Plant GARDEN
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TOP > About the Species(Solanum tuberosum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400055642
CDS Infomation

pacid=37457712 polypeptide=PGSC0003DMP400037460 locus=PGSC0003DMG400021607 ID=PGSC0003DMT400055642.v4.03 annot-version=v4.03
Sequence

ATGCCTCTTGAAAGGGTTGAGCAATTGGATTACATGGCAGATGACCAGGAGGGGACTGAT
TCATGTGATGAATTTGAGGGGGAGTTGGATAATGAGGAAATAAACCTTGATGACGATGAT
ATGCCAACAAAAGTGACTGATACATCAGCTGCACAAGCAAGAAAAGGGAAGGATATACAA
GGTATCACATGGGAGGGATTGAATGTAACCAGGCAAAGCTACAGATTGACAAGGCTCGAA
CAGTACAGAAATTATGAGAACATCCCTTTGTCAGGGGAAGCTGTGGATAAGGAATGCAAA
CAAGTGGAGAAGGGTGGTAACTACTACGAATTCTTTTACAATGCAAGATCCGTGAAGCCT
ACGATACTCCATTTTCAGCTAAGAAACTTGGTCTGGGCAACTTCAAAACATGATGTGTAT
TTGATTTCAAACGATTCACTTATGCATTGGTCATCAATTTCCCACAACCTCTCAGAAGTT
CTCAACTTCTCTGGACGTATAGTACCGACAGAGAAATATGCAGGAAATTTGTTAGAGGGT
CTGACACTGACCCAAATCAGCACGATGGCGGTGAAGAACCGTTTTGTGGTTGCTGGAGGC
TTCCAAGGAGAACTCATTTGTAAGAGTTTGGACAAGCCAGGGGTTAGCTTCTGTGCAAGG
ACCACTTATGAGGATAATGCTATCACAAATGCCGTTGAGATATATGAAAGCGTCAGTTGT
GGGCCTCGTTTTATGGCAGCCAACAACGACTGTGGTGTGAGGGTGTATGACATGGAGAAG
TTTCAGCAGATGAACCACTTCCGCTTCCCTTGGCCAGTGAATGTCAGTTTTTTTACGTGC
TTTTGCTGCAATCTTTTGTTCTTCCCTTTTCTTTGCTTTTTTTTGAACTTGGTAACTTTG
TATTATATCACAAAACAATACATGGGTTGTATTGAAACCTTATATACAAATGTACTCCCA
ATTTCACTTCTCTATGACTAG

Peptide Sequence

PEP ID

PGSC0003DMP400037460
PEP Infomation

pacid=37457712 transcript=PGSC0003DMT400055642 locus=PGSC0003DMG400021607 ID=PGSC0003DMT400055642.v4.03 annot-version=v4.03
Sequence

MPLERVEQLDYMADDQEGTDSCDEFEGELDNEEINLDDDDMPTKVTDTSAAQARKGKDIQ
GITWEGLNVTRQSYRLTRLEQYRNYENIPLSGEAVDKECKQVEKGGNYYEFFYNARSVKP
TILHFQLRNLVWATSKHDVYLISNDSLMHWSSISHNLSEVLNFSGRIVPTEKYAGNLLEG
LTLTQISTMAVKNRFVVAGGFQGELICKSLDKPGVSFCARTTYEDNAITNAVEIYESVSC
GPRFMAANNDCGVRVYDMEKFQQMNHFRFPWPVNVSFFTCFCCNLLFFPFLCFFLNLVTL
YYITKQYMGCIETLYTNVLPISLLYD*

Transcript Sequence

Transcript ID

PGSC0003DMT400055642
Transcript Infomation

pacid=37457712 locus=PGSC0003DMG400021607 ID=PGSC0003DMT400055642.v4.03 annot-version=v4.03
Sequence

ATGCCTCTTGAAAGGGTTGAGCAATTGGATTACATGGCAGATGACCAGGAGGGGACTGAT
TCATGTGATGAATTTGAGGGGGAGTTGGATAATGAGGAAATAAACCTTGATGACGATGAT
ATGCCAACAAAAGTGACTGATACATCAGCTGCACAAGCAAGAAAAGGGAAGGATATACAA
GGTATCACATGGGAGGGATTGAATGTAACCAGGCAAAGCTACAGATTGACAAGGCTCGAA
CAGTACAGAAATTATGAGAACATCCCTTTGTCAGGGGAAGCTGTGGATAAGGAATGCAAA
CAAGTGGAGAAGGGTGGTAACTACTACGAATTCTTTTACAATGCAAGATCCGTGAAGCCT
ACGATACTCCATTTTCAGCTAAGAAACTTGGTCTGGGCAACTTCAAAACATGATGTGTAT
TTGATTTCAAACGATTCACTTATGCATTGGTCATCAATTTCCCACAACCTCTCAGAAGTT
CTCAACTTCTCTGGACGTATAGTACCGACAGAGAAATATGCAGGAAATTTGTTAGAGGGT
CTGACACTGACCCAAATCAGCACGATGGCGGTGAAGAACCGTTTTGTGGTTGCTGGAGGC
TTCCAAGGAGAACTCATTTGTAAGAGTTTGGACAAGCCAGGGGTTAGCTTCTGTGCAAGG
ACCACTTATGAGGATAATGCTATCACAAATGCCGTTGAGATATATGAAAGCGTCAGTTGT
GGGCCTCGTTTTATGGCAGCCAACAACGACTGTGGTGTGAGGGTGTATGACATGGAGAAG
TTTCAGCAGATGAACCACTTCCGCTTCCCTTGGCCAGTGAATGTCAGTTTTTTTACGTGC
TTTTGCTGCAATCTTTTGTTCTTCCCTTTTCTTTGCTTTTTTTTGAACTTGGTAACTTTG
TATTATATCACAAAACAATACATGGGTTGTATTGAAACCTTATATACAAATGTACTCCCA
ATTTCACTTCTCTATGACTAG