Plant GARDEN
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TOP > About the Species(Solanum tuberosum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400055809
CDS Infomation

pacid=37479921 polypeptide=PGSC0003DMP400037585 locus=PGSC0003DMG400021676 ID=PGSC0003DMT400055809.v4.03 annot-version=v4.03
Sequence

ATGGAACCATCAGTAGATAAGTCCAATTATTGCACTGACACTGATGAGATGATCAATTGG
TTCGAGAAATCCGCCGAAAATGCTGTCGCTGTACAGCGGCAGACGCTTCGGCGGATTCTT
GAACTCAACCATGGTGTTGAATACCTAAAAAAATGGCTTGGAGATATTAGACTTCAAGAT
GAAAATGCTATGGAATCACTTTATGCTACTATGGTTCCTCTTGCTTCTCATGCAGATTTT
GAGCCTTATATACATAGAATTGCTGATGGTGAAAAAGCTCCTTTACTTACTCAAGACCCT
ATGAAAACTTTATCCTTAAGTTCTGGAACCACAGAGGGAAGACAGAAATTTGTACCATTT
ACTCGCCATAGTTCCCAAACAACTCTTCAAATTTTCAAATTGGCAGCAGCTTATAGATCA
AGGATTTATTCAATAAGAGAAGGTGGAAAAGTTCTTGAATTTATATATAGCAGCAAACAA
TACAAAACAAAAGGGGGATTAATAGCAGGAACAGCCACAACACATTATTATGCTAGTGAA
GAATTCAAGATTAAACAACAACACACAAAATCTTTTACTTGTAGCCCTGAGGAAGTTATT
TCAAGTGGAGATTATAAACAATCAACATATTGTCATCTCCTTCTTGGCTTATATTATTGT
GATGAAATTGAATTTGTGACATCAACTTTTGCATATAGTATAGTTCAAGCATTCAGATCA
TTTGAAGAGTTGTGGAAGGAATTGTGCCATGATATAAGAGAAGGTACTCTTAGTTCAAGA
ATCAACATAACCAAAGTACAAAAAGTCGTCTTAGATATCATTGTCCCTAATCCAGAGCTG
GCATCAAGAATTGAATCAATATGTGAAGAAGTAGAAAGGGAAGATTGGTTTAGTATAATC
CCAAAATTATGGCCAAATGTTAAATATGTTTACACAATAATGACAGGCTCAATGCAACCA
TACTTAAACAAATTGAGACATTATGGTGGGAATTTGCCTTTGGTTAGTGCTGATTATGGG
TCCACAGAGAGTTGGATTGGAGTGAATGTGGAACCTTCATCTCCACCAGAGAAAGTAACT
TTTGCAATTATACCCACTTTTTCTTACTTTGAATTCATACCACTACATAGAAGTAAGTCA
CAAAGTTACAATAATAGCCACCAAGATGCTAATCTTCTAGCAAATGATGATTTTATTGAA
GATGAGCCTGTTCCCTTATCTCAAGTCAAGATAGGACAAGAGTATGAAATTGTCCTCACT
ACTTTCACAGGTCTTTATCGATATAGACTAGGGGATGTAGTAGAAGTTGCCGGTTTTCAC
AAGAAGACCCCCAAACTCAACTTTATATGCAGGAGAAAGCTGATATTAACAGTAAATATC
GATAAGAATACTGAACAAGACCTCCAGTTAGTGGTGGGGAGAGGTTCTCGAATACTAATA
AGCAAGTCAAGAGCTGAGCTAGTAGACTTCACAAGCCATGCAAATGTATCAAAAAAACCA
GGCCATTATGTGATCTATTGGGAAATCAAAGGAGATGTTGATGAAAATGTTCTTGGAGAG
TGTTGTACGGAAATGGATGCTTCTTTTGTTGATCATGGATATGTTGTATCAAGAAAAACC
AATTCAATTGGACCATTGGAACTTTGCATTGTGGAAAGAGGTACTTTTAAGAAGATTTTG
GAACATTTTATTGGAAATGGAGCAGCATTGAGCCAATTTAAGACTCCTAGATGCACTAGT
AACCAAAACCTATTAAGAATCCTTAATGTATGTACCATTAAAAGGTTTTATAGCACAGCC
TATATGGGTGATAGAATGTTTGTAACATAA

Peptide Sequence

PEP ID

PGSC0003DMP400037585
PEP Infomation

pacid=37479921 transcript=PGSC0003DMT400055809 locus=PGSC0003DMG400021676 ID=PGSC0003DMT400055809.v4.03 annot-version=v4.03
Sequence

MEPSVDKSNYCTDTDEMINWFEKSAENAVAVQRQTLRRILELNHGVEYLKKWLGDIRLQD
ENAMESLYATMVPLASHADFEPYIHRIADGEKAPLLTQDPMKTLSLSSGTTEGRQKFVPF
TRHSSQTTLQIFKLAAAYRSRIYSIREGGKVLEFIYSSKQYKTKGGLIAGTATTHYYASE
EFKIKQQHTKSFTCSPEEVISSGDYKQSTYCHLLLGLYYCDEIEFVTSTFAYSIVQAFRS
FEELWKELCHDIREGTLSSRINITKVQKVVLDIIVPNPELASRIESICEEVEREDWFSII
PKLWPNVKYVYTIMTGSMQPYLNKLRHYGGNLPLVSADYGSTESWIGVNVEPSSPPEKVT
FAIIPTFSYFEFIPLHRSKSQSYNNSHQDANLLANDDFIEDEPVPLSQVKIGQEYEIVLT
TFTGLYRYRLGDVVEVAGFHKKTPKLNFICRRKLILTVNIDKNTEQDLQLVVGRGSRILI
SKSRAELVDFTSHANVSKKPGHYVIYWEIKGDVDENVLGECCTEMDASFVDHGYVVSRKT
NSIGPLELCIVERGTFKKILEHFIGNGAALSQFKTPRCTSNQNLLRILNVCTIKRFYSTA
YMGDRMFVT*

Transcript Sequence

Transcript ID

PGSC0003DMT400055809
Transcript Infomation

pacid=37479921 locus=PGSC0003DMG400021676 ID=PGSC0003DMT400055809.v4.03 annot-version=v4.03
Sequence

ATGGAACCATCAGTAGATAAGTCCAATTATTGCACTGACACTGATGAGATGATCAATTGG
TTCGAGAAATCCGCCGAAAATGCTGTCGCTGTACAGCGGCAGACGCTTCGGCGGATTCTT
GAACTCAACCATGGTGTTGAATACCTAAAAAAATGGCTTGGAGATATTAGACTTCAAGAT
GAAAATGCTATGGAATCACTTTATGCTACTATGGTTCCTCTTGCTTCTCATGCAGATTTT
GAGCCTTATATACATAGAATTGCTGATGGTGAAAAAGCTCCTTTACTTACTCAAGACCCT
ATGAAAACTTTATCCTTAAGTTCTGGAACCACAGAGGGAAGACAGAAATTTGTACCATTT
ACTCGCCATAGTTCCCAAACAACTCTTCAAATTTTCAAATTGGCAGCAGCTTATAGATCA
AGGATTTATTCAATAAGAGAAGGTGGAAAAGTTCTTGAATTTATATATAGCAGCAAACAA
TACAAAACAAAAGGGGGATTAATAGCAGGAACAGCCACAACACATTATTATGCTAGTGAA
GAATTCAAGATTAAACAACAACACACAAAATCTTTTACTTGTAGCCCTGAGGAAGTTATT
TCAAGTGGAGATTATAAACAATCAACATATTGTCATCTCCTTCTTGGCTTATATTATTGT
GATGAAATTGAATTTGTGACATCAACTTTTGCATATAGTATAGTTCAAGCATTCAGATCA
TTTGAAGAGTTGTGGAAGGAATTGTGCCATGATATAAGAGAAGGTACTCTTAGTTCAAGA
ATCAACATAACCAAAGTACAAAAAGTCGTCTTAGATATCATTGTCCCTAATCCAGAGCTG
GCATCAAGAATTGAATCAATATGTGAAGAAGTAGAAAGGGAAGATTGGTTTAGTATAATC
CCAAAATTATGGCCAAATGTTAAATATGTTTACACAATAATGACAGGCTCAATGCAACCA
TACTTAAACAAATTGAGACATTATGGTGGGAATTTGCCTTTGGTTAGTGCTGATTATGGG
TCCACAGAGAGTTGGATTGGAGTGAATGTGGAACCTTCATCTCCACCAGAGAAAGTAACT
TTTGCAATTATACCCACTTTTTCTTACTTTGAATTCATACCACTACATAGAAGTAAGTCA
CAAAGTTACAATAATAGCCACCAAGATGCTAATCTTCTAGCAAATGATGATTTTATTGAA
GATGAGCCTGTTCCCTTATCTCAAGTCAAGATAGGACAAGAGTATGAAATTGTCCTCACT
ACTTTCACAGGTCTTTATCGATATAGACTAGGGGATGTAGTAGAAGTTGCCGGTTTTCAC
AAGAAGACCCCCAAACTCAACTTTATATGCAGGAGAAAGCTGATATTAACAGTAAATATC
GATAAGAATACTGAACAAGACCTCCAGTTAGTGGTGGGGAGAGGTTCTCGAATACTAATA
AGCAAGTCAAGAGCTGAGCTAGTAGACTTCACAAGCCATGCAAATGTATCAAAAAAACCA
GGCCATTATGTGATCTATTGGGAAATCAAAGGAGATGTTGATGAAAATGTTCTTGGAGAG
TGTTGTACGGAAATGGATGCTTCTTTTGTTGATCATGGATATGTTGTATCAAGAAAAACC
AATTCAATTGGACCATTGGAACTTTGCATTGTGGAAAGAGGTACTTTTAAGAAGATTTTG
GAACATTTTATTGGAAATGGAGCAGCATTGAGCCAATTTAAGACTCCTAGATGCACTAGT
AACCAAAACCTATTAAGAATCCTTAATGTATGTACCATTAAAAGGTTTTATAGCACAGCC
TATATGGGTGATAGAATGTTTGTAACATAA