Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400055514
CDS Infomation

pacid=37454647 polypeptide=PGSC0003DMP400037374 locus=PGSC0003DMG400021556 ID=PGSC0003DMT400055514.v4.03 annot-version=v4.03
Sequence

ATGAGAAGTGTAGAATTCAAGGTTATTGAGACTGACCCTCCTGAATACTGTGTTGTCGCC
CCAGATACTGAGATATTCTGTGAGGGTGAACCTGTGAACAGAGAAGATGAGAATCGGCTA
GATGAGATTGGCTATGATGATGTTGGTGGCGTGCGTAAACAAATGGCTCAGATCCGCGAG
CTTGTTGAGCTTCCGTTGAGGCATCCACAACTGTTCAAATCTATTGGTGTGAAACCTCCC
AAAGGAATTCTCTTGTATGGACCTCCTGGATCAGGGAAGACATTGATAGCTCGAGCAGTT
GCTAATGAGACTGGCGCATTCTTCTTTTGTATTAATGGGCCAGAGATCATGTCCAAATTG
GCGGGAGAAAGTGAAAGTAATCTCAGGAAAGCATTTGAGGAAGCTGAGAAGAATGCGCCT
TCAATTATTTTTATTGATGAAATTGATTCAATAGCTCCTAAACGTGAGAAGACTCATGGA
GAGGTTGAGAGGAGGATTGTTTCTCAGCTCTTGACTCTCATGGATGGTCTCAAATCACGT
GCCCACGTAATTGTCATGGGTGCCACTAATCGCCCTAATAGTATTGACCCCGCCCTAAGA
AGGTTTGGCAGATTTGATAGGGAGATAGATATTGGTGTCCCGGATGAAGTTGGGCGTCTT
GAGGTGCTTCGTATCCACACAAAGAACATGAAGCTCGCCGAAGATGTTGATTTGGAAAGA
ATTGGCAAAGAAACACACGGTTATGTTGGTGCGGATTTGGCAGCTTTGTGTACCGAGGCT
GCACTTCAGTGCATCAGAGAGAAGATGGATGTGATTGATTTGGAAGATGAATCTATTGAT
GCAGAGATATTAAACTCCATGGCTGTGACTAATGAGCACTTCTCAACTGCCCTTGGGACA
AGCAATCCATCTGCCCTGCGCGAAACTGTTGTTGAAGTTCCTAATGTTTCCTGGGAGGAC
ATTGGAGGCCTTGAGAATGTCAAGCGTGAGCTCCAAGAGACTGTTCAATATCCTGTGGAA
CATCCCGAGAAGTTCGAGAAGTTTGGTATGTCTCCTTCTAAGGGTGTTCTCTTCTATGGG
CCACCTGGATGTGGGAAAACTTTGTTGGCGAAGGCTATTGCAAATGAATGCCAGGCCAAT
TTTATTAGTATCAAGGGTCCGGAATTGCTTACCATGTGGTTTGGAGAGAGCGAAGCCAAT
GTTAGAGAAATATTCGACAAGGCTCGAGGGTCTGCTCCTTGTGTCCTGTTTTTTGATGAG
TTGGACTCGATTGCTACTCAGAGAGGTGGTAGCAGTGGAGATGCCGGGGGAGCTGCTGAT
AGAGTTTTGAATCAACTCCTCACTGAAATGGATGGTATGAATGCCAAGAAGACGGTTTTC
ATCATCGGTGCCACCAACAGGCCTGACATTATTGATCCTGCACTTCTACGTCCTGGTCGT
CTTGACCAATTGATTTACATTCCTCTTCCTGACGAGGATTCCCGCCATCAAATTTTCAAG
GCATGCCTGCGGAAATCACCCCTTTCTAAGGATATCGATCTCAGAGCTCTTGCAAAATAT
ACGCAAGGGTTCAGCGGAGCTGACATTACAGAGATCTGCCAACGTGCATGCAAATACGCT
ATCCGAGAGAACATTGAGAAAGATATTGAGAGGGAGAGAAGGAGAAGGGATAATCCTGAA
GCCATGGAGGAAGACGTTGACGATGAGGTATCCGAGATCAAGCCTGCTCACTTTGAGGAA
TCAATGAAGTATGCTAGGAGAAGTGTCAGTGATGCTGATATCCGCAAGTACCAGGCGTTT
GCTCAGACGTTGCAGCAGTCCCGAGGGTTTGGTTCTGAGTTCCGGTTTGCAGAGGCCACC
ACCGGTCCCACCACCGGAACTGCTGATCCCTTTGCAACTTCTGCTGGTGGTGCAGATGAA
GATGACCTGTATAGCTAG

Peptide Sequence

PEP ID

PGSC0003DMP400037374
PEP Infomation

pacid=37454647 transcript=PGSC0003DMT400055514 locus=PGSC0003DMG400021556 ID=PGSC0003DMT400055514.v4.03 annot-version=v4.03
Sequence

MRSVEFKVIETDPPEYCVVAPDTEIFCEGEPVNREDENRLDEIGYDDVGGVRKQMAQIRE
LVELPLRHPQLFKSIGVKPPKGILLYGPPGSGKTLIARAVANETGAFFFCINGPEIMSKL
AGESESNLRKAFEEAEKNAPSIIFIDEIDSIAPKREKTHGEVERRIVSQLLTLMDGLKSR
AHVIVMGATNRPNSIDPALRRFGRFDREIDIGVPDEVGRLEVLRIHTKNMKLAEDVDLER
IGKETHGYVGADLAALCTEAALQCIREKMDVIDLEDESIDAEILNSMAVTNEHFSTALGT
SNPSALRETVVEVPNVSWEDIGGLENVKRELQETVQYPVEHPEKFEKFGMSPSKGVLFYG
PPGCGKTLLAKAIANECQANFISIKGPELLTMWFGESEANVREIFDKARGSAPCVLFFDE
LDSIATQRGGSSGDAGGAADRVLNQLLTEMDGMNAKKTVFIIGATNRPDIIDPALLRPGR
LDQLIYIPLPDEDSRHQIFKACLRKSPLSKDIDLRALAKYTQGFSGADITEICQRACKYA
IRENIEKDIERERRRRDNPEAMEEDVDDEVSEIKPAHFEESMKYARRSVSDADIRKYQAF
AQTLQQSRGFGSEFRFAEATTGPTTGTADPFATSAGGADEDDLYS*

Transcript Sequence

Transcript ID

PGSC0003DMT400055514
Transcript Infomation

pacid=37454647 locus=PGSC0003DMG400021556 ID=PGSC0003DMT400055514.v4.03 annot-version=v4.03
Sequence

ATGAGAAGTGTAGAATTCAAGGTTATTGAGACTGACCCTCCTGAATACTGTGTTGTCGCC
CCAGATACTGAGATATTCTGTGAGGGTGAACCTGTGAACAGAGAAGATGAGAATCGGCTA
GATGAGATTGGCTATGATGATGTTGGTGGCGTGCGTAAACAAATGGCTCAGATCCGCGAG
CTTGTTGAGCTTCCGTTGAGGCATCCACAACTGTTCAAATCTATTGGTGTGAAACCTCCC
AAAGGAATTCTCTTGTATGGACCTCCTGGATCAGGGAAGACATTGATAGCTCGAGCAGTT
GCTAATGAGACTGGCGCATTCTTCTTTTGTATTAATGGGCCAGAGATCATGTCCAAATTG
GCGGGAGAAAGTGAAAGTAATCTCAGGAAAGCATTTGAGGAAGCTGAGAAGAATGCGCCT
TCAATTATTTTTATTGATGAAATTGATTCAATAGCTCCTAAACGTGAGAAGACTCATGGA
GAGGTTGAGAGGAGGATTGTTTCTCAGCTCTTGACTCTCATGGATGGTCTCAAATCACGT
GCCCACGTAATTGTCATGGGTGCCACTAATCGCCCTAATAGTATTGACCCCGCCCTAAGA
AGGTTTGGCAGATTTGATAGGGAGATAGATATTGGTGTCCCGGATGAAGTTGGGCGTCTT
GAGGTGCTTCGTATCCACACAAAGAACATGAAGCTCGCCGAAGATGTTGATTTGGAAAGA
ATTGGCAAAGAAACACACGGTTATGTTGGTGCGGATTTGGCAGCTTTGTGTACCGAGGCT
GCACTTCAGTGCATCAGAGAGAAGATGGATGTGATTGATTTGGAAGATGAATCTATTGAT
GCAGAGATATTAAACTCCATGGCTGTGACTAATGAGCACTTCTCAACTGCCCTTGGGACA
AGCAATCCATCTGCCCTGCGCGAAACTGTTGTTGAAGTTCCTAATGTTTCCTGGGAGGAC
ATTGGAGGCCTTGAGAATGTCAAGCGTGAGCTCCAAGAGACTGTTCAATATCCTGTGGAA
CATCCCGAGAAGTTCGAGAAGTTTGGTATGTCTCCTTCTAAGGGTGTTCTCTTCTATGGG
CCACCTGGATGTGGGAAAACTTTGTTGGCGAAGGCTATTGCAAATGAATGCCAGGCCAAT
TTTATTAGTATCAAGGGTCCGGAATTGCTTACCATGTGGTTTGGAGAGAGCGAAGCCAAT
GTTAGAGAAATATTCGACAAGGCTCGAGGGTCTGCTCCTTGTGTCCTGTTTTTTGATGAG
TTGGACTCGATTGCTACTCAGAGAGGTGGTAGCAGTGGAGATGCCGGGGGAGCTGCTGAT
AGAGTTTTGAATCAACTCCTCACTGAAATGGATGGTATGAATGCCAAGAAGACGGTTTTC
ATCATCGGTGCCACCAACAGGCCTGACATTATTGATCCTGCACTTCTACGTCCTGGTCGT
CTTGACCAATTGATTTACATTCCTCTTCCTGACGAGGATTCCCGCCATCAAATTTTCAAG
GCATGCCTGCGGAAATCACCCCTTTCTAAGGATATCGATCTCAGAGCTCTTGCAAAATAT
ACGCAAGGGTTCAGCGGAGCTGACATTACAGAGATCTGCCAACGTGCATGCAAATACGCT
ATCCGAGAGAACATTGAGAAAGATATTGAGAGGGAGAGAAGGAGAAGGGATAATCCTGAA
GCCATGGAGGAAGACGTTGACGATGAGGTATCCGAGATCAAGCCTGCTCACTTTGAGGAA
TCAATGAAGTATGCTAGGAGAAGTGTCAGTGATGCTGATATCCGCAAGTACCAGGCGTTT
GCTCAGACGTTGCAGCAGTCCCGAGGGTTTGGTTCTGAGTTCCGGTTTGCAGAGGCCACC
ACCGGTCCCACCACCGGAACTGCTGATCCCTTTGCAACTTCTGCTGGTGGTGCAGATGAA
GATGACCTGTATAGCTAG