Plant GARDEN
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TOP > About the Species(Solanum tuberosum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400055779
CDS Infomation

pacid=37479880 polypeptide=PGSC0003DMP400037561 locus=PGSC0003DMG400021663 ID=PGSC0003DMT400055779.v4.03 annot-version=v4.03
Sequence

ATGAAGATTAAACCTCCTCCAACTTCTTCTTCTTCTTCTCAGACGCTAACAGCAACGGCG
GCATCATCTCATGATGCTAAATTACTTGTTCGTGAAACCCTCCGTATTAGTGCTGATCTT
GCTTCTGCTTCTTATGTGCCGTCGGTTGGTTCAGCACCGGAAAATGCTAGTTTTGGAGTT
GTAGATCGGGAATTTGTTGATTCAAGCTTGAGATTGCTTTGTTGTGAAGAGATCGATGGT
CGTAGATGGAAGTATTTTGCTGATGAGAGTGTCGGTTCTGAACAATTGAAGTTGAAGAAG
AAGAAGAATGCGATTCGTGCTGTTAGTTTGCACTCTCCACAAGCTCCTGCTGAGGAGTTC
ATGGCATTCATAAGATCCTATGTGGTTCCAGAAGGTTTTCCTGACAGCGTTACACCTTCT
TATGTACCATATATGACATGGAGGGCACTAAAGCACTTCTTTGGTGGTGCAATGGGAGTT
TTCACGACGCAAACACTCTTAAATTCAGTAGGAGTCTCCAAACATAGAACTACCCCTGGT
GCTGTAGCCATTAACTGGATTCTCAAGGATGGTGCTGGTCGGGTGGGGAAGATGCTTTAT
GCACGGCAGGGAAAGAAATTTGATTATGATCTAAAACAGCTAAGGTTTGCGGGTGATCTT
CTGATGGAGTTGGGAGCTGGTGTTGAACTGGTAACTGCTGTCGTGCCGCAGTTTTTTCTT
CCCTTAGCCTGTGCTGCGAATGTCGCAAAGAATGTAGGGGCTGTCACTTCTACTTCAACT
CGTACTCCTATATATAAGGCCTTTGCTAAAGGGGAAAATATTGGGGATGTAACAGCTAAA
GGGGAATGCGTTGGAAATCTAGCTGATTTACTCGGGACAGGATTAAGTATCTTGATTTCC
AAAAGGAATCCATCCTTGGTCAAGACATTTGCCTTCCTCTCATTTGGATATGTCTTCAGC
TCTTACCGAGAGGTGAAATCTGTTGTGCTGCATACCCTGAACCGTGCAAGATTCACAGTA
GCAGTAGAATCTTTCCTAAGGACAGGGAGAGTTCCAACACTGCAGGACGGAAATTCAAGG
GAAGACATATTTAATTTTCCATGGAGACAGCACAGGCCTATTGTTCTTGGACCTAGATTT
AAAGAAGCTTTCCAAGATCCAAACTCATATCTTGCTGTCAAGCCCATCTTTGAGAAGGAG
CATTATATAGTGACATACAATCCTTCCAAAGAAAACATATATGTGCTGCTCAAAGATCAA
GCCAAGTCTGATGATGTACTGAAAGCAGCATTTCATGGTCATGTGCTTCTGCACATCATT
CGTTCATCCACCAACAAACAGTCTTCCTCCAGGAAACAACATGAAGATGAACTTTCAGCA
TCCTTGCTATCAACTGCTGATCTTCAAGCTCATGTTGCAGAATCTTATAAAATGGTCTCT
GCTTTATATATGCCTTTCAAGAGCAAAGCTAAAGAACAGGGTTGGGTGATGTCGGAATCA
CTACTTAATCCTGGCCGAGCTCGGCTTTGTGAAATGGCCACATAA

Peptide Sequence

PEP ID

PGSC0003DMP400037561
PEP Infomation

pacid=37479880 transcript=PGSC0003DMT400055779 locus=PGSC0003DMG400021663 ID=PGSC0003DMT400055779.v4.03 annot-version=v4.03
Sequence

MKIKPPPTSSSSSQTLTATAASSHDAKLLVRETLRISADLASASYVPSVGSAPENASFGV
VDREFVDSSLRLLCCEEIDGRRWKYFADESVGSEQLKLKKKKNAIRAVSLHSPQAPAEEF
MAFIRSYVVPEGFPDSVTPSYVPYMTWRALKHFFGGAMGVFTTQTLLNSVGVSKHRTTPG
AVAINWILKDGAGRVGKMLYARQGKKFDYDLKQLRFAGDLLMELGAGVELVTAVVPQFFL
PLACAANVAKNVGAVTSTSTRTPIYKAFAKGENIGDVTAKGECVGNLADLLGTGLSILIS
KRNPSLVKTFAFLSFGYVFSSYREVKSVVLHTLNRARFTVAVESFLRTGRVPTLQDGNSR
EDIFNFPWRQHRPIVLGPRFKEAFQDPNSYLAVKPIFEKEHYIVTYNPSKENIYVLLKDQ
AKSDDVLKAAFHGHVLLHIIRSSTNKQSSSRKQHEDELSASLLSTADLQAHVAESYKMVS
ALYMPFKSKAKEQGWVMSESLLNPGRARLCEMAT*

Transcript Sequence

Transcript ID

PGSC0003DMT400055779
Transcript Infomation

pacid=37479880 locus=PGSC0003DMG400021663 ID=PGSC0003DMT400055779.v4.03 annot-version=v4.03
Sequence

ATGAAGATTAAACCTCCTCCAACTTCTTCTTCTTCTTCTCAGACGCTAACAGCAACGGCG
GCATCATCTCATGATGCTAAATTACTTGTTCGTGAAACCCTCCGTATTAGTGCTGATCTT
GCTTCTGCTTCTTATGTGCCGTCGGTTGGTTCAGCACCGGAAAATGCTAGTTTTGGAGTT
GTAGATCGGGAATTTGTTGATTCAAGCTTGAGATTGCTTTGTTGTGAAGAGATCGATGGT
CGTAGATGGAAGTATTTTGCTGATGAGAGTGTCGGTTCTGAACAATTGAAGTTGAAGAAG
AAGAAGAATGCGATTCGTGCTGTTAGTTTGCACTCTCCACAAGCTCCTGCTGAGGAGTTC
ATGGCATTCATAAGATCCTATGTGGTTCCAGAAGGTTTTCCTGACAGCGTTACACCTTCT
TATGTACCATATATGACATGGAGGGCACTAAAGCACTTCTTTGGTGGTGCAATGGGAGTT
TTCACGACGCAAACACTCTTAAATTCAGTAGGAGTCTCCAAACATAGAACTACCCCTGGT
GCTGTAGCCATTAACTGGATTCTCAAGGATGGTGCTGGTCGGGTGGGGAAGATGCTTTAT
GCACGGCAGGGAAAGAAATTTGATTATGATCTAAAACAGCTAAGGTTTGCGGGTGATCTT
CTGATGGAGTTGGGAGCTGGTGTTGAACTGGTAACTGCTGTCGTGCCGCAGTTTTTTCTT
CCCTTAGCCTGTGCTGCGAATGTCGCAAAGAATGTAGGGGCTGTCACTTCTACTTCAACT
CGTACTCCTATATATAAGGCCTTTGCTAAAGGGGAAAATATTGGGGATGTAACAGCTAAA
GGGGAATGCGTTGGAAATCTAGCTGATTTACTCGGGACAGGATTAAGTATCTTGATTTCC
AAAAGGAATCCATCCTTGGTCAAGACATTTGCCTTCCTCTCATTTGGATATGTCTTCAGC
TCTTACCGAGAGGTGAAATCTGTTGTGCTGCATACCCTGAACCGTGCAAGATTCACAGTA
GCAGTAGAATCTTTCCTAAGGACAGGGAGAGTTCCAACACTGCAGGACGGAAATTCAAGG
GAAGACATATTTAATTTTCCATGGAGACAGCACAGGCCTATTGTTCTTGGACCTAGATTT
AAAGAAGCTTTCCAAGATCCAAACTCATATCTTGCTGTCAAGCCCATCTTTGAGAAGGAG
CATTATATAGTGACATACAATCCTTCCAAAGAAAACATATATGTGCTGCTCAAAGATCAA
GCCAAGTCTGATGATGTACTGAAAGCAGCATTTCATGGTCATGTGCTTCTGCACATCATT
CGTTCATCCACCAACAAACAGTCTTCCTCCAGGAAACAACATGAAGATGAACTTTCAGCA
TCCTTGCTATCAACTGCTGATCTTCAAGCTCATGTTGCAGAATCTTATAAAATGGTCTCT
GCTTTATATATGCCTTTCAAGAGCAAAGCTAAAGAACAGGGTTGGGTGATGTCGGAATCA
CTACTTAATCCTGGCCGAGCTCGGCTTTGTGAAATGGCCACATAA