Plant GARDEN
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TOP > About the Species(Solanum tuberosum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400055673
CDS Infomation

pacid=37455177 polypeptide=PGSC0003DMP400037486 locus=PGSC0003DMG400021618 ID=PGSC0003DMT400055673.v4.03 annot-version=v4.03
Sequence

ATGCTTAGGTTACCAAATATTCCAAATCTAAACTTTCCTACATTTTCAGAAGTGTTTTTG
CCTAAGCCATGTATGGTAAAACCAAATGAAGGTATCTCAATTGCACCTGCACCACCTTTG
ACATTACAACAACTACTGCGTCTCAGTCCCAAACTATCACCTGCTAAGGAAATATCGAAG
AACATTGCTCCTAGTGTTACTACTAGTACTGATAATATTGCAATGGATCGTCGTTGTAGT
AATAGTAGTAGTAGTAGTAACACTGGGAGATTGTCTTCCATGTGGAGAGAAGTTCAAGGG
TCAAAAAACTGGGAAAACCTAGTAGATCCATTGGACTCTCTCCTCCGATCAGAGATTATT
CGTTATGGAGAGTTTGTGGCTGCTTGTTATGATGCATTTGATCTTGATCCAAATTCAAAA
AGATACTTAAATTGCAAGTATGGGAAGAGGAGGATGTTGAGTGAAGTAGGGTTAGGTGAA
TCAGGTTATCAAGTGACAAAATACATATATGCTACTCCAGACATAATAAATGTCTTCCCA
AATAATATTAGTATTGGCTCATCATGTGGAAAATGGATTGGTTATATTGCAGTATCAAAT
GATGAAGAAACAAAGAGACTTGGGAGGAGAGATGTGGTTGTTACTTTTCGTGGAACGGTC
ACTAGCCATGAATGGATAGCCAATTTGATGAGCTCATTAACTCCTGCTCGTCTTGATCCT
CATAATCCGAGACCTCAGGTTAAGGTTGAAGCTGGATTCTTGAGTTTGTACACTTCCAAT
GAGGACAAGAAGTTTGGCCTTGGAAGTTGTCGCGAGCAATTACTATCTGAGATAGGGAGA
GTAGTAAATAAGTATAAAGGAGAGGAACTGAGTATAACTTTAGCTGGACATAGCATGGGG
AGTGCATTAGCACTCTTACTAGCTTATGACATTGCAGAGTTAGGGTTGAATACTCATGAT
GATCACACTGTACCTGTAACCGTTTTTTCCTTTGGAGGGCCAAGAGTTGGAAACTCAGGC
TTCAAAGAGAGGTGTGAAGAGTTAGGTGTAAAAGTGTTGAGAATAACAAATGTAAATGAC
CCTATAACAAAACTTCCTGGGGTTTTTCTAAATGAGAATTTTAGGGTTTTGGGTGGAAAG
TATGAGGTACCATGGAGTTGCTCATGTTATGCACATGTTGGAGTTGAAATCTTGTTAGAT
TTTTTCAAGATGCATAATCCTTCTTGTGTACATGACTTGGCTACTTATCTTAGTTTGCTC
AAATGTCCAAAGAGGTTGCATGTTCAAAGAGAAGAAGACATTGATTTTATCAATAAAGCA
AAGGAGTTTGTCATTTCTGGATTAAACTTCAATGCAGCCTTGCAATGGAAAAATGCTGCT
ATGAATATGGTGAACATGGTTCAATCCCAAAGGACTTAG

Peptide Sequence

PEP ID

PGSC0003DMP400037486
PEP Infomation

pacid=37455177 transcript=PGSC0003DMT400055673 locus=PGSC0003DMG400021618 ID=PGSC0003DMT400055673.v4.03 annot-version=v4.03
Sequence

MLRLPNIPNLNFPTFSEVFLPKPCMVKPNEGISIAPAPPLTLQQLLRLSPKLSPAKEISK
NIAPSVTTSTDNIAMDRRCSNSSSSSNTGRLSSMWREVQGSKNWENLVDPLDSLLRSEII
RYGEFVAACYDAFDLDPNSKRYLNCKYGKRRMLSEVGLGESGYQVTKYIYATPDIINVFP
NNISIGSSCGKWIGYIAVSNDEETKRLGRRDVVVTFRGTVTSHEWIANLMSSLTPARLDP
HNPRPQVKVEAGFLSLYTSNEDKKFGLGSCREQLLSEIGRVVNKYKGEELSITLAGHSMG
SALALLLAYDIAELGLNTHDDHTVPVTVFSFGGPRVGNSGFKERCEELGVKVLRITNVND
PITKLPGVFLNENFRVLGGKYEVPWSCSCYAHVGVEILLDFFKMHNPSCVHDLATYLSLL
KCPKRLHVQREEDIDFINKAKEFVISGLNFNAALQWKNAAMNMVNMVQSQRT*

Transcript Sequence

Transcript ID

PGSC0003DMT400055673
Transcript Infomation

pacid=37455177 locus=PGSC0003DMG400021618 ID=PGSC0003DMT400055673.v4.03 annot-version=v4.03
Sequence

ATGCTTAGGTTACCAAATATTCCAAATCTAAACTTTCCTACATTTTCAGAAGTGTTTTTG
CCTAAGCCATGTATGGTAAAACCAAATGAAGGTATCTCAATTGCACCTGCACCACCTTTG
ACATTACAACAACTACTGCGTCTCAGTCCCAAACTATCACCTGCTAAGGAAATATCGAAG
AACATTGCTCCTAGTGTTACTACTAGTACTGATAATATTGCAATGGATCGTCGTTGTAGT
AATAGTAGTAGTAGTAGTAACACTGGGAGATTGTCTTCCATGTGGAGAGAAGTTCAAGGG
TCAAAAAACTGGGAAAACCTAGTAGATCCATTGGACTCTCTCCTCCGATCAGAGATTATT
CGTTATGGAGAGTTTGTGGCTGCTTGTTATGATGCATTTGATCTTGATCCAAATTCAAAA
AGATACTTAAATTGCAAGTATGGGAAGAGGAGGATGTTGAGTGAAGTAGGGTTAGGTGAA
TCAGGTTATCAAGTGACAAAATACATATATGCTACTCCAGACATAATAAATGTCTTCCCA
AATAATATTAGTATTGGCTCATCATGTGGAAAATGGATTGGTTATATTGCAGTATCAAAT
GATGAAGAAACAAAGAGACTTGGGAGGAGAGATGTGGTTGTTACTTTTCGTGGAACGGTC
ACTAGCCATGAATGGATAGCCAATTTGATGAGCTCATTAACTCCTGCTCGTCTTGATCCT
CATAATCCGAGACCTCAGGTTAAGGTTGAAGCTGGATTCTTGAGTTTGTACACTTCCAAT
GAGGACAAGAAGTTTGGCCTTGGAAGTTGTCGCGAGCAATTACTATCTGAGATAGGGAGA
GTAGTAAATAAGTATAAAGGAGAGGAACTGAGTATAACTTTAGCTGGACATAGCATGGGG
AGTGCATTAGCACTCTTACTAGCTTATGACATTGCAGAGTTAGGGTTGAATACTCATGAT
GATCACACTGTACCTGTAACCGTTTTTTCCTTTGGAGGGCCAAGAGTTGGAAACTCAGGC
TTCAAAGAGAGGTGTGAAGAGTTAGGTGTAAAAGTGTTGAGAATAACAAATGTAAATGAC
CCTATAACAAAACTTCCTGGGGTTTTTCTAAATGAGAATTTTAGGGTTTTGGGTGGAAAG
TATGAGGTACCATGGAGTTGCTCATGTTATGCACATGTTGGAGTTGAAATCTTGTTAGAT
TTTTTCAAGATGCATAATCCTTCTTGTGTACATGACTTGGCTACTTATCTTAGTTTGCTC
AAATGTCCAAAGAGGTTGCATGTTCAAAGAGAAGAAGACATTGATTTTATCAATAAAGCA
AAGGAGTTTGTCATTTCTGGATTAAACTTCAATGCAGCCTTGCAATGGAAAAATGCTGCT
ATGAATATGGTGAACATGGTTCAATCCCAAAGGACTTAG