Plant GARDEN
How To ▶︎

JA

EN

TOP > About the Species(Solanum tuberosum ) > genome data >Gene sequences

Search

By Species By Keywords Genes By Markers By Traits

Let’s Analyze!!

SNP Detection
(lang=JA only) Sequences Other Tools

Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400055528
CDS Infomation

pacid=37457255 polypeptide=PGSC0003DMP400037386 locus=PGSC0003DMG400021563 ID=PGSC0003DMT400055528.v4.03 annot-version=v4.03
Sequence

ATGGGGTTTTTTGGAAGTTTATTAGGAATTCTTGGTTTTGGAGTTGGAATTTCGATTGGT
TTGATTGTGGGGTATTTTTTGTTCATATACTTTGAGGCCAGAGATGTTAAGGATTATCCA
GAAAGTTCACCATTTGATGAAATTGAGCCAAACTCATTAGTTGATCTTCTACCTGAACTT
CCCTTATGGGTGATGAATCCAGACTACGAGCGGGTTAACTGGTTCAATGAGTTTATAGCT
AATATGTGGCCTTATCTTGACAAGGCAATTTGTGGAATTATTAAAAGCACATCCGAACCT
ATTTTTGCAGAGTATATTGGAAAATATCAGATAAAATCTATCGAGTTTGAGCAACTTACT
CTTGGAACAATTCCTCCTAGATTGCATGGTATTAAAGTATATGATTCCAATGAAAAGGAG
CTAGTATTTGAGTTTGCGGTCAGATGGGCTGGAAATCCAAATATAGTTGTGGCATTGAAG
TTATTATCTCTAAAAATCTCGGCACAGTTGGTAGATTTCCAAGTTGCTGCTACAGCAAGG
GCGACACTGAAACCTTTTGTCCCAACCTTCCCATGCTTTTCAAACATAGTAGTATCATTG
ACAAAGAAGCCAGAGGTAGACTTTGGGCTAAAAGTAATTGGAGGAGATCTCATGGCAATC
CCCGGTTTACACCATTTTGTTCAGGAAACTATAAGCAAGCAAGTCGCCAGACTTTACCTC
TGGCCACAAACACTTGACATACCAATTCTTGACAGTTCAATAGGAGCTGTGAAGAAGCCT
GTTGGAATACTACACGTGAAGGTTCTGAGAGCGCAGAAACTTTTGAACATGGACTTTTTG
AGTAAATCAGATCCATATGTTAAACTCAGCTTAGGTGGGGACATGCTTCCAGCAAAGAAG
ACTACTGTAAAGATGAACAGTCTAGATCCCGTGTGGGATGAGGATTTCAAATTGACCGTT
AAGGATCCCGAGGCTCAAGTTCTGCAGCTGCATCTATATGACTGGGAAAAGATTGGGGCA
CATGACAAGTTGGGAATGCAAGTAGTGCCACTGAAATTGCTCAAGCCATATGAGAAGAAA
GAACTAACTCTTGATTTGGTCCACAGCTTAAACCCAAACGACCCTCAGAATAAGAAGCCG
CGAGGCCGACTTATGTTGGAAATGTCCTTCATCCCTTTCCAAGAAGATAGTATAAAGTTT
AGTGGACCTCTTAGTTTTCACGAAAGAAAGGAGAGTATTTCAAGCCTTTCAGATGACATT
TCCTTACGTGGAGCAGGTTTGCTTTTGGTTACCGTTATTGCTGCTGAAGATGTAGAAGGG
AAGAACCATACCAATCCTTATGCAGTCGTAGTGCTTCGAGGAGAAAAAAAGAAAACTAAG
GCAAGGAACAAAACGTGGAATCCAAAATGGGAAGAAGAATTCCAGTTTATGTTGGAAGAC
GCTCCATTGAAGGAGCTAATCCATATTGAAGTCAAGAGCAAGAAGAGAAGATTTGGTTTT
AGGTCTAAGGAGTTACTTGGCTATGTCGATATCCAACTGAAGGATGTTATCTTCAATGGA
CGTATCAACGAGAAGTACCATCTCATCAATTCTAAAGATGGGATTTTACATGTTGACATC
AGATGGAAGGTGATCTAA

Peptide Sequence

PEP ID

PGSC0003DMP400037386
PEP Infomation

pacid=37457255 transcript=PGSC0003DMT400055528 locus=PGSC0003DMG400021563 ID=PGSC0003DMT400055528.v4.03 annot-version=v4.03
Sequence

MGFFGSLLGILGFGVGISIGLIVGYFLFIYFEARDVKDYPESSPFDEIEPNSLVDLLPEL
PLWVMNPDYERVNWFNEFIANMWPYLDKAICGIIKSTSEPIFAEYIGKYQIKSIEFEQLT
LGTIPPRLHGIKVYDSNEKELVFEFAVRWAGNPNIVVALKLLSLKISAQLVDFQVAATAR
ATLKPFVPTFPCFSNIVVSLTKKPEVDFGLKVIGGDLMAIPGLHHFVQETISKQVARLYL
WPQTLDIPILDSSIGAVKKPVGILHVKVLRAQKLLNMDFLSKSDPYVKLSLGGDMLPAKK
TTVKMNSLDPVWDEDFKLTVKDPEAQVLQLHLYDWEKIGAHDKLGMQVVPLKLLKPYEKK
ELTLDLVHSLNPNDPQNKKPRGRLMLEMSFIPFQEDSIKFSGPLSFHERKESISSLSDDI
SLRGAGLLLVTVIAAEDVEGKNHTNPYAVVVLRGEKKKTKARNKTWNPKWEEEFQFMLED
APLKELIHIEVKSKKRRFGFRSKELLGYVDIQLKDVIFNGRINEKYHLINSKDGILHVDI
RWKVI*

Transcript Sequence

Transcript ID

PGSC0003DMT400055528
Transcript Infomation

pacid=37457255 locus=PGSC0003DMG400021563 ID=PGSC0003DMT400055528.v4.03 annot-version=v4.03
Sequence

ATGGGGTTTTTTGGAAGTTTATTAGGAATTCTTGGTTTTGGAGTTGGAATTTCGATTGGT
TTGATTGTGGGGTATTTTTTGTTCATATACTTTGAGGCCAGAGATGTTAAGGATTATCCA
GAAAGTTCACCATTTGATGAAATTGAGCCAAACTCATTAGTTGATCTTCTACCTGAACTT
CCCTTATGGGTGATGAATCCAGACTACGAGCGGGTTAACTGGTTCAATGAGTTTATAGCT
AATATGTGGCCTTATCTTGACAAGGCAATTTGTGGAATTATTAAAAGCACATCCGAACCT
ATTTTTGCAGAGTATATTGGAAAATATCAGATAAAATCTATCGAGTTTGAGCAACTTACT
CTTGGAACAATTCCTCCTAGATTGCATGGTATTAAAGTATATGATTCCAATGAAAAGGAG
CTAGTATTTGAGTTTGCGGTCAGATGGGCTGGAAATCCAAATATAGTTGTGGCATTGAAG
TTATTATCTCTAAAAATCTCGGCACAGTTGGTAGATTTCCAAGTTGCTGCTACAGCAAGG
GCGACACTGAAACCTTTTGTCCCAACCTTCCCATGCTTTTCAAACATAGTAGTATCATTG
ACAAAGAAGCCAGAGGTAGACTTTGGGCTAAAAGTAATTGGAGGAGATCTCATGGCAATC
CCCGGTTTACACCATTTTGTTCAGGAAACTATAAGCAAGCAAGTCGCCAGACTTTACCTC
TGGCCACAAACACTTGACATACCAATTCTTGACAGTTCAATAGGAGCTGTGAAGAAGCCT
GTTGGAATACTACACGTGAAGGTTCTGAGAGCGCAGAAACTTTTGAACATGGACTTTTTG
AGTAAATCAGATCCATATGTTAAACTCAGCTTAGGTGGGGACATGCTTCCAGCAAAGAAG
ACTACTGTAAAGATGAACAGTCTAGATCCCGTGTGGGATGAGGATTTCAAATTGACCGTT
AAGGATCCCGAGGCTCAAGTTCTGCAGCTGCATCTATATGACTGGGAAAAGATTGGGGCA
CATGACAAGTTGGGAATGCAAGTAGTGCCACTGAAATTGCTCAAGCCATATGAGAAGAAA
GAACTAACTCTTGATTTGGTCCACAGCTTAAACCCAAACGACCCTCAGAATAAGAAGCCG
CGAGGCCGACTTATGTTGGAAATGTCCTTCATCCCTTTCCAAGAAGATAGTATAAAGTTT
AGTGGACCTCTTAGTTTTCACGAAAGAAAGGAGAGTATTTCAAGCCTTTCAGATGACATT
TCCTTACGTGGAGCAGGTTTGCTTTTGGTTACCGTTATTGCTGCTGAAGATGTAGAAGGG
AAGAACCATACCAATCCTTATGCAGTCGTAGTGCTTCGAGGAGAAAAAAAGAAAACTAAG
GCAAGGAACAAAACGTGGAATCCAAAATGGGAAGAAGAATTCCAGTTTATGTTGGAAGAC
GCTCCATTGAAGGAGCTAATCCATATTGAAGTCAAGAGCAAGAAGAGAAGATTTGGTTTT
AGGTCTAAGGAGTTACTTGGCTATGTCGATATCCAACTGAAGGATGTTATCTTCAATGGA
CGTATCAACGAGAAGTACCATCTCATCAATTCTAAAGATGGGATTTTACATGTTGACATC
AGATGGAAGGTGATCTAA