Plant GARDEN
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TOP > About the Species(Solanum tuberosum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400055796
CDS Infomation

pacid=37478858 polypeptide=PGSC0003DMP400037574 locus=PGSC0003DMG400021670 ID=PGSC0003DMT400055796.v4.03 annot-version=v4.03
Sequence

ATGAGGGGTTTCACATATTTAAGCAAAGTTCTTCATAGCCATTCTTCTTATTCTAAACTT
TTGGTTCTCTGTTCTGTCAGTACTGGAGGTCTATTGGTATATGCGGAATCAAATGTAGAG
AGTGGAAAACAAGTTGTTGAACAGAATCAACCAGAGTCTAAGAAGAAGAGAGTAGTGGTG
CTTGGAACAGGATGGGGTGGTACCAGCTTCCTAAAAGATGTTGATATTTCTTCATATGAT
GTTCAAGTGGTTTCGCCGCGGAACTATTTTGCATTTACACCATTGTTACCTAGTGTCACA
TGTGGGACAGTTGAGGCACGAAGCATAGTAGAGCCGGTTCGGAACATAATAAAAAAGAGA
AGTGGAGAAATTCAATTCTGGGAAGCAGAATGTCTGAAGATCGATCCAGAAAACCGCACA
GTATCTTGCCGTTCTGGTATCAATGATAATTTGGCAGGACAGAATGATTTCTCCCTACAA
TATGACTATTTGGTTGTCGCAGTAGGAGCTCAAGTAAATACTTTTAACACACCAGGTGTT
ATGGAACATTGCCACTTTCTGAAGGAAGTTGAAGATGCTCAAAGGATACGGAGGACAGTA
ATAGATTGTTTTGAAAAATCTGTCATTCCTGGCCTAAGTGAAGAAGAGCGAAGGACCAAC
CTCCATTTTGTTATAGTTGGCGGGGGTCCAACTGGAGTGGAATTTGCTGCTGAGCTACAT
GACTATGTTTATGAGGATTTGGTTAAAATATATCCTTCAGTTAAGGATTTTGTGAAGATA
ACGGTTATCCAGTCCGGAGATCATATCCTGAACACATTTGATGAAAGAATAAGCTCATTT
GCTGAACAGAAATTTCAAAGAGATGGAATTGAGGTTTCGACAGGTTGCCGTGTCACTAGT
GTCTCTGATCATTTCATCAACATGAAAGTAAAATCTACCGGAAAACACGTTGAAGTACCC
TATGGGATGGTTGTATGGTCAACTGGAGTTGGTACCCGCCCATTTGTGAAGGATTTCATG
GAGCAAGTTGGCCAGGAAAAAAGACGTATTCTAGCAACTGATGAATGGTTGCGAGTGAAG
GGCTGTAGTAACGTGTACGCACTAGGTGATTGTGCATCTATAGATCAACGTAAAGTAATG
GAAGATATTTCGGCCATTTTTAAAGCTGCGGATAAGGATGATTCTGGAACGTTAAGCATC
GAGGAATTCCGAGATGTTTTGGAAGACATAATTATCCGTTATCCTCAAGTGGACTTATAT
CTGAAGAACAAACATTTGTTAGAGGCGAAAGACTTATTCAGGGATTCAGAGGGAAATGAA
AGAGAGGAGGTAGATATTGAAGGTTTTAAGTTGGCCCTTTCTCATGTAGATTCACAGATG
AAAAGTTTACCTGCCACTGCTCAGGTTGCTGCTCAACAAGGTACATATCTTTCTAGATGC
TTAAACCGCTGGGATCAATGCAAAAGTAATCCTGAAGGACCTCGCCATTTTAAAAGCTCT
GGACGTCATGAATTTCTTCCCTTCGAGTATCGCCATTTAGGGCAATTCGCTCCTTTAGGT
GGAGATCAAGCAGCAGCAGAACTTCCCGGGGACTGGGTTTCTATGGGCCATAGCACACAG
TGGCTATGGTACTCAGTGTATGCAAGCAAGCAAGTTAGCTGGCGCACGAGGTACTTAGTG
GTTGGTGATTGGGTAAGAAGATACATTTTCGGAAGAGATTCAAGCCGGATTTGA

Peptide Sequence

PEP ID

PGSC0003DMP400037574
PEP Infomation

pacid=37478858 transcript=PGSC0003DMT400055796 locus=PGSC0003DMG400021670 ID=PGSC0003DMT400055796.v4.03 annot-version=v4.03
Sequence

MRGFTYLSKVLHSHSSYSKLLVLCSVSTGGLLVYAESNVESGKQVVEQNQPESKKKRVVV
LGTGWGGTSFLKDVDISSYDVQVVSPRNYFAFTPLLPSVTCGTVEARSIVEPVRNIIKKR
SGEIQFWEAECLKIDPENRTVSCRSGINDNLAGQNDFSLQYDYLVVAVGAQVNTFNTPGV
MEHCHFLKEVEDAQRIRRTVIDCFEKSVIPGLSEEERRTNLHFVIVGGGPTGVEFAAELH
DYVYEDLVKIYPSVKDFVKITVIQSGDHILNTFDERISSFAEQKFQRDGIEVSTGCRVTS
VSDHFINMKVKSTGKHVEVPYGMVVWSTGVGTRPFVKDFMEQVGQEKRRILATDEWLRVK
GCSNVYALGDCASIDQRKVMEDISAIFKAADKDDSGTLSIEEFRDVLEDIIIRYPQVDLY
LKNKHLLEAKDLFRDSEGNEREEVDIEGFKLALSHVDSQMKSLPATAQVAAQQGTYLSRC
LNRWDQCKSNPEGPRHFKSSGRHEFLPFEYRHLGQFAPLGGDQAAAELPGDWVSMGHSTQ
WLWYSVYASKQVSWRTRYLVVGDWVRRYIFGRDSSRI*

Transcript Sequence

Transcript ID

PGSC0003DMT400055796
Transcript Infomation

pacid=37478858 locus=PGSC0003DMG400021670 ID=PGSC0003DMT400055796.v4.03 annot-version=v4.03
Sequence

ATGAGGGGTTTCACATATTTAAGCAAAGTTCTTCATAGCCATTCTTCTTATTCTAAACTT
TTGGTTCTCTGTTCTGTCAGTACTGGAGGTCTATTGGTATATGCGGAATCAAATGTAGAG
AGTGGAAAACAAGTTGTTGAACAGAATCAACCAGAGTCTAAGAAGAAGAGAGTAGTGGTG
CTTGGAACAGGATGGGGTGGTACCAGCTTCCTAAAAGATGTTGATATTTCTTCATATGAT
GTTCAAGTGGTTTCGCCGCGGAACTATTTTGCATTTACACCATTGTTACCTAGTGTCACA
TGTGGGACAGTTGAGGCACGAAGCATAGTAGAGCCGGTTCGGAACATAATAAAAAAGAGA
AGTGGAGAAATTCAATTCTGGGAAGCAGAATGTCTGAAGATCGATCCAGAAAACCGCACA
GTATCTTGCCGTTCTGGTATCAATGATAATTTGGCAGGACAGAATGATTTCTCCCTACAA
TATGACTATTTGGTTGTCGCAGTAGGAGCTCAAGTAAATACTTTTAACACACCAGGTGTT
ATGGAACATTGCCACTTTCTGAAGGAAGTTGAAGATGCTCAAAGGATACGGAGGACAGTA
ATAGATTGTTTTGAAAAATCTGTCATTCCTGGCCTAAGTGAAGAAGAGCGAAGGACCAAC
CTCCATTTTGTTATAGTTGGCGGGGGTCCAACTGGAGTGGAATTTGCTGCTGAGCTACAT
GACTATGTTTATGAGGATTTGGTTAAAATATATCCTTCAGTTAAGGATTTTGTGAAGATA
ACGGTTATCCAGTCCGGAGATCATATCCTGAACACATTTGATGAAAGAATAAGCTCATTT
GCTGAACAGAAATTTCAAAGAGATGGAATTGAGGTTTCGACAGGTTGCCGTGTCACTAGT
GTCTCTGATCATTTCATCAACATGAAAGTAAAATCTACCGGAAAACACGTTGAAGTACCC
TATGGGATGGTTGTATGGTCAACTGGAGTTGGTACCCGCCCATTTGTGAAGGATTTCATG
GAGCAAGTTGGCCAGGAAAAAAGACGTATTCTAGCAACTGATGAATGGTTGCGAGTGAAG
GGCTGTAGTAACGTGTACGCACTAGGTGATTGTGCATCTATAGATCAACGTAAAGTAATG
GAAGATATTTCGGCCATTTTTAAAGCTGCGGATAAGGATGATTCTGGAACGTTAAGCATC
GAGGAATTCCGAGATGTTTTGGAAGACATAATTATCCGTTATCCTCAAGTGGACTTATAT
CTGAAGAACAAACATTTGTTAGAGGCGAAAGACTTATTCAGGGATTCAGAGGGAAATGAA
AGAGAGGAGGTAGATATTGAAGGTTTTAAGTTGGCCCTTTCTCATGTAGATTCACAGATG
AAAAGTTTACCTGCCACTGCTCAGGTTGCTGCTCAACAAGGTACATATCTTTCTAGATGC
TTAAACCGCTGGGATCAATGCAAAAGTAATCCTGAAGGACCTCGCCATTTTAAAAGCTCT
GGACGTCATGAATTTCTTCCCTTCGAGTATCGCCATTTAGGGCAATTCGCTCCTTTAGGT
GGAGATCAAGCAGCAGCAGAACTTCCCGGGGACTGGGTTTCTATGGGCCATAGCACACAG
TGGCTATGGTACTCAGTGTATGCAAGCAAGCAAGTTAGCTGGCGCACGAGGTACTTAGTG
GTTGGTGATTGGGTAAGAAGATACATTTTCGGAAGAGATTCAAGCCGGATTTGA