Plant GARDEN
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TOP > About the Species(Solanum tuberosum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400055784
CDS Infomation

pacid=37476480 polypeptide=PGSC0003DMP400037565 locus=PGSC0003DMG400021666 ID=PGSC0003DMT400055784.v4.03 annot-version=v4.03
Sequence

ATGGAGAAAATTCATCACAATTATGTGAATGTAAGAGGACTCAAGCTTCACTTCGCAGAA
ATTGGAACAGGTCCTGTAGTAGTATTTCTACATGGATTCCCTGAGATATGGTACTCATGG
AGGCATCAAATGATAGCAGTGGCAGATGCAGGATTTCGAGCCATAGCTCCTGATTTTAGA
GGCTATGGTTTGTCAGAGTTGCCTACGTATCCTGAGTTAACGACATTCAAGGACCTTGTT
GATGATTTACTTGATATGATTGATTCATTAGACATCCATAAGGTTTTTCTTGTGGGGAAG
GATTTTGGAGCTAGAGTAGTTTTCCATTTTGCACTCCTACACCCTAATAGAGTTTTAGCA
CTTGCAACACTTGGTGTCCCATTCCTTCTCACTGGTCCAGGAACATTTCCTCAAGATCTC
CTTCCAAAAGGTTTCTATGTGTTGAGATGGCAGGAACCAGGGCGAGCTGAAGCGGACTTT
GGGCGTTTTGATACAAAAACAGTAGTTAAAAACATTTATATATTATTCTCTGGAAGTGAA
TTGCCAGCAGCAAAGGATGATGAAGAAATTATGGACTTGGTTGATCCTTCTACACCATTA
CCTGCCTGGTTTACTGAAGAAGATCTTGCAAACTATGCATCTCTTTATGAAAACTCAGGC
TTCCAGACTGCACTGCAGGTGCCTTACAGGGCTTGGCTAGAAGAATATGGAGTTGAAGAT
ATCAAAATCAAAGTTCCATCTTTGCTTGTGATGGGGGAGAAGGATTATGCCCTTAAGTTT
GGTGGATTAGAGCACTTTATTTCAAGTGGAATGGTGAAAGAGTATGTACCTAATCTTGAA
ATCACATTCTTACCAGAAGGAAGCCATTTTGTCCAAGAGCAGTTTCCTCAACAGGTCAAT
CAGTTGATCATCAACTTCCTCAACAAGCTCGTTTGA

Peptide Sequence

PEP ID

PGSC0003DMP400037565
PEP Infomation

pacid=37476480 transcript=PGSC0003DMT400055784 locus=PGSC0003DMG400021666 ID=PGSC0003DMT400055784.v4.03 annot-version=v4.03
Sequence

MEKIHHNYVNVRGLKLHFAEIGTGPVVVFLHGFPEIWYSWRHQMIAVADAGFRAIAPDFR
GYGLSELPTYPELTTFKDLVDDLLDMIDSLDIHKVFLVGKDFGARVVFHFALLHPNRVLA
LATLGVPFLLTGPGTFPQDLLPKGFYVLRWQEPGRAEADFGRFDTKTVVKNIYILFSGSE
LPAAKDDEEIMDLVDPSTPLPAWFTEEDLANYASLYENSGFQTALQVPYRAWLEEYGVED
IKIKVPSLLVMGEKDYALKFGGLEHFISSGMVKEYVPNLEITFLPEGSHFVQEQFPQQVN
QLIINFLNKLV*

Transcript Sequence

Transcript ID

PGSC0003DMT400055784
Transcript Infomation

pacid=37476480 locus=PGSC0003DMG400021666 ID=PGSC0003DMT400055784.v4.03 annot-version=v4.03
Sequence

ATGGAGAAAATTCATCACAATTATGTGAATGTAAGAGGACTCAAGCTTCACTTCGCAGAA
ATTGGAACAGGTCCTGTAGTAGTATTTCTACATGGATTCCCTGAGATATGGTACTCATGG
AGGCATCAAATGATAGCAGTGGCAGATGCAGGATTTCGAGCCATAGCTCCTGATTTTAGA
GGCTATGGTTTGTCAGAGTTGCCTACGTATCCTGAGTTAACGACATTCAAGGACCTTGTT
GATGATTTACTTGATATGATTGATTCATTAGACATCCATAAGGTTTTTCTTGTGGGGAAG
GATTTTGGAGCTAGAGTAGTTTTCCATTTTGCACTCCTACACCCTAATAGAGTTTTAGCA
CTTGCAACACTTGGTGTCCCATTCCTTCTCACTGGTCCAGGAACATTTCCTCAAGATCTC
CTTCCAAAAGGTTTCTATGTGTTGAGATGGCAGGAACCAGGGCGAGCTGAAGCGGACTTT
GGGCGTTTTGATACAAAAACAGTAGTTAAAAACATTTATATATTATTCTCTGGAAGTGAA
TTGCCAGCAGCAAAGGATGATGAAGAAATTATGGACTTGGTTGATCCTTCTACACCATTA
CCTGCCTGGTTTACTGAAGAAGATCTTGCAAACTATGCATCTCTTTATGAAAACTCAGGC
TTCCAGACTGCACTGCAGGTGCCTTACAGGGCTTGGCTAGAAGAATATGGAGTTGAAGAT
ATCAAAATCAAAGTTCCATCTTTGCTTGTGATGGGGGAGAAGGATTATGCCCTTAAGTTT
GGTGGATTAGAGCACTTTATTTCAAGTGGAATGGTGAAAGAGTATGTACCTAATCTTGAA
ATCACATTCTTACCAGAAGGAAGCCATTTTGTCCAAGAGCAGTTTCCTCAACAGGTCAAT
CAGTTGATCATCAACTTCCTCAACAAGCTCGTTTGA