Plant GARDEN
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TOP > About the Species(Solanum tuberosum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400055776
CDS Infomation

pacid=37479110 polypeptide=PGSC0003DMP400037558 locus=PGSC0003DMG400021661 ID=PGSC0003DMT400055776.v4.03 annot-version=v4.03
Sequence

ATGAGTTATTTTTCTTCAAACTTCCAACGTTTGCTTTCTTACACAAAACTCTTAACATCT
CATGTCAATCAAGGCAAACATGAACAAGCCCTTTCTCTTTTCCACCAAATCCATTCAACT
CTCTCCCATTCACTCGACCCCTTCGTGTTCCCTCTCGCCCTTAAATCTTGCGCCGCGCTG
AGTTTCTCTCAGCTCGGCGCAACCATTCACGCACACACAACCAAAGCCTCTTTCATTTCC
AACCCCTTTGTCGCTTGTGCATTAGTTGACATGTATGGGAAATGTGTCTCCGTAGAGTAC
GCACGCCAACTGTTTGATGAATCTCCGGAGAGAAATGTAGTCGTTTGGAACTCGATGATC
TCTGTTTACGCACATTGTAATGATGTTGGGAGGGCGTTGGAGTTGTTTCGAGTGATGGAT
GTGGAGCCTAATTCTTCTACTTTTAACGCGATTATCACGGGGTTGGCGGACACGGAGGAT
GGGTTTAGTAGGGCTGTTTTGTGTTACAGAGAGATGGGGAGGATGGGGTTGAAGCCGAAT
TTGATTACGGTTCTTGCATTGTTACGTGCTTGTCTTGGTACGGCGGATGTGAATTTGATC
GAACAGATTCATGGGTATTCGATAAGGAATGATATTGATCCAGATCCTCAATTGAGGAGT
GGATTAATTGAGGCTTATGGGCGTTGCGGGTGTCTTGAGAAAGCTCATCTTGTGTTTCTT
AGTATGAGAAACAGGGATGTGGTTGCTTGGAGTAGTTTGATATCAGCTTACGCGTTTCAC
GGGGAGGCAAGAACTGCACTTGAAGTTTTTGAGCAAATGCAGAAGGCTAATGTCAGGCCT
GATGGAATTACTTTTCTTGGGGTTTTGAAAGCTTGTAGTCATGCTGGACTACCTGATGAA
GCACATATGTACTTTTCTCGTATGAGAGTTCGTTATGGTGTTGAAGCAAGCAGTGATCAT
TACGCTTGTTTGATAGATGTATTGAGTAGGTCAGGAAGATTGCATCAGGCGTATGACGTT
ATTAGGAAAATGCCAGTGAAAGTGACTGCGAAAGCTTGGGGAGCACTACTTGCTTCTTGT
CGAACTTATGGAGAAGTCGAGCTGGCAGAAATAGCTGGAAGAGCTTTATTTGAAATAGAG
CCTGAGAATCCTGCTAATTTTGTGATTTTGGCAAGAATTTATTCTAGTAATGGGCGATTT
GAGGAAGCGGAAAGACTCAGAAGAGAGATGATCAAGAGGGGCATGAAAACATCCCCGGGT
AGCAGCTGGGTAGTACATCAATATTGA

Peptide Sequence

PEP ID

PGSC0003DMP400037558
PEP Infomation

pacid=37479110 transcript=PGSC0003DMT400055776 locus=PGSC0003DMG400021661 ID=PGSC0003DMT400055776.v4.03 annot-version=v4.03
Sequence

MSYFSSNFQRLLSYTKLLTSHVNQGKHEQALSLFHQIHSTLSHSLDPFVFPLALKSCAAL
SFSQLGATIHAHTTKASFISNPFVACALVDMYGKCVSVEYARQLFDESPERNVVVWNSMI
SVYAHCNDVGRALELFRVMDVEPNSSTFNAIITGLADTEDGFSRAVLCYREMGRMGLKPN
LITVLALLRACLGTADVNLIEQIHGYSIRNDIDPDPQLRSGLIEAYGRCGCLEKAHLVFL
SMRNRDVVAWSSLISAYAFHGEARTALEVFEQMQKANVRPDGITFLGVLKACSHAGLPDE
AHMYFSRMRVRYGVEASSDHYACLIDVLSRSGRLHQAYDVIRKMPVKVTAKAWGALLASC
RTYGEVELAEIAGRALFEIEPENPANFVILARIYSSNGRFEEAERLRREMIKRGMKTSPG
SSWVVHQY*

Transcript Sequence

Transcript ID

PGSC0003DMT400055776
Transcript Infomation

pacid=37479110 locus=PGSC0003DMG400021661 ID=PGSC0003DMT400055776.v4.03 annot-version=v4.03
Sequence

ATGAGTTATTTTTCTTCAAACTTCCAACGTTTGCTTTCTTACACAAAACTCTTAACATCT
CATGTCAATCAAGGCAAACATGAACAAGCCCTTTCTCTTTTCCACCAAATCCATTCAACT
CTCTCCCATTCACTCGACCCCTTCGTGTTCCCTCTCGCCCTTAAATCTTGCGCCGCGCTG
AGTTTCTCTCAGCTCGGCGCAACCATTCACGCACACACAACCAAAGCCTCTTTCATTTCC
AACCCCTTTGTCGCTTGTGCATTAGTTGACATGTATGGGAAATGTGTCTCCGTAGAGTAC
GCACGCCAACTGTTTGATGAATCTCCGGAGAGAAATGTAGTCGTTTGGAACTCGATGATC
TCTGTTTACGCACATTGTAATGATGTTGGGAGGGCGTTGGAGTTGTTTCGAGTGATGGAT
GTGGAGCCTAATTCTTCTACTTTTAACGCGATTATCACGGGGTTGGCGGACACGGAGGAT
GGGTTTAGTAGGGCTGTTTTGTGTTACAGAGAGATGGGGAGGATGGGGTTGAAGCCGAAT
TTGATTACGGTTCTTGCATTGTTACGTGCTTGTCTTGGTACGGCGGATGTGAATTTGATC
GAACAGATTCATGGGTATTCGATAAGGAATGATATTGATCCAGATCCTCAATTGAGGAGT
GGATTAATTGAGGCTTATGGGCGTTGCGGGTGTCTTGAGAAAGCTCATCTTGTGTTTCTT
AGTATGAGAAACAGGGATGTGGTTGCTTGGAGTAGTTTGATATCAGCTTACGCGTTTCAC
GGGGAGGCAAGAACTGCACTTGAAGTTTTTGAGCAAATGCAGAAGGCTAATGTCAGGCCT
GATGGAATTACTTTTCTTGGGGTTTTGAAAGCTTGTAGTCATGCTGGACTACCTGATGAA
GCACATATGTACTTTTCTCGTATGAGAGTTCGTTATGGTGTTGAAGCAAGCAGTGATCAT
TACGCTTGTTTGATAGATGTATTGAGTAGGTCAGGAAGATTGCATCAGGCGTATGACGTT
ATTAGGAAAATGCCAGTGAAAGTGACTGCGAAAGCTTGGGGAGCACTACTTGCTTCTTGT
CGAACTTATGGAGAAGTCGAGCTGGCAGAAATAGCTGGAAGAGCTTTATTTGAAATAGAG
CCTGAGAATCCTGCTAATTTTGTGATTTTGGCAAGAATTTATTCTAGTAATGGGCGATTT
GAGGAAGCGGAAAGACTCAGAAGAGAGATGATCAAGAGGGGCATGAAAACATCCCCGGGT
AGCAGCTGGGTAGTACATCAATATTGA