Plant GARDEN
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TOP > About the Species(Solanum tuberosum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400055510
CDS Infomation

pacid=37456022 polypeptide=PGSC0003DMP400037370 locus=PGSC0003DMG400021553 ID=PGSC0003DMT400055510.v4.03 annot-version=v4.03
Sequence

ATGAACTTTGAACCACACAGCGTGGTTGCTCTCGCCAGAAAGGCTTTGTTGGCATCAAGA
GAGGCAGCTTTATTAGCTGAAGACTCCAAATTACTTGATGATTCTAATTTTCCGAATTTC
CTATCCACAAATTTGGTTGATGATAAACTGAAAGAGCAACGGACAGTAAGGTCAACACGT
TTTACAGAGAGGCAGTCTAGAAAAAGGGGAGCTCCAAAGCCAACACAACAAGTTCAGGAG
ACAAATCGTTCAGGCAGGCCAGATGTGCGGAGAAAAGTGAACGAATCTATTGATCTAAAT
GATCCTCTTCGAATGTTCCTATGGGGTCCCGAAACTAAACAACTTTTAACCGCCAAAGAG
GAGTCTGAATTGATTGTCAAGATACAGATATCCATGAAATTACAAGAAGTGAAGCATCAG
CTTCAGATTCAGTTTGCTCATGAACCAACGTCTGTTGAGTGGGCTGAAGCTGCAGGGATT
ACTTCTCGAGAATTGAAATCACAACTTCTTTCCGGCAAGAGCAGCCGTGAGAAATTAATT
AATGCCAATTTGCGAATGGTGGTTCATATTGCTAAGCAATATCAAGGACGTGGTCTCAAC
CTTCAGGATCTATTGCAGGAGGGAAGCATGGGACTTATGAAAAGTGTCGAGAAGTTCAAG
CCTCAAGCTGGTTGTCGATTTCCTACCTATGCATACTGGTGGATAAGGCAATCAGTTAGG
AAGGCCATATTTCAACACTCTAGGACAATCCGTTTGCCCGAAAATGTGTATGCGCTTCTG
TCTAAAGTAAAAGACGCCAAAAAAGAATGCATTCAACAAGGCAATCGCTATCCAACCAAA
GAAGACATTGCATCATGTGCTGGAATGAGTGTGGAAAGGTTGCAGAATCTGCTTTCAAAT
GTTAGAACACCTCTTTCAATGCAACAGTCAGTGTGGTCGGATCAAGATACTACTTTCCAG
GTGATGATTCATTGCGCCACTTCATGCTTTCTTACTAAGTACGCAGTGATTTCTTTTCAT
TTGTCCAAGCCTTGGCTCCCCTCCCGATATTCCCTCTTTTCAGAGTCAGAAGGATATTAC
CCTATAATGTTTTTGTGGCTTGCATGTGATACTGATTACTGGCTAGTCCAAGGGGCTATA
AAATCTGGTAGAAAATAG

Peptide Sequence

PEP ID

PGSC0003DMP400037370
PEP Infomation

pacid=37456022 transcript=PGSC0003DMT400055510 locus=PGSC0003DMG400021553 ID=PGSC0003DMT400055510.v4.03 annot-version=v4.03
Sequence

MNFEPHSVVALARKALLASREAALLAEDSKLLDDSNFPNFLSTNLVDDKLKEQRTVRSTR
FTERQSRKRGAPKPTQQVQETNRSGRPDVRRKVNESIDLNDPLRMFLWGPETKQLLTAKE
ESELIVKIQISMKLQEVKHQLQIQFAHEPTSVEWAEAAGITSRELKSQLLSGKSSREKLI
NANLRMVVHIAKQYQGRGLNLQDLLQEGSMGLMKSVEKFKPQAGCRFPTYAYWWIRQSVR
KAIFQHSRTIRLPENVYALLSKVKDAKKECIQQGNRYPTKEDIASCAGMSVERLQNLLSN
VRTPLSMQQSVWSDQDTTFQVMIHCATSCFLTKYAVISFHLSKPWLPSRYSLFSESEGYY
PIMFLWLACDTDYWLVQGAIKSGRK*

Transcript Sequence

Transcript ID

PGSC0003DMT400055510
Transcript Infomation

pacid=37456022 locus=PGSC0003DMG400021553 ID=PGSC0003DMT400055510.v4.03 annot-version=v4.03
Sequence

ATGAACTTTGAACCACACAGCGTGGTTGCTCTCGCCAGAAAGGCTTTGTTGGCATCAAGA
GAGGCAGCTTTATTAGCTGAAGACTCCAAATTACTTGATGATTCTAATTTTCCGAATTTC
CTATCCACAAATTTGGTTGATGATAAACTGAAAGAGCAACGGACAGTAAGGTCAACACGT
TTTACAGAGAGGCAGTCTAGAAAAAGGGGAGCTCCAAAGCCAACACAACAAGTTCAGGAG
ACAAATCGTTCAGGCAGGCCAGATGTGCGGAGAAAAGTGAACGAATCTATTGATCTAAAT
GATCCTCTTCGAATGTTCCTATGGGGTCCCGAAACTAAACAACTTTTAACCGCCAAAGAG
GAGTCTGAATTGATTGTCAAGATACAGATATCCATGAAATTACAAGAAGTGAAGCATCAG
CTTCAGATTCAGTTTGCTCATGAACCAACGTCTGTTGAGTGGGCTGAAGCTGCAGGGATT
ACTTCTCGAGAATTGAAATCACAACTTCTTTCCGGCAAGAGCAGCCGTGAGAAATTAATT
AATGCCAATTTGCGAATGGTGGTTCATATTGCTAAGCAATATCAAGGACGTGGTCTCAAC
CTTCAGGATCTATTGCAGGAGGGAAGCATGGGACTTATGAAAAGTGTCGAGAAGTTCAAG
CCTCAAGCTGGTTGTCGATTTCCTACCTATGCATACTGGTGGATAAGGCAATCAGTTAGG
AAGGCCATATTTCAACACTCTAGGACAATCCGTTTGCCCGAAAATGTGTATGCGCTTCTG
TCTAAAGTAAAAGACGCCAAAAAAGAATGCATTCAACAAGGCAATCGCTATCCAACCAAA
GAAGACATTGCATCATGTGCTGGAATGAGTGTGGAAAGGTTGCAGAATCTGCTTTCAAAT
GTTAGAACACCTCTTTCAATGCAACAGTCAGTGTGGTCGGATCAAGATACTACTTTCCAG
GTGATGATTCATTGCGCCACTTCATGCTTTCTTACTAAGTACGCAGTGATTTCTTTTCAT
TTGTCCAAGCCTTGGCTCCCCTCCCGATATTCCCTCTTTTCAGAGTCAGAAGGATATTAC
CCTATAATGTTTTTGTGGCTTGCATGTGATACTGATTACTGGCTAGTCCAAGGGGCTATA
AAATCTGGTAGAAAATAG