Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400055767
CDS Infomation

pacid=37442138 polypeptide=PGSC0003DMP400037550 locus=PGSC0003DMG400021657 ID=PGSC0003DMT400055767.v4.03 annot-version=v4.03
Sequence

ATGGCAGGATGGTCGAAAAGAGTTGATGGGTCAAATCTAACGAGCTTCAGAAAACCCGAA
AACCCAAAAACTCTTGTGAAAAATGAAGTAGATTACGATAGTGCGAAACTGTTGTTCATA
GAAGTTTTTACTATATGCTTGAAAGAAGTTGCTGGGAGTTTGTGTTATAGGCCATTACCT
CCGATGTTGGGTGATGGGAAAGCAGTGGATTTGTTCAAGCTTTACTTGGTTGTGAGGAAA
AATGGTGGGTATCAAAGAGTTTCTGAAAATGGGTTGTGGGGTTTAGTGGGTATGGATTGT
GGGTTCGATTCGAGTTATGGGATGGCTTTGAAATTGGTTTATGTTAAGTATTTGGGTGTA
TTAGAGAAATGGATGTTGAGAGTTAGGGAAATTGATGGTAGTAGTGTTAAGAGTAAGGTG
AGTAAATGTGATTTGGGTTCAGGTGGGGATGGAGTTCCTATGGATGTTGAGTTGGATCTG
AAGAAGGTTCTAATGAAGATTTCAGATGAAAAAGCTAAAGATGGTGAAAATGGGAAATGT
AAATTGAGGAAGAAAGGTGTTGATACTACAGATGGTGATGAGGCTCGAGATTTTGATGGG
TTGAATGAAAGTAATGAGAAATTTGATGATCAAAGTAATTTGGACAGCAATGTGATTACT
GTAAAGGATATTGATGAAACTAGGAGTGTTGTCTATGACAAAGAACATTTGAAGTCTGTC
AAGGGATGGGAAAGTGTTAGTGTTCTGCATGGAAATGGAACAGATGAGTCGTTAACGAAG
TCCACTATGGTTGAGGAAGATTGCATTAGTAGGAAGAGGAAGCGAGAATCTTACTTGGAT
ATGGTGAAGTGGGTAAGTGAAGTTGCAAAAAATCCTTGTGATCTTGCCATTGGTACTTTG
CCAGAAAGGTCTAAGTGGAAGGATTATGGGACTGAAGTGGTTTGGAAGAAGGTTCTGCTG
CTGCGAGATGAAATGCTTTTGAAAAAGGATGTGGATCCATGTGCTCAGCAATCAGTATGG
CAGATAAAACAGAAGATGCATCCATCTATGTATGATGAGAATTCTGGTTCCGGAAGATTA
AGATGCAGCCAGCGAGTGCTATCTGCAAAAGATCATCTGAAAAAGAGGCGTGCACTGCAG
ATTTCTGCGTCACCTTCAAGTTCTCATAATGACGAGGATCAGGCCGATGTACCAACCGGT
TCTTCTGCAGAGTCGGCAATTGGTTTTTGGTGGAAGCAGCGCAGAAAGAGAATACCAGTT
GGGCCACAGTTTCAAGCAGATATTCCCGAATCGATTGAGGAGATCTATGAAAGTGACTCT
AAATGGCTGGGCACTGGAATCTGGCCACTAGGCAAACGAGGGAAAAAAAGAACCTTAGTT
GACAGAGGTCCTATAGGTAAAGGAAGACAAGATATCTGTAGCTGCAACACTCGAGGTTCT
TATGACTGTGTCAAGTTTCATATATCCGAGAAAAGGAGGAAGCTTAAGATTGATTTGGGA
TCAGCCTATTCTGAGTGGAAATTTGACTGTATTGGTGAAGAAGTTGCACTTTCTTGGTCA
AGAGAAGAAGAACACAAATTTCAGGATATAGTGAAGTCGAACCCTTTGTCTGAGGAGAAA
AGTTTCTGGGATGAGGTTTTTAAGTTCTTTCCAAATAAAAGCAGGGAGTCTTTAGTAAGC
TACTACTTTAACGTCTTCCTTCTACGCCGCAGAGCCAACCAGAATAGGACTAATGCTGGT
AATATCGACAGTGATGATGATGAATCAGAATATGGACCTAGATTTGATTGTTTTGGGCGT
GATGCTAAGTTCTCCATCTTTCGTTCCCCAAGTAAAAACACATCTGGATCGGAGGTAGTA
CCATGA

Peptide Sequence

PEP ID

PGSC0003DMP400037550
PEP Infomation

pacid=37442138 transcript=PGSC0003DMT400055767 locus=PGSC0003DMG400021657 ID=PGSC0003DMT400055767.v4.03 annot-version=v4.03
Sequence

MAGWSKRVDGSNLTSFRKPENPKTLVKNEVDYDSAKLLFIEVFTICLKEVAGSLCYRPLP
PMLGDGKAVDLFKLYLVVRKNGGYQRVSENGLWGLVGMDCGFDSSYGMALKLVYVKYLGV
LEKWMLRVREIDGSSVKSKVSKCDLGSGGDGVPMDVELDLKKVLMKISDEKAKDGENGKC
KLRKKGVDTTDGDEARDFDGLNESNEKFDDQSNLDSNVITVKDIDETRSVVYDKEHLKSV
KGWESVSVLHGNGTDESLTKSTMVEEDCISRKRKRESYLDMVKWVSEVAKNPCDLAIGTL
PERSKWKDYGTEVVWKKVLLLRDEMLLKKDVDPCAQQSVWQIKQKMHPSMYDENSGSGRL
RCSQRVLSAKDHLKKRRALQISASPSSSHNDEDQADVPTGSSAESAIGFWWKQRRKRIPV
GPQFQADIPESIEEIYESDSKWLGTGIWPLGKRGKKRTLVDRGPIGKGRQDICSCNTRGS
YDCVKFHISEKRRKLKIDLGSAYSEWKFDCIGEEVALSWSREEEHKFQDIVKSNPLSEEK
SFWDEVFKFFPNKSRESLVSYYFNVFLLRRRANQNRTNAGNIDSDDDESEYGPRFDCFGR
DAKFSIFRSPSKNTSGSEVVP*

Transcript Sequence

Transcript ID

PGSC0003DMT400055767
Transcript Infomation

pacid=37442138 locus=PGSC0003DMG400021657 ID=PGSC0003DMT400055767.v4.03 annot-version=v4.03
Sequence

ATGGCAGGATGGTCGAAAAGAGTTGATGGGTCAAATCTAACGAGCTTCAGAAAACCCGAA
AACCCAAAAACTCTTGTGAAAAATGAAGTAGATTACGATAGTGCGAAACTGTTGTTCATA
GAAGTTTTTACTATATGCTTGAAAGAAGTTGCTGGGAGTTTGTGTTATAGGCCATTACCT
CCGATGTTGGGTGATGGGAAAGCAGTGGATTTGTTCAAGCTTTACTTGGTTGTGAGGAAA
AATGGTGGGTATCAAAGAGTTTCTGAAAATGGGTTGTGGGGTTTAGTGGGTATGGATTGT
GGGTTCGATTCGAGTTATGGGATGGCTTTGAAATTGGTTTATGTTAAGTATTTGGGTGTA
TTAGAGAAATGGATGTTGAGAGTTAGGGAAATTGATGGTAGTAGTGTTAAGAGTAAGGTG
AGTAAATGTGATTTGGGTTCAGGTGGGGATGGAGTTCCTATGGATGTTGAGTTGGATCTG
AAGAAGGTTCTAATGAAGATTTCAGATGAAAAAGCTAAAGATGGTGAAAATGGGAAATGT
AAATTGAGGAAGAAAGGTGTTGATACTACAGATGGTGATGAGGCTCGAGATTTTGATGGG
TTGAATGAAAGTAATGAGAAATTTGATGATCAAAGTAATTTGGACAGCAATGTGATTACT
GTAAAGGATATTGATGAAACTAGGAGTGTTGTCTATGACAAAGAACATTTGAAGTCTGTC
AAGGGATGGGAAAGTGTTAGTGTTCTGCATGGAAATGGAACAGATGAGTCGTTAACGAAG
TCCACTATGGTTGAGGAAGATTGCATTAGTAGGAAGAGGAAGCGAGAATCTTACTTGGAT
ATGGTGAAGTGGGTAAGTGAAGTTGCAAAAAATCCTTGTGATCTTGCCATTGGTACTTTG
CCAGAAAGGTCTAAGTGGAAGGATTATGGGACTGAAGTGGTTTGGAAGAAGGTTCTGCTG
CTGCGAGATGAAATGCTTTTGAAAAAGGATGTGGATCCATGTGCTCAGCAATCAGTATGG
CAGATAAAACAGAAGATGCATCCATCTATGTATGATGAGAATTCTGGTTCCGGAAGATTA
AGATGCAGCCAGCGAGTGCTATCTGCAAAAGATCATCTGAAAAAGAGGCGTGCACTGCAG
ATTTCTGCGTCACCTTCAAGTTCTCATAATGACGAGGATCAGGCCGATGTACCAACCGGT
TCTTCTGCAGAGTCGGCAATTGGTTTTTGGTGGAAGCAGCGCAGAAAGAGAATACCAGTT
GGGCCACAGTTTCAAGCAGATATTCCCGAATCGATTGAGGAGATCTATGAAAGTGACTCT
AAATGGCTGGGCACTGGAATCTGGCCACTAGGCAAACGAGGGAAAAAAAGAACCTTAGTT
GACAGAGGTCCTATAGGTAAAGGAAGACAAGATATCTGTAGCTGCAACACTCGAGGTTCT
TATGACTGTGTCAAGTTTCATATATCCGAGAAAAGGAGGAAGCTTAAGATTGATTTGGGA
TCAGCCTATTCTGAGTGGAAATTTGACTGTATTGGTGAAGAAGTTGCACTTTCTTGGTCA
AGAGAAGAAGAACACAAATTTCAGGATATAGTGAAGTCGAACCCTTTGTCTGAGGAGAAA
AGTTTCTGGGATGAGGTTTTTAAGTTCTTTCCAAATAAAAGCAGGGAGTCTTTAGTAAGC
TACTACTTTAACGTCTTCCTTCTACGCCGCAGAGCCAACCAGAATAGGACTAATGCTGGT
AATATCGACAGTGATGATGATGAATCAGAATATGGACCTAGATTTGATTGTTTTGGGCGT
GATGCTAAGTTCTCCATCTTTCGTTCCCCAAGTAAAAACACATCTGGATCGGAGGTAGTA
CCATGA