Plant GARDEN
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TOP > About the Species(Solanum tuberosum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400055739
CDS Infomation

pacid=37443318 polypeptide=PGSC0003DMP400037528 locus=PGSC0003DMG400021644 ID=PGSC0003DMT400055739.v4.03 annot-version=v4.03
Sequence

ATGACAAATCCAAGAACCTTCTTCACCATTCAATCTCCAACAAATGCATCTTTTTCTTCC
CATTTTACCCTCAAGAAACCTTCAAATTCACAACAACAACCACCAGTCTATAAGAAGTTC
ACTTTTAGAGTTCTTTGTTCCTCTCAACCTTCAAGAACCCCACAGAATTCAAATCTAATT
TCTACCCTTGTCAAGATTCTACGCGTAGTACCGGATTGGGCTGACAAAATTCAAGAAGGG
GGTATGAGAAAAAAGAGATCTTTATACAAGCATGAGACTTGGGTGCAACATAGAAGTTCT
TTAAGGCATCTTAGGCATTTGTTTTCGAGCTTCAATTCGCGGGTTGTTTTGTCGTTGATA
CCTCCTGTTATAGCTTTTACTTCATTTGCATTTGTGATTGCTTGTTATAATTCAGCTGTT
TCATTGCATTGGTTGCCTGAGTTTTTCCCTATCTTGAGAGCTAGTCCACAGCCTTATCAG
TTGACAGCTCCAGCTCTGGCGCTTTTATTGGTGTTTAGGACGGAGGCGTCTTACTCGAGG
TTCGAAGCAGGGAAGAAGGCTTGGACTAAAGTCATTGCTGGAACTAATGATTTTGCTAGG
CAGGTCATTGCTTGTGTTGATAAGAGGGATGATGTGCTCAAAGAGGCACTTTTGCAGTAT
ATCATGGCATTTCCAGTTGCCTTAAAGTGCCACATAGTATATGACTCGGATATAGCAAGT
GATCTCAAAAACTTACTCGAGGCTGATGATCTAGCATTAGTTGTCAGTTCTAAGCATCGC
CCTCGTTGCATCATTGGATTCATCTCTCAGAGCCTTCAGTCATTAAACTTGGACGGGACA
ATACTGAGTCAGCTGGAGTCAAAGATTACTTGTTTCCATGAAGGTATTGGTGTATGTGAA
CAACTCTTGGGCATACCTATTCCCCTTTCATACACTCGATTGACGTCAAGGTTCTTAGTC
CTTTGGCATCTAACTCTTCCTATTATACTTTGGGATGATTGCCACTGGATTGTGGTTCCA
GCAACTTTCATAAGTGCGGCTTCCTTATTCTGCATCGAAGAGGTTGGTGTCCTTATCGAG
GAGCCATTTCCAATGCTTGCACTCGATGAGCTCTGTCAGCGTGTTCACGACAACATCCAC
GAAGCAATGGCAAACGAAAAGCAGATTCAAGAAATAGTAAACAGCAAAAGAAAGAGAAGT
TTTAGTGAACACTCTCCAAATGGTTGGCCAACCTCATAG

Peptide Sequence

PEP ID

PGSC0003DMP400037528
PEP Infomation

pacid=37443318 transcript=PGSC0003DMT400055739 locus=PGSC0003DMG400021644 ID=PGSC0003DMT400055739.v4.03 annot-version=v4.03
Sequence

MTNPRTFFTIQSPTNASFSSHFTLKKPSNSQQQPPVYKKFTFRVLCSSQPSRTPQNSNLI
STLVKILRVVPDWADKIQEGGMRKKRSLYKHETWVQHRSSLRHLRHLFSSFNSRVVLSLI
PPVIAFTSFAFVIACYNSAVSLHWLPEFFPILRASPQPYQLTAPALALLLVFRTEASYSR
FEAGKKAWTKVIAGTNDFARQVIACVDKRDDVLKEALLQYIMAFPVALKCHIVYDSDIAS
DLKNLLEADDLALVVSSKHRPRCIIGFISQSLQSLNLDGTILSQLESKITCFHEGIGVCE
QLLGIPIPLSYTRLTSRFLVLWHLTLPIILWDDCHWIVVPATFISAASLFCIEEVGVLIE
EPFPMLALDELCQRVHDNIHEAMANEKQIQEIVNSKRKRSFSEHSPNGWPTS*

Transcript Sequence

Transcript ID

PGSC0003DMT400055739
Transcript Infomation

pacid=37443318 locus=PGSC0003DMG400021644 ID=PGSC0003DMT400055739.v4.03 annot-version=v4.03
Sequence

ATGACAAATCCAAGAACCTTCTTCACCATTCAATCTCCAACAAATGCATCTTTTTCTTCC
CATTTTACCCTCAAGAAACCTTCAAATTCACAACAACAACCACCAGTCTATAAGAAGTTC
ACTTTTAGAGTTCTTTGTTCCTCTCAACCTTCAAGAACCCCACAGAATTCAAATCTAATT
TCTACCCTTGTCAAGATTCTACGCGTAGTACCGGATTGGGCTGACAAAATTCAAGAAGGG
GGTATGAGAAAAAAGAGATCTTTATACAAGCATGAGACTTGGGTGCAACATAGAAGTTCT
TTAAGGCATCTTAGGCATTTGTTTTCGAGCTTCAATTCGCGGGTTGTTTTGTCGTTGATA
CCTCCTGTTATAGCTTTTACTTCATTTGCATTTGTGATTGCTTGTTATAATTCAGCTGTT
TCATTGCATTGGTTGCCTGAGTTTTTCCCTATCTTGAGAGCTAGTCCACAGCCTTATCAG
TTGACAGCTCCAGCTCTGGCGCTTTTATTGGTGTTTAGGACGGAGGCGTCTTACTCGAGG
TTCGAAGCAGGGAAGAAGGCTTGGACTAAAGTCATTGCTGGAACTAATGATTTTGCTAGG
CAGGTCATTGCTTGTGTTGATAAGAGGGATGATGTGCTCAAAGAGGCACTTTTGCAGTAT
ATCATGGCATTTCCAGTTGCCTTAAAGTGCCACATAGTATATGACTCGGATATAGCAAGT
GATCTCAAAAACTTACTCGAGGCTGATGATCTAGCATTAGTTGTCAGTTCTAAGCATCGC
CCTCGTTGCATCATTGGATTCATCTCTCAGAGCCTTCAGTCATTAAACTTGGACGGGACA
ATACTGAGTCAGCTGGAGTCAAAGATTACTTGTTTCCATGAAGGTATTGGTGTATGTGAA
CAACTCTTGGGCATACCTATTCCCCTTTCATACACTCGATTGACGTCAAGGTTCTTAGTC
CTTTGGCATCTAACTCTTCCTATTATACTTTGGGATGATTGCCACTGGATTGTGGTTCCA
GCAACTTTCATAAGTGCGGCTTCCTTATTCTGCATCGAAGAGGTTGGTGTCCTTATCGAG
GAGCCATTTCCAATGCTTGCACTCGATGAGCTCTGTCAGCGTGTTCACGACAACATCCAC
GAAGCAATGGCAAACGAAAAGCAGATTCAAGAAATAGTAAACAGCAAAAGAAAGAGAAGT
TTTAGTGAACACTCTCCAAATGGTTGGCCAACCTCATAG