Plant GARDEN
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TOP > About the Species(Solanum tuberosum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400055801
CDS Infomation

pacid=37477973 polypeptide=PGSC0003DMP400037579 locus=PGSC0003DMG400021672 ID=PGSC0003DMT400055801.v4.03 annot-version=v4.03
Sequence

ATGACTGATTCCGTCTCCACCTACTTTTGTTTTGAACTTTTGAGAGAAATCCTACTGAAA
CTTCCTGTTAAATCCTTAATTCGATTTACAGTTGTCTGCAAATCATGGCATTCACTCATC
ACTAGTTTTCCTTTCATCTCCGCTCATCTCGCCCAAACCCCGCGTTCCAACACCTTTCTT
GTTAGGCATTTCGATAGAACTCGCAAAAGAGAGAACTATTCATTGTTTCAAGACTCTAAG
AATCGACCATTTTCCTTAGATTTTACATCGGAACTACATTTCCCTTTCAAATCGAACCTA
GGATATTTCAAAATTGTTGGTAGCTGCAATGGCATTGTGTGTTTGTATGACGATGTGCTT
GGTCAGTTGCGGAGTCTCGTTCTGTGGAACCCTTCGATTCATAAGTTTATAAGTATTCCT
ATGCCTTTGATTAAGCCGCAGTGGCCTCATATGTGTGTTCTTGGATTTGGTGCTGATTTG
CCTGAGACTGATGACTTTAAGTTGGTTAAACTTGTGTATCATATGAATGATGGGTTCGTA
TATAGTGGTCCTCCTGAGATTGAAATTTATTCGATTAATAGTGGGGTTTGGAGGAGAGTG
GTAGGAGTTGAGATTAAGAATTGTATGGTGAAGTTTTTGTCGCCTCAGGCTTTTGTAAAT
GGAGTTGTACATTGGATTGCGTCTGATGTGGTTGTGAATGGCGGTGACCTTTGGAGTTTA
GTTAAAACTTTTAGTATAGCAGATGAGGTGTTTGGGGAGATTATGTTGCCGGATGCTTTA
GTTGGTGTAACTACAACAAATTTATCAATTATGTTGTTTGAGGAATCACTTGCTGTTGTT
AAGTATGGGAGCGAGATAGGTGGTGATTCATGTGAAGTATGGGTGATGAAGCAGTATGGA
GTTTTGGAATCTTGGAGTAGATTGTATCATATAAATTTGGTTGCAGGTATGGAGAAAGTA
GTTGGATTTAGGAACAATGGTGAAGTTTTGTTTTCAACTAGAAGGAATGATCCTGTTTCT
TATGACCCAAATAGTGGACGAAATACGAGTCTTGGTATTCAAGGGGTCTCTTCGTTGTTT
TATGTTCAGAATTACAGGGAATCACTTATTCTGTTCAATCGGAACAATGCCAGTTCGGGT
GGGTTCTTGGGAGGAATGGAGGTTTATGGACTTAATGAGTAG

Peptide Sequence

PEP ID

PGSC0003DMP400037579
PEP Infomation

pacid=37477973 transcript=PGSC0003DMT400055801 locus=PGSC0003DMG400021672 ID=PGSC0003DMT400055801.v4.03 annot-version=v4.03
Sequence

MTDSVSTYFCFELLREILLKLPVKSLIRFTVVCKSWHSLITSFPFISAHLAQTPRSNTFL
VRHFDRTRKRENYSLFQDSKNRPFSLDFTSELHFPFKSNLGYFKIVGSCNGIVCLYDDVL
GQLRSLVLWNPSIHKFISIPMPLIKPQWPHMCVLGFGADLPETDDFKLVKLVYHMNDGFV
YSGPPEIEIYSINSGVWRRVVGVEIKNCMVKFLSPQAFVNGVVHWIASDVVVNGGDLWSL
VKTFSIADEVFGEIMLPDALVGVTTTNLSIMLFEESLAVVKYGSEIGGDSCEVWVMKQYG
VLESWSRLYHINLVAGMEKVVGFRNNGEVLFSTRRNDPVSYDPNSGRNTSLGIQGVSSLF
YVQNYRESLILFNRNNASSGGFLGGMEVYGLNE*

Transcript Sequence

Transcript ID

PGSC0003DMT400055801
Transcript Infomation

pacid=37477973 locus=PGSC0003DMG400021672 ID=PGSC0003DMT400055801.v4.03 annot-version=v4.03
Sequence

ATGACTGATTCCGTCTCCACCTACTTTTGTTTTGAACTTTTGAGAGAAATCCTACTGAAA
CTTCCTGTTAAATCCTTAATTCGATTTACAGTTGTCTGCAAATCATGGCATTCACTCATC
ACTAGTTTTCCTTTCATCTCCGCTCATCTCGCCCAAACCCCGCGTTCCAACACCTTTCTT
GTTAGGCATTTCGATAGAACTCGCAAAAGAGAGAACTATTCATTGTTTCAAGACTCTAAG
AATCGACCATTTTCCTTAGATTTTACATCGGAACTACATTTCCCTTTCAAATCGAACCTA
GGATATTTCAAAATTGTTGGTAGCTGCAATGGCATTGTGTGTTTGTATGACGATGTGCTT
GGTCAGTTGCGGAGTCTCGTTCTGTGGAACCCTTCGATTCATAAGTTTATAAGTATTCCT
ATGCCTTTGATTAAGCCGCAGTGGCCTCATATGTGTGTTCTTGGATTTGGTGCTGATTTG
CCTGAGACTGATGACTTTAAGTTGGTTAAACTTGTGTATCATATGAATGATGGGTTCGTA
TATAGTGGTCCTCCTGAGATTGAAATTTATTCGATTAATAGTGGGGTTTGGAGGAGAGTG
GTAGGAGTTGAGATTAAGAATTGTATGGTGAAGTTTTTGTCGCCTCAGGCTTTTGTAAAT
GGAGTTGTACATTGGATTGCGTCTGATGTGGTTGTGAATGGCGGTGACCTTTGGAGTTTA
GTTAAAACTTTTAGTATAGCAGATGAGGTGTTTGGGGAGATTATGTTGCCGGATGCTTTA
GTTGGTGTAACTACAACAAATTTATCAATTATGTTGTTTGAGGAATCACTTGCTGTTGTT
AAGTATGGGAGCGAGATAGGTGGTGATTCATGTGAAGTATGGGTGATGAAGCAGTATGGA
GTTTTGGAATCTTGGAGTAGATTGTATCATATAAATTTGGTTGCAGGTATGGAGAAAGTA
GTTGGATTTAGGAACAATGGTGAAGTTTTGTTTTCAACTAGAAGGAATGATCCTGTTTCT
TATGACCCAAATAGTGGACGAAATACGAGTCTTGGTATTCAAGGGGTCTCTTCGTTGTTT
TATGTTCAGAATTACAGGGAATCACTTATTCTGTTCAATCGGAACAATGCCAGTTCGGGT
GGGTTCTTGGGAGGAATGGAGGTTTATGGACTTAATGAGTAG