Plant GARDEN
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TOP > About the Species(Solanum tuberosum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400055780
CDS Infomation

pacid=37478865 polypeptide=PGSC0003DMP400037562 locus=PGSC0003DMG400021664 ID=PGSC0003DMT400055780.v4.03 annot-version=v4.03
Sequence

ATGTCAGCACTCAACAATTTTGCTACTCATATCCTCTCTTCTTCCTCAAAAAGATCCCTT
CAAGAATCCAGAAAGACTCAAACTTTATCCATCAACTTTTCTCCAACTTTCACCATACAA
AATATACCAAAAACCCCATCAAGAATAAGTTTTGTTTGTCCAATAAATGCTGTGACAGAA
GATAAAGAAGCAGAGGCCAACCAAGAAAATGAAAAGAAAGAATCAAATGGAACTGAAATT
GAAGAAAAAATCAAGAATAGCTTCTTGTCCATTTTGTTGGATAAAGATAGGTTTTTTAAT
GCTTCAATTGTACTTGGTGCTGGTACACTTGCCATCACAAGGTTACTCACTATAGATCAT
GAGTATTGGCATGGATGGACCCTTTACGAGATACTGAGGTATGCCCCGGAGCACAACTGG
ATTGCATATGAAGAAGCACTGAAAGCAAATCCTGTGTTAGCTAAAATGGCGATTAGTGGT
ATTGTCTACTCTGTAGGAGACTGGATCGCTCAATGCTATGAAGGAAAGCCTCTTCTTGAA
TTTGACCGTACTCGCATGTTTAGATCTGGTCTTGTTGGATTTTCACTTCATGGTTCCCTT
TCCCACTACTATTACCAATTTTGTGAGGCTCTTTTCCCGTCCAACGATTGGTGGGTGGTT
CCAGCTAAAGTTGCTTTTGACCAAACCATTTGGTCAGCAATTTGGAATAGCATCTATTTT
GTGGTCCTTGGTTTCTTGCGTCTCGAATCTGCATCCAATATTTTTGGCGAACTGAGAGCC
ACGTTTTGGCCCATGTTAACAGCAGGGTGGAAACTTTGGCCATTTGCTCACCTAATAACT
TATGGCGTTATTCCTCTTGAGCAAAGACTTCTTTGGGTGGACTGTGTCGAACTGGTTTGG
GTTACTATTCTCTCAACCTACTCTAATGAGAAATCAGAGGCGCGGATATCTGAAGAATTA
TCGGAAGCTAAATCTGATTCATCATCGAGTAAATTGCCCGAGGATTGA

Peptide Sequence

PEP ID

PGSC0003DMP400037562
PEP Infomation

pacid=37478865 transcript=PGSC0003DMT400055780 locus=PGSC0003DMG400021664 ID=PGSC0003DMT400055780.v4.03 annot-version=v4.03
Sequence

MSALNNFATHILSSSSKRSLQESRKTQTLSINFSPTFTIQNIPKTPSRISFVCPINAVTE
DKEAEANQENEKKESNGTEIEEKIKNSFLSILLDKDRFFNASIVLGAGTLAITRLLTIDH
EYWHGWTLYEILRYAPEHNWIAYEEALKANPVLAKMAISGIVYSVGDWIAQCYEGKPLLE
FDRTRMFRSGLVGFSLHGSLSHYYYQFCEALFPSNDWWVVPAKVAFDQTIWSAIWNSIYF
VVLGFLRLESASNIFGELRATFWPMLTAGWKLWPFAHLITYGVIPLEQRLLWVDCVELVW
VTILSTYSNEKSEARISEELSEAKSDSSSSKLPED*

Transcript Sequence

Transcript ID

PGSC0003DMT400055780
Transcript Infomation

pacid=37478865 locus=PGSC0003DMG400021664 ID=PGSC0003DMT400055780.v4.03 annot-version=v4.03
Sequence

ATGTCAGCACTCAACAATTTTGCTACTCATATCCTCTCTTCTTCCTCAAAAAGATCCCTT
CAAGAATCCAGAAAGACTCAAACTTTATCCATCAACTTTTCTCCAACTTTCACCATACAA
AATATACCAAAAACCCCATCAAGAATAAGTTTTGTTTGTCCAATAAATGCTGTGACAGAA
GATAAAGAAGCAGAGGCCAACCAAGAAAATGAAAAGAAAGAATCAAATGGAACTGAAATT
GAAGAAAAAATCAAGAATAGCTTCTTGTCCATTTTGTTGGATAAAGATAGGTTTTTTAAT
GCTTCAATTGTACTTGGTGCTGGTACACTTGCCATCACAAGGTTACTCACTATAGATCAT
GAGTATTGGCATGGATGGACCCTTTACGAGATACTGAGGTATGCCCCGGAGCACAACTGG
ATTGCATATGAAGAAGCACTGAAAGCAAATCCTGTGTTAGCTAAAATGGCGATTAGTGGT
ATTGTCTACTCTGTAGGAGACTGGATCGCTCAATGCTATGAAGGAAAGCCTCTTCTTGAA
TTTGACCGTACTCGCATGTTTAGATCTGGTCTTGTTGGATTTTCACTTCATGGTTCCCTT
TCCCACTACTATTACCAATTTTGTGAGGCTCTTTTCCCGTCCAACGATTGGTGGGTGGTT
CCAGCTAAAGTTGCTTTTGACCAAACCATTTGGTCAGCAATTTGGAATAGCATCTATTTT
GTGGTCCTTGGTTTCTTGCGTCTCGAATCTGCATCCAATATTTTTGGCGAACTGAGAGCC
ACGTTTTGGCCCATGTTAACAGCAGGGTGGAAACTTTGGCCATTTGCTCACCTAATAACT
TATGGCGTTATTCCTCTTGAGCAAAGACTTCTTTGGGTGGACTGTGTCGAACTGGTTTGG
GTTACTATTCTCTCAACCTACTCTAATGAGAAATCAGAGGCGCGGATATCTGAAGAATTA
TCGGAAGCTAAATCTGATTCATCATCGAGTAAATTGCCCGAGGATTGA