCTTCTTCTTCTTCCGTTTATCGCCGGCTTCACGGAATCTTCACCGGGAAACACAAA
GTCAGTGTAAAGCTGAAAACTGAACAGCCCCAAACAACTTCCACCAAACCCACATCCAAA
CTTCCTGAAAAACATAAACTTCAAACCATTGTTGACAACTTCAAAAAATCATCTGAATCT
CCTGAATTCCGAAACCGTTGCACCAACTATACGACCGCTATTCGCCGCCTTGAATTCAAT
TCTTCCGCTATCGAAGACATTTTTGAGCACCAAAAACAATACCCAGAAATTAGCAATGAG
TTCTTTGTCTGCCGTCTCATACTCTTATATGGTACAGCAAAAATGCATGAACATGCCCGT
AAACTGTTCGACGAAATGCCGAACCTAAAATGTCAACGAACAGTCTTTTCTTTCAATGCC
CTTTTGGAGGCCTACTCAAGGGCAGAGAAGTACGATATAATCAGAGATTTGTTTCGTGAA
TTACCTGGGGAGCTATCGATAGAGCCTGATGTAGTGTCTTATAATACTTTGATTAAGGCA
TTATGGAAAGCTGGTTCTTTGGATTCTTCTCTCAGTGTAATGGATGAGATGGAAAATCAC
GGAATTATACCTGATAAAGTGACTTTCAATACGCTTTCGAACGCATATTATGAAAGTAAA
AAGTTTTCTGAAGCCGAAGATTTGTGGGTATTGATGCAAAAGAAGAATGTTGATGCTGAC
TTGGGGAGTTACACCGTTAGATTACAAGGATTGGTTGCTAATAACCAGGTTAGCGAGGCG
ATTGAACTGTTTGAGGAGATGGGGAAGAAAGACATCATCCCAAAAGCTTTCAGTTATAAC
ATTATGATCAAAATGTATGTGGATGATAGGAACTGGGAAGAGGCAAGAAGATGGTATGTG
AAAATGGTGGAAAATGGACGTTATCCGGATAATGCAACATTTGAGATGCTCATTTCTTTT
GCTTGTGACAAGGATAATCTTGATTTTGCGCTTGAATTGTGTAAGAAAGCTATTGCTTCA
AAAGTTGCTATTTATAATGCAACAATGCAGAGGGTAGTCAATGTCTTGGCTGAGCATTCC
AAGCTTGAAGATGCACAGGAGCTGGTGAACTTGGCCAAATCATATAAGCTATTCCACTCC
CGACCCCGATCCCGGTATAAACTTTCGCTGCCTTCTCTTTAA